RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ZKSCAN1P17029 563 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-209ENST00000506632 NUCB1Q02818 461 aa10.82□□□□□ -0.68
PDLIM5-209ENST00000506632 PPARAQ07869 468 aa10.82□□□□□ -0.68
PDLIM5-209ENST00000506632 CHD1LQ86WJ1 897 aa10.82□□□□□ -0.68
PDLIM5-209ENST00000506632 PLEKHM2Q8IWE5 1019 aa10.82□□□□□ -0.68
PDLIM5-209ENST00000506632 STK11IPQ8N1F8 1099 aa10.82□□□□□ -0.68
PDLIM5-209ENST00000506632 MKL1Q969V6 931 aa10.82□□□□□ -0.68
PDLIM5-209ENST00000506632 NAPBQ9H115 298 aa10.82□□□□□ -0.68
PDLIM5-209ENST00000506632 ZNF287Q9HBT7 754 aa10.82□□□□□ -0.68
PDLIM5-209ENST00000506632 GOPCQ9HD26 462 aa10.82□□□□□ -0.68
PDLIM5-209ENST00000506632 HMX1Q9NP08 348 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-209ENST00000506632 HELLSQ9NRZ9 838 aa10.82□□□□□ -0.68
PDLIM5-209ENST00000506632 FBXO28Q9NVF7 368 aa10.82□□□□□ -0.68
PDLIM5-209ENST00000506632 SYNPO2Q9UMS6 1093 aa10.82□□□□□ -0.68
PDLIM5-209ENST00000506632 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.82□□□□□ -0.68
PDLIM5-209ENST00000506632 A0A0D9SFI3 127 aa10.81□□□□□ -0.68
PDLIM5-209ENST00000506632 ERCC3P19447 782 aa10.81□□□□□ -0.68
PDLIM5-209ENST00000506632 MNX1P50219 401 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-209ENST00000506632 ATP2B2Q01814 1243 aa10.81□□□□□ -0.68
PDLIM5-209ENST00000506632 CACNB2Q08289 660 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-209ENST00000506632 ALX1Q15699 326 aa10.81□□□□□ -0.68
PDLIM5-209ENST00000506632 VPS53Q5VIR6 699 aa10.81□□□□□ -0.68
PDLIM5-209ENST00000506632 ZNF444Q8N0Y2 327 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-209ENST00000506632 ANKLE1Q8NAG6 615 aa10.81□□□□□ -0.68
PDLIM5-209ENST00000506632 REPS2Q8NFH8 660 aa10.81□□□□□ -0.68
PDLIM5-209ENST00000506632 NEDD1Q8NHV4 660 aa10.81□□□□□ -0.68
PDLIM5-209ENST00000506632 NPLOC4Q8TAT6 608 aa10.81□□□□□ -0.68
PDLIM5-209ENST00000506632 CEP95Q96GE4 821 aa10.81□□□□□ -0.68
PDLIM5-209ENST00000506632 FAM227BQ96M60 508 aa10.81□□□□□ -0.68
PDLIM5-209ENST00000506632 MTMR4Q9NYA4 1195 aa10.81□□□□□ -0.68
PDLIM5-209ENST00000506632 FLRT1Q9NZU1 646 aa10.81□□□□□ -0.68
PDLIM5-209ENST00000506632 ANAPC4Q9UJX5 808 aa10.81□□□□□ -0.68
PDLIM5-209ENST00000506632 PPP1R9AQ9ULJ8 1098 aa10.81□□□□□ -0.68
PDLIM5-209ENST00000506632 SUPT16HQ9Y5B9 1047 aaKnown RBP10.81□□□□□ -0.68
PDLIM5-209ENST00000506632 IVNS1ABPQ9Y6Y0 642 aa10.81□□□□□ -0.68
PDLIM5-209ENST00000506632 MYH4Q9Y623 1939 aa10.81□□□□□ -0.68
PDLIM5-209ENST00000506632 COL11A1P12107 1806 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-209ENST00000506632 F5H6K3 240 aa10.8□□□□□ -0.68
PDLIM5-209ENST00000506632 STRNO43815 780 aa10.8□□□□□ -0.68
PDLIM5-209ENST00000506632 NDUFB10O96000 172 aa10.8□□□□□ -0.68
PDLIM5-209ENST00000506632 TFRCP02786 760 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-209ENST00000506632 FGRP09769 529 aa10.8□□□□□ -0.68
PDLIM5-209ENST00000506632 PDE4BQ07343 736 aa10.8□□□□□ -0.68
PDLIM5-209ENST00000506632 KLRC3Q07444 240 aa10.8□□□□□ -0.68
PDLIM5-209ENST00000506632 TMEM132BQ14DG7 1078 aa10.8□□□□□ -0.68
PDLIM5-209ENST00000506632 FAM83BQ5T0W9 1011 aa10.8□□□□□ -0.68
PDLIM5-209ENST00000506632 WDR78Q5VTH9 848 aa10.8□□□□□ -0.68
PDLIM5-209ENST00000506632 B4GALNT3Q6L9W6 998 aa10.8□□□□□ -0.68
PDLIM5-209ENST00000506632 ABRAQ8N0Z2 381 aa10.8□□□□□ -0.68
PDLIM5-209ENST00000506632 MROH8Q9H579 483 aa10.8□□□□□ -0.68
PDLIM5-209ENST00000506632 CWC22Q9HCG8 908 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-209ENST00000506632 CLIP2Q9UDT6 1046 aa10.8□□□□□ -0.68
PDLIM5-209ENST00000506632 ZNF214Q9UL59 606 aaPredicted RBP10.8□□□□□ -0.68
PDLIM5-209ENST00000506632 OGDHLQ9ULD0 1010 aa10.8□□□□□ -0.68
PDLIM5-209ENST00000506632 TACC3Q9Y6A5 838 aa10.8□□□□□ -0.68
PDLIM5-209ENST00000506632 ZMYM6O95789 1325 aa10.8□□□□□ -0.68
PDLIM5-209ENST00000506632 VWA5AO00534 786 aa10.79□□□□□ -0.68
PDLIM5-209ENST00000506632 SLC34A2O95436 690 aa10.79□□□□□ -0.68
PDLIM5-209ENST00000506632 SLC25A27O95847 323 aa10.79□□□□□ -0.68
PDLIM5-209ENST00000506632 TTLL1O95922 423 aa10.79□□□□□ -0.68
PDLIM5-209ENST00000506632 SLC3A2P08195 630 aaKnown RBP10.79□□□□□ -0.68
PDLIM5-209ENST00000506632 ADORA2AP29274 412 aa10.79□□□□□ -0.68
PDLIM5-209ENST00000506632 CCND3P30281 292 aaPredicted RBP10.79□□□□□ -0.68
PDLIM5-209ENST00000506632 NMIQ13287 307 aaPredicted RBP10.79□□□□□ -0.68
PDLIM5-209ENST00000506632 MCMDC2Q4G0Z9 681 aa10.79□□□□□ -0.68
PDLIM5-209ENST00000506632 FAM47AQ5JRC9 791 aa10.79□□□□□ -0.68
PDLIM5-209ENST00000506632 LHX8Q68G74 356 aa10.79□□□□□ -0.68
PDLIM5-209ENST00000506632 ZNF589Q86UQ0 364 aaPredicted RBP10.79□□□□□ -0.68
PDLIM5-209ENST00000506632 GMCL1P1Q8NEA9 526 aa10.79□□□□□ -0.68
PDLIM5-209ENST00000506632 DIS3LQ8TF46 1054 aaKnown RBP10.79□□□□□ -0.68
PDLIM5-209ENST00000506632 NUP88Q99567 741 aaPredicted RBP10.79□□□□□ -0.68
PDLIM5-209ENST00000506632 HTATIP2Q9BUP3 242 aa10.79□□□□□ -0.68
PDLIM5-209ENST00000506632 ALPK3Q96L96 1907 aa10.78□□□□□ -0.68
PDLIM5-209ENST00000506632 H0YGN5 161 aa10.78□□□□□ -0.68
PDLIM5-209ENST00000506632 ORC4O43929 436 aa10.78□□□□□ -0.68
PDLIM5-209ENST00000506632 COBLO75128 1261 aa10.78□□□□□ -0.68
PDLIM5-209ENST00000506632 FGAP02671 866 aa10.78□□□□□ -0.68
PDLIM5-209ENST00000506632 TSPY3P0CV98 308 aa10.78□□□□□ -0.68
PDLIM5-209ENST00000506632 TSPY8P0CW00 308 aa10.78□□□□□ -0.68
PDLIM5-209ENST00000506632 HSPD1P10809 573 aaKnown RBP10.78□□□□□ -0.68
PDLIM5-209ENST00000506632 NOVP48745 357 aa10.78□□□□□ -0.68
PDLIM5-209ENST00000506632 TFAP4Q01664 338 aa10.78□□□□□ -0.68
PDLIM5-209ENST00000506632 CTDSPL2Q05D32 466 aa10.78□□□□□ -0.68
PDLIM5-209ENST00000506632 PLS1Q14651 629 aa10.78□□□□□ -0.68
PDLIM5-209ENST00000506632 MFSD14CQ5VZR4 134 aa10.78□□□□□ -0.68
PDLIM5-209ENST00000506632 OLFML2BQ68BL8 750 aa10.78□□□□□ -0.68
PDLIM5-209ENST00000506632 RIOX2Q8IUF8 465 aa10.78□□□□□ -0.68
PDLIM5-209ENST00000506632 PAWRQ96IZ0 340 aaKnown RBP10.78□□□□□ -0.68
PDLIM5-209ENST00000506632 SLF1Q9BQI6 1058 aa10.78□□□□□ -0.68
PDLIM5-209ENST00000506632 FRMPD3Q5JV73 1810 aa10.78□□□□□ -0.68
PDLIM5-209ENST00000506632 CCDC171Q6TFL3 1326 aa10.78□□□□□ -0.68
PDLIM5-209ENST00000506632 TRIM6-TRIM34B2RNG4 842 aa10.77□□□□□ -0.69
PDLIM5-209ENST00000506632 ATP2A1O14983 1001 aa10.77□□□□□ -0.69
PDLIM5-209ENST00000506632 CYBAP13498 195 aa10.77□□□□□ -0.69
PDLIM5-209ENST00000506632 SDSP20132 328 aa10.77□□□□□ -0.69
PDLIM5-209ENST00000506632 CYP2C19P33261 490 aa10.77□□□□□ -0.69
PDLIM5-209ENST00000506632 COPB2P35606 906 aa10.77□□□□□ -0.69
PDLIM5-209ENST00000506632 STAT3P40763 770 aa10.77□□□□□ -0.69
PDLIM5-209ENST00000506632 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.77□□□□□ -0.69
PDLIM5-209ENST00000506632 NECAB2Q7Z6G3 386 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms