RNA–Protein interactions for RNA: ENST00000506563.5

CDK7-204, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-204ENST00000506563 BMP3P12645 472 aa14.87□□□□□ -0.03
CDK7-204ENST00000506563 HSPA6P17066 643 aa14.87□□□□□ -0.03
CDK7-204ENST00000506563 SH3D19Q5HYK7 790 aa14.87□□□□□ -0.03
CDK7-204ENST00000506563 FBXL16Q8N461 479 aa14.87□□□□□ -0.03
CDK7-204ENST00000506563 DCAF4Q8WV16 495 aa14.87□□□□□ -0.03
CDK7-204ENST00000506563 ZIC5Q96T25 663 aa14.87□□□□□ -0.03
CDK7-204ENST00000506563 SLKQ9H2G2 1235 aaPredicted RBP14.87□□□□□ -0.03
CDK7-204ENST00000506563 NCOA5Q9HCD5 579 aaKnown RBP14.87□□□□□ -0.03
CDK7-204ENST00000506563 TSHZ2Q9NRE2 1034 aa14.87□□□□□ -0.03
CDK7-204ENST00000506563 LIMCH1Q9UPQ0 1083 aa14.87□□□□□ -0.03
CDK7-204ENST00000506563 LOC285556D6RIA3 1793 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 TMEM232C9JQI7 657 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 WDR46O15213 610 aaKnown RBP14.86□□□□□ -0.03
CDK7-204ENST00000506563 DHX16O60231 1041 aaKnown RBP14.86□□□□□ -0.03
CDK7-204ENST00000506563 DTNBO60941 627 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 PPFIA3O75145 1194 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 CALM1P0DP23 149 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 CALM2P0DP24 149 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 CALM3P0DP25 149 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 PDIA3P30101 505 aaKnown RBP14.86□□□□□ -0.03
CDK7-204ENST00000506563 KIF23Q02241 960 aaPredicted RBP14.86□□□□□ -0.03
CDK7-204ENST00000506563 TROAPQ12815 778 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 GRM4Q14833 912 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 ME3Q16798 604 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 RTN1Q16799 776 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 TTBK2Q6IQ55 1244 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 PPP4R3CPQ6ZMV5 832 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 FASTKD5Q7L8L6 764 aaKnown RBP14.86□□□□□ -0.03
CDK7-204ENST00000506563 HSCBQ8IWL3 235 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 CMTR1Q8N1G2 835 aaKnown RBP14.86□□□□□ -0.03
CDK7-204ENST00000506563 STAG2Q8N3U4 1231 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 CCDC82Q8N4S0 544 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 NECAB1Q8N987 351 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 BRI3BPQ8WY22 251 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 LPAR1Q92633 364 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 GMCL1Q96IK5 515 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 MS4A4AQ96JQ5 239 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 CPVLQ9H3G5 476 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 SYNPO2Q9UMS6 1093 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 HPS5Q9UPZ3 1129 aa14.86□□□□□ -0.03
CDK7-204ENST00000506563 MANSC4A6NHS7 340 aaPredicted RBP14.85□□□□□ -0.03
CDK7-204ENST00000506563 PLEKHA8P1O95397 391 aa14.85□□□□□ -0.03
CDK7-204ENST00000506563 KIF5BP33176 963 aa14.85□□□□□ -0.03
CDK7-204ENST00000506563 SLC16A2P36021 539 aa14.85□□□□□ -0.03
CDK7-204ENST00000506563 VEGFBP49765 207 aa14.85□□□□□ -0.03
CDK7-204ENST00000506563 ZNF543Q08ER8 600 aa14.85□□□□□ -0.03
CDK7-204ENST00000506563 FANCBQ8NB91 859 aa14.85□□□□□ -0.03
CDK7-204ENST00000506563 PROCA1Q8NCQ7 364 aaPredicted RBP14.85□□□□□ -0.03
CDK7-204ENST00000506563 PIBF1Q8WXW3 757 aa14.85□□□□□ -0.03
CDK7-204ENST00000506563 KIFC2Q96AC6 838 aa14.85□□□□□ -0.03
CDK7-204ENST00000506563 ZNF274Q96GC6 653 aaPredicted RBP14.85□□□□□ -0.03
CDK7-204ENST00000506563 C12orf42Q96LP6 360 aa14.85□□□□□ -0.03
CDK7-204ENST00000506563 UBA5Q9GZZ9 404 aa14.85□□□□□ -0.03
CDK7-204ENST00000506563 MAD2L2Q9UI95 211 aa14.85□□□□□ -0.03
CDK7-204ENST00000506563 AGTPBP1Q9UPW5 1226 aa14.85□□□□□ -0.03
CDK7-204ENST00000506563 WDR33Q9C0J8 1336 aaKnown RBP14.85□□□□□ -0.03
CDK7-204ENST00000506563 BTBD19C9JJ37 291 aa14.84□□□□□ -0.03
CDK7-204ENST00000506563 KLRF2D3W0D1 207 aa14.84□□□□□ -0.03
CDK7-204ENST00000506563 FLOT1O75955 427 aa14.84□□□□□ -0.03
CDK7-204ENST00000506563 CDC27P30260 824 aa14.84□□□□□ -0.03
CDK7-204ENST00000506563 IRX3P78415 501 aaPredicted RBP14.84□□□□□ -0.03
CDK7-204ENST00000506563 SCRN1Q12765 414 aa14.84□□□□□ -0.03
CDK7-204ENST00000506563 NOGQ13253 232 aa14.84□□□□□ -0.03
CDK7-204ENST00000506563 MOGSQ13724 837 aa14.84□□□□□ -0.03
CDK7-204ENST00000506563 ASPRV1Q53RT3 343 aa14.84□□□□□ -0.03
CDK7-204ENST00000506563 CCDC83Q8IWF9 413 aa14.84□□□□□ -0.03
CDK7-204ENST00000506563 FAM43AQ8N2R8 423 aa14.84□□□□□ -0.03
CDK7-204ENST00000506563 ZSCAN31Q96LW9 406 aaPredicted RBP14.84□□□□□ -0.03
CDK7-204ENST00000506563 VAT1LQ9HCJ6 419 aa14.84□□□□□ -0.03
CDK7-204ENST00000506563 FBXO28Q9NVF7 368 aa14.84□□□□□ -0.03
CDK7-204ENST00000506563 USP17L15C9J2P7 530 aa14.83□□□□□ -0.04
CDK7-204ENST00000506563 USP17L13C9JLJ4 530 aa14.83□□□□□ -0.04
CDK7-204ENST00000506563 USP17L11C9JVI0 530 aa14.83□□□□□ -0.04
CDK7-204ENST00000506563 USP17L18D6R9N7 530 aa14.83□□□□□ -0.04
CDK7-204ENST00000506563 USP17L22D6RA61 530 aa14.83□□□□□ -0.04
CDK7-204ENST00000506563 USP17L17D6RBQ6 530 aa14.83□□□□□ -0.04
CDK7-204ENST00000506563 USP17L19D6RCP7 530 aa14.83□□□□□ -0.04
CDK7-204ENST00000506563 USP17L20D6RJB6 530 aa14.83□□□□□ -0.04
CDK7-204ENST00000506563 PDHXO00330 501 aa14.83□□□□□ -0.04
CDK7-204ENST00000506563 CPLX1O14810 134 aa14.83□□□□□ -0.04
CDK7-204ENST00000506563 PFKFB2O60825 505 aa14.83□□□□□ -0.04
CDK7-204ENST00000506563 SNHG28P0DPA3 235 aa14.83□□□□□ -0.04
CDK7-204ENST00000506563 ADD1P35611 737 aaKnown RBP14.83□□□□□ -0.04
CDK7-204ENST00000506563 MCM2P49736 904 aa14.83□□□□□ -0.04
CDK7-204ENST00000506563 STAT2P52630 851 aa14.83□□□□□ -0.04
CDK7-204ENST00000506563 EVCP57679 992 aa14.83□□□□□ -0.04
CDK7-204ENST00000506563 SNAP25P60880 206 aa14.83□□□□□ -0.04
CDK7-204ENST00000506563 USP17L24Q0WX57 530 aa14.83□□□□□ -0.04
CDK7-204ENST00000506563 SREBF2Q12772 1141 aa14.83□□□□□ -0.04
CDK7-204ENST00000506563 GPATCH4Q5T3I0 446 aaKnown RBP14.83□□□□□ -0.04
CDK7-204ENST00000506563 GPAT2Q6NUI2 795 aa14.83□□□□□ -0.04
CDK7-204ENST00000506563 PTPN18Q99952 460 aa14.83□□□□□ -0.04
CDK7-204ENST00000506563 RBM28Q9NW13 759 aaKnown RBP14.83□□□□□ -0.04
CDK7-204ENST00000506563 PALM3A6NDB9 673 aaPredicted RBP14.82□□□□□ -0.04
CDK7-204ENST00000506563 K7ELQ4 463 aaPredicted RBP14.82□□□□□ -0.04
CDK7-204ENST00000506563 IGF2BP3O00425 579 aaKnown RBP eCLIP14.82□□□□□ -0.04
CDK7-204ENST00000506563 OSBPP22059 807 aa14.82□□□□□ -0.04
CDK7-204ENST00000506563 PABPC4Q13310 644 aaKnown RBP eCLIP14.82□□□□□ -0.04
CDK7-204ENST00000506563 CATSPERGQ6ZRH7 1159 aa14.82□□□□□ -0.04
CDK7-204ENST00000506563 TMTC3Q6ZXV5 915 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms