RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 TRIM43Q96BQ3 446 aaPredicted RBP21.71■■□□□ 1.07
CLDND1-217ENST00000508071 XPNPEP3Q9NQH7 507 aa21.71■■□□□ 1.07
CLDND1-217ENST00000508071 TLE2Q04725 743 aa21.7■■□□□ 1.06
CLDND1-217ENST00000508071 TMEM132BQ14DG7 1078 aa21.7■■□□□ 1.06
CLDND1-217ENST00000508071 SIAH1Q8IUQ4 282 aa21.7■■□□□ 1.06
CLDND1-217ENST00000508071 MMP19Q99542 508 aa21.7■■□□□ 1.06
CLDND1-217ENST00000508071 ARMT1Q9H993 441 aa21.7■■□□□ 1.06
CLDND1-217ENST00000508071 PHF24Q9UPV7 400 aa21.7■■□□□ 1.06
CLDND1-217ENST00000508071 TACC3Q9Y6A5 838 aa21.7■■□□□ 1.06
CLDND1-217ENST00000508071 PLXNA1Q9UIW2 1896 aa21.7■■□□□ 1.06
CLDND1-217ENST00000508071 IFIT2P09913 472 aaKnown RBP21.69■■□□□ 1.06
CLDND1-217ENST00000508071 RNF180Q86T96 592 aa21.69■■□□□ 1.06
CLDND1-217ENST00000508071 AMOTL1Q8IY63 956 aa21.69■■□□□ 1.06
CLDND1-217ENST00000508071 CCDC17Q96LX7 622 aa21.69■■□□□ 1.06
CLDND1-217ENST00000508071 ATP8A2Q9NTI2 1148 aa21.69■■□□□ 1.06
CLDND1-217ENST00000508071 CDH23Q9H251 3354 aa21.69■■□□□ 1.06
CLDND1-217ENST00000508071 APBB1O00213 710 aa21.68■■□□□ 1.06
CLDND1-217ENST00000508071 MBD4O95243 580 aa21.68■■□□□ 1.06
CLDND1-217ENST00000508071 CLTBP09497 229 aa21.68■■□□□ 1.06
CLDND1-217ENST00000508071 MYLIPQ8WY64 445 aa21.68■■□□□ 1.06
CLDND1-217ENST00000508071 KIF1BPQ96EK5 621 aa21.68■■□□□ 1.06
CLDND1-217ENST00000508071 TINF2Q9BSI4 451 aa21.68■■□□□ 1.06
CLDND1-217ENST00000508071 BCL11AQ9H165 835 aa21.68■■□□□ 1.06
CLDND1-217ENST00000508071 TTYH1Q9H313 450 aaPredicted RBP21.68■■□□□ 1.06
CLDND1-217ENST00000508071 PRKAB2O43741 272 aa21.67■■□□□ 1.06
CLDND1-217ENST00000508071 PGK1P00558 417 aa21.67■■□□□ 1.06
CLDND1-217ENST00000508071 PGK2P07205 417 aa21.67■■□□□ 1.06
CLDND1-217ENST00000508071 CDK8P49336 464 aa21.67■■□□□ 1.06
CLDND1-217ENST00000508071 KCTD2Q14681 263 aa21.67■■□□□ 1.06
CLDND1-217ENST00000508071 RNPC3Q96LT9 517 aaKnown RBP21.67■■□□□ 1.06
CLDND1-217ENST00000508071 ADAMTS5Q9UNA0 930 aa21.67■■□□□ 1.06
CLDND1-217ENST00000508071 DIS3Q9Y2L1 958 aaKnown RBP21.67■■□□□ 1.06
CLDND1-217ENST00000508071 FOSL2P15408 326 aa21.66■■□□□ 1.06
CLDND1-217ENST00000508071 RIOX2Q8IUF8 465 aa21.66■■□□□ 1.06
CLDND1-217ENST00000508071 DDRGK1Q96HY6 314 aa21.66■■□□□ 1.06
CLDND1-217ENST00000508071 PAG1Q9NWQ8 432 aa21.66■■□□□ 1.06
CLDND1-217ENST00000508071 RAD21O60216 631 aa21.65■■□□□ 1.06
CLDND1-217ENST00000508071 PQBP1O60828 265 aaKnown RBP21.65■■□□□ 1.06
CLDND1-217ENST00000508071 EEF2P13639 858 aaKnown RBP21.65■■□□□ 1.06
CLDND1-217ENST00000508071 RAG1P15918 1043 aa21.65■■□□□ 1.06
CLDND1-217ENST00000508071 COPB2P35606 906 aa21.65■■□□□ 1.06
CLDND1-217ENST00000508071 STAT3P40763 770 aa21.65■■□□□ 1.06
CLDND1-217ENST00000508071 ZNF792Q3KQV3 632 aa21.65■■□□□ 1.06
CLDND1-217ENST00000508071 C12orf60Q5U649 245 aa21.65■■□□□ 1.06
CLDND1-217ENST00000508071 PANK1Q8TE04 598 aa21.65■■□□□ 1.06
CLDND1-217ENST00000508071 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.65■■□□□ 1.06
CLDND1-217ENST00000508071 KANSL2Q9H9L4 492 aa21.65■■□□□ 1.06
CLDND1-217ENST00000508071 GOPCQ9HD26 462 aa21.65■■□□□ 1.06
CLDND1-217ENST00000508071 FBXO28Q9NVF7 368 aa21.65■■□□□ 1.06
CLDND1-217ENST00000508071 ROBO3Q96MS0 1386 aa21.64■■□□□ 1.06
CLDND1-217ENST00000508071 SPTBN5Q9NRC6 3674 aaKnown RBP21.64■■□□□ 1.06
CLDND1-217ENST00000508071 CYP2D7A0A087X1C5 515 aa21.64■■□□□ 1.05
CLDND1-217ENST00000508071 A0A1W2PQ45 241 aaPredicted RBP21.64■■□□□ 1.05
CLDND1-217ENST00000508071 A0A1W2PQY0 241 aa21.64■■□□□ 1.05
CLDND1-217ENST00000508071 USP17L12C9JPN9 530 aa21.64■■□□□ 1.05
CLDND1-217ENST00000508071 USP17L21D6R901 530 aa21.64■■□□□ 1.05
CLDND1-217ENST00000508071 VWA5AO00534 786 aa21.64■■□□□ 1.05
CLDND1-217ENST00000508071 KIAA0355O15063 1070 aa21.64■■□□□ 1.05
CLDND1-217ENST00000508071 AKR1A1P14550 325 aa21.64■■□□□ 1.05
CLDND1-217ENST00000508071 TAL1P17542 331 aaPredicted RBP21.64■■□□□ 1.05
CLDND1-217ENST00000508071 ITGB8P26012 769 aa21.64■■□□□ 1.05
CLDND1-217ENST00000508071 ADD2P35612 726 aa21.64■■□□□ 1.05
CLDND1-217ENST00000508071 C16orf86Q6ZW13 317 aa21.64■■□□□ 1.05
CLDND1-217ENST00000508071 PPP1R9AQ9ULJ8 1098 aa21.64■■□□□ 1.05
CLDND1-217ENST00000508071 CNPY2Q9Y2B0 182 aa21.64■■□□□ 1.05
CLDND1-217ENST00000508071 TTC28Q96AY4 2481 aa21.63■■□□□ 1.05
CLDND1-217ENST00000508071 TMEM265A0A087WTH1 108 aa21.63■■□□□ 1.05
CLDND1-217ENST00000508071 ZNF865P0CJ78 1059 aaPredicted RBP21.63■■□□□ 1.05
CLDND1-217ENST00000508071 SLFNL1Q499Z3 407 aa21.63■■□□□ 1.05
CLDND1-217ENST00000508071 BOLA2Q9H3K6 86 aa21.63■■□□□ 1.05
CLDND1-217ENST00000508071 TMEM39AQ9NV64 488 aa21.63■■□□□ 1.05
CLDND1-217ENST00000508071 MYH7P12883 1935 aa21.63■■□□□ 1.05
CLDND1-217ENST00000508071 SMIM22K7EJ46 135 aa21.62■■□□□ 1.05
CLDND1-217ENST00000508071 HMMRO75330 724 aa21.62■■□□□ 1.05
CLDND1-217ENST00000508071 EPHB4P54760 987 aa21.62■■□□□ 1.05
CLDND1-217ENST00000508071 HNRNPUQ00839 825 aaKnown RBP eCLIP21.62■■□□□ 1.05
CLDND1-217ENST00000508071 FPGSQ05932 587 aa21.62■■□□□ 1.05
CLDND1-217ENST00000508071 FAM83BQ5T0W9 1011 aa21.62■■□□□ 1.05
CLDND1-217ENST00000508071 TSEN34Q9BSV6 310 aaKnown RBP21.62■■□□□ 1.05
CLDND1-217ENST00000508071 RPAP2Q8IXW5 612 aaPredicted RBP21.61■■□□□ 1.05
CLDND1-217ENST00000508071 NUP133Q8WUM0 1156 aa21.61■■□□□ 1.05
CLDND1-217ENST00000508071 LENG1Q96BZ8 264 aaPredicted RBP21.61■■□□□ 1.05
CLDND1-217ENST00000508071 STARD7Q9NQZ5 370 aa21.61■■□□□ 1.05
CLDND1-217ENST00000508071 ZNF214Q9UL59 606 aaPredicted RBP21.61■■□□□ 1.05
CLDND1-217ENST00000508071 SLC4A4Q9Y6R1 1079 aa21.61■■□□□ 1.05
CLDND1-217ENST00000508071 DCDC2CA8MYV0 355 aa21.6■■□□□ 1.05
CLDND1-217ENST00000508071 RAB11FIP3O75154 756 aa21.6■■□□□ 1.05
CLDND1-217ENST00000508071 ADAMTS4O75173 837 aa21.6■■□□□ 1.05
CLDND1-217ENST00000508071 ATP5JP18859 108 aa21.6■■□□□ 1.05
CLDND1-217ENST00000508071 ANKRD33Q7Z3H0 272 aa21.6■■□□□ 1.05
CLDND1-217ENST00000508071 MSL3Q8N5Y2 521 aaKnown RBP21.6■■□□□ 1.05
CLDND1-217ENST00000508071 REPS2Q8NFH8 660 aa21.6■■□□□ 1.05
CLDND1-217ENST00000508071 TOX2Q96NM4 488 aa21.6■■□□□ 1.05
CLDND1-217ENST00000508071 MS4A1P11836 297 aa21.59■■□□□ 1.05
CLDND1-217ENST00000508071 ACLYP53396 1101 aa21.59■■□□□ 1.05
CLDND1-217ENST00000508071 UBE3CQ15386 1083 aa21.59■■□□□ 1.05
CLDND1-217ENST00000508071 CTR9Q6PD62 1173 aa21.59■■□□□ 1.05
CLDND1-217ENST00000508071 SYMPKQ92797 1274 aaKnown RBP21.59■■□□□ 1.05
CLDND1-217ENST00000508071 HAUS7Q99871 368 aa21.59■■□□□ 1.05
CLDND1-217ENST00000508071 SLF1Q9BQI6 1058 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms