RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 STAP2Q9UGK3 403 aa26.57■■□□□ 1.84
SUDS3P1-201ENST00000505831 PATL2C9JE40 543 aaKnown RBP26.56■■□□□ 1.84
SUDS3P1-201ENST00000505831 C7orf61Q8IZ16 206 aa26.56■■□□□ 1.84
SUDS3P1-201ENST00000505831 GDF15Q99988 308 aa26.56■■□□□ 1.84
SUDS3P1-201ENST00000505831 FBXO28Q9NVF7 368 aa26.56■■□□□ 1.84
SUDS3P1-201ENST00000505831 MINDY4BA8MYZ0 360 aa26.55■■□□□ 1.84
SUDS3P1-201ENST00000505831 CYBAP13498 195 aa26.55■■□□□ 1.84
SUDS3P1-201ENST00000505831 RRP1P56182 461 aaKnown RBP26.55■■□□□ 1.84
SUDS3P1-201ENST00000505831 GOPCQ9HD26 462 aa26.55■■□□□ 1.84
SUDS3P1-201ENST00000505831 NYAP2Q9P242 653 aa26.55■■□□□ 1.84
SUDS3P1-201ENST00000505831 DDX20Q9UHI6 824 aaKnown RBP26.55■■□□□ 1.84
SUDS3P1-201ENST00000505831 SALL3Q9BXA9 1300 aa26.55■■□□□ 1.84
SUDS3P1-201ENST00000505831 IGKV6D-41A0A0C4DH26 115 aa26.54■■□□□ 1.84
SUDS3P1-201ENST00000505831 ERC2O15083 957 aa26.54■■□□□ 1.84
SUDS3P1-201ENST00000505831 MSCO60682 206 aa26.54■■□□□ 1.84
SUDS3P1-201ENST00000505831 BMP8BP34820 402 aa26.54■■□□□ 1.84
SUDS3P1-201ENST00000505831 PLS1Q14651 629 aa26.54■■□□□ 1.84
SUDS3P1-201ENST00000505831 IFNL3Q8IZI9 196 aa26.54■■□□□ 1.84
SUDS3P1-201ENST00000505831 REPS2Q8NFH8 660 aa26.54■■□□□ 1.84
SUDS3P1-201ENST00000505831 MKNK2Q9HBH9 465 aa26.54■■□□□ 1.84
SUDS3P1-201ENST00000505831 VWA5AO00534 786 aa26.53■■□□□ 1.84
SUDS3P1-201ENST00000505831 SLC25A27O95847 323 aa26.53■■□□□ 1.84
SUDS3P1-201ENST00000505831 LRRFIP1Q32MZ4 808 aaKnown RBP26.53■■□□□ 1.84
SUDS3P1-201ENST00000505831 NCAPG2Q86XI2 1143 aa26.53■■□□□ 1.84
SUDS3P1-201ENST00000505831 SEC62Q99442 399 aaKnown RBP26.53■■□□□ 1.84
SUDS3P1-201ENST00000505831 ZNF214Q9UL59 606 aaPredicted RBP26.53■■□□□ 1.84
SUDS3P1-201ENST00000505831 PPP1R9AQ9ULJ8 1098 aa26.53■■□□□ 1.84
SUDS3P1-201ENST00000505831 MCM3APO60318 1980 aa26.53■■□□□ 1.84
SUDS3P1-201ENST00000505831 FAM83BQ5T0W9 1011 aa26.52■■□□□ 1.84
SUDS3P1-201ENST00000505831 RIOX2Q8IUF8 465 aa26.52■■□□□ 1.84
SUDS3P1-201ENST00000505831 STK11IPQ8N1F8 1099 aa26.52■■□□□ 1.84
SUDS3P1-201ENST00000505831 MKL1Q969V6 931 aa26.52■■□□□ 1.84
SUDS3P1-201ENST00000505831 F5H6K3 240 aa26.51■■□□□ 1.83
SUDS3P1-201ENST00000505831 FCER1AP12319 257 aa26.51■■□□□ 1.83
SUDS3P1-201ENST00000505831 MX1P20591 662 aa26.51■■□□□ 1.83
SUDS3P1-201ENST00000505831 KLRC3Q07444 240 aa26.51■■□□□ 1.83
SUDS3P1-201ENST00000505831 ZMYM1Q5SVZ6 1142 aa26.51■■□□□ 1.83
SUDS3P1-201ENST00000505831 ZMYND8Q9ULU4 1186 aaPredicted RBP26.51■■□□□ 1.83
SUDS3P1-201ENST00000505831 CNGA1P29973 690 aa26.5■■□□□ 1.83
SUDS3P1-201ENST00000505831 TDO2P48775 406 aa26.5■■□□□ 1.83
SUDS3P1-201ENST00000505831 LRRC26Q2I0M4 334 aa26.5■■□□□ 1.83
SUDS3P1-201ENST00000505831 MAML3Q96JK9 1138 aa26.5■■□□□ 1.83
SUDS3P1-201ENST00000505831 SLC5A4Q9NY91 659 aa26.5■■□□□ 1.83
SUDS3P1-201ENST00000505831 APPP05067 770 aa26.49■■□□□ 1.83
SUDS3P1-201ENST00000505831 STAT3P40763 770 aa26.49■■□□□ 1.83
SUDS3P1-201ENST00000505831 CRBNQ96SW2 442 aa26.49■■□□□ 1.83
SUDS3P1-201ENST00000505831 NDUFB10O96000 172 aa26.48■■□□□ 1.83
SUDS3P1-201ENST00000505831 SAMD1Q6SPF0 538 aaPredicted RBP26.48■■□□□ 1.83
SUDS3P1-201ENST00000505831 ZNF444Q8N0Y2 327 aaPredicted RBP26.48■■□□□ 1.83
SUDS3P1-201ENST00000505831 NUP88Q99567 741 aaPredicted RBP26.48■■□□□ 1.83
SUDS3P1-201ENST00000505831 FSD1Q9BTV5 496 aa26.48■■□□□ 1.83
SUDS3P1-201ENST00000505831 ZNF287Q9HBT7 754 aa26.48■■□□□ 1.83
SUDS3P1-201ENST00000505831 CLIP2Q9UDT6 1046 aa26.48■■□□□ 1.83
SUDS3P1-201ENST00000505831 DNM1LO00429 736 aa26.47■■□□□ 1.83
SUDS3P1-201ENST00000505831 SEPT4O43236 478 aa26.47■■□□□ 1.83
SUDS3P1-201ENST00000505831 PRDM1O75626 825 aa26.47■■□□□ 1.83
SUDS3P1-201ENST00000505831 SYN1P17600 705 aa26.47■■□□□ 1.83
SUDS3P1-201ENST00000505831 MTMR4Q9NYA4 1195 aa26.47■■□□□ 1.83
SUDS3P1-201ENST00000505831 SYNPO2Q9UMS6 1093 aa26.47■■□□□ 1.83
SUDS3P1-201ENST00000505831 DIS3Q9Y2L1 958 aaKnown RBP26.47■■□□□ 1.83
SUDS3P1-201ENST00000505831 FOXP2O15409 715 aa26.46■■□□□ 1.83
SUDS3P1-201ENST00000505831 HDAC1Q13547 482 aaPredicted RBP26.46■■□□□ 1.83
SUDS3P1-201ENST00000505831 ZNF792Q3KQV3 632 aa26.46■■□□□ 1.83
SUDS3P1-201ENST00000505831 PRAMEF19Q5SWL8 479 aa26.46■■□□□ 1.83
SUDS3P1-201ENST00000505831 PRPF38AQ8NAV1 312 aaKnown RBP26.46■■□□□ 1.83
SUDS3P1-201ENST00000505831 NEDD1Q8NHV4 660 aa26.46■■□□□ 1.83
SUDS3P1-201ENST00000505831 CEP95Q96GE4 821 aa26.46■■□□□ 1.83
SUDS3P1-201ENST00000505831 SLF1Q9BQI6 1058 aa26.46■■□□□ 1.83
SUDS3P1-201ENST00000505831 NACAP1Q9BZK3 213 aa26.46■■□□□ 1.83
SUDS3P1-201ENST00000505831 SENP6Q9GZR1 1112 aaPredicted RBP26.46■■□□□ 1.83
SUDS3P1-201ENST00000505831 PLIN4Q96Q06 1357 aa26.46■■□□□ 1.83
SUDS3P1-201ENST00000505831 RAD21O60216 631 aa26.45■■□□□ 1.82
SUDS3P1-201ENST00000505831 MAGEA10P43363 369 aaPredicted RBP26.45■■□□□ 1.82
SUDS3P1-201ENST00000505831 ANKRD45Q5TZF3 282 aa26.45■■□□□ 1.82
SUDS3P1-201ENST00000505831 MMP19Q99542 508 aa26.45■■□□□ 1.82
SUDS3P1-201ENST00000505831 LTBP2Q14767 1821 aa26.44■■□□□ 1.82
SUDS3P1-201ENST00000505831 LAMA2P24043 3122 aaKnown RBP26.44■■□□□ 1.82
SUDS3P1-201ENST00000505831 SOX1O00570 391 aaPredicted RBP26.44■■□□□ 1.82
SUDS3P1-201ENST00000505831 ATP2A1O14983 1001 aa26.44■■□□□ 1.82
SUDS3P1-201ENST00000505831 COPB2P35606 906 aa26.44■■□□□ 1.82
SUDS3P1-201ENST00000505831 ARRDC4Q8NCT1 418 aa26.44■■□□□ 1.82
SUDS3P1-201ENST00000505831 NRBP1Q9UHY1 535 aa26.44■■□□□ 1.82
SUDS3P1-201ENST00000505831 PGK2P07205 417 aa26.43■■□□□ 1.82
SUDS3P1-201ENST00000505831 KCTD2Q14681 263 aa26.43■■□□□ 1.82
SUDS3P1-201ENST00000505831 GMCL1P1Q8NEA9 526 aa26.43■■□□□ 1.82
SUDS3P1-201ENST00000505831 RIPK3Q9Y572 518 aa26.43■■□□□ 1.82
SUDS3P1-201ENST00000505831 TTLL1O95922 423 aa26.42■■□□□ 1.82
SUDS3P1-201ENST00000505831 PDE4BQ07343 736 aa26.42■■□□□ 1.82
SUDS3P1-201ENST00000505831 PPARAQ07869 468 aa26.42■■□□□ 1.82
SUDS3P1-201ENST00000505831 GJC2Q5T442 439 aaPredicted RBP26.42■■□□□ 1.82
SUDS3P1-201ENST00000505831 TINF2Q9BSI4 451 aa26.42■■□□□ 1.82
SUDS3P1-201ENST00000505831 TEX13BQ9BXU2 312 aa26.42■■□□□ 1.82
SUDS3P1-201ENST00000505831 NAPBQ9H115 298 aa26.42■■□□□ 1.82
SUDS3P1-201ENST00000505831 COL6A3P12111 3177 aa26.41■■□□□ 1.82
SUDS3P1-201ENST00000505831 PDE1AP54750 535 aa26.41■■□□□ 1.82
SUDS3P1-201ENST00000505831 ANO1Q5XXA6 986 aa26.41■■□□□ 1.82
SUDS3P1-201ENST00000505831 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.41■■□□□ 1.82
SUDS3P1-201ENST00000505831 DNAJC25-GNG10A0A024R161 153 aa26.4■■□□□ 1.82
SUDS3P1-201ENST00000505831 TFAP4Q01664 338 aa26.4■■□□□ 1.82
SUDS3P1-201ENST00000505831 FAM47AQ5JRC9 791 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms