RNA–Protein interactions for RNA: ENST00000505564.2

AC012339.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012339.1, Length 941 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012339.1-201ENST00000505564 DDX12PQ92771 950 aa12.48□□□□□ -0.41
AC012339.1-201ENST00000505564 DSCC1Q9BVC3 393 aa12.48□□□□□ -0.41
AC012339.1-201ENST00000505564 KIAA1683Q9H0B3 1180 aa12.48□□□□□ -0.41
AC012339.1-201ENST00000505564 RNF41Q9H4P4 317 aaPredicted RBP12.48□□□□□ -0.41
AC012339.1-201ENST00000505564 CASP8AP2Q9UKL3 1982 aa12.48□□□□□ -0.41
AC012339.1-201ENST00000505564 DDX60LQ5H9U9 1706 aaKnown RBP12.48□□□□□ -0.41
AC012339.1-201ENST00000505564 RAD21O60216 631 aa12.47□□□□□ -0.41
AC012339.1-201ENST00000505564 TLR2O60603 784 aa12.47□□□□□ -0.41
AC012339.1-201ENST00000505564 PCP11498 1178 aaKnown RBP12.47□□□□□ -0.41
AC012339.1-201ENST00000505564 RASA1P20936 1047 aa12.47□□□□□ -0.41
AC012339.1-201ENST00000505564 JAG1P78504 1218 aa12.47□□□□□ -0.41
AC012339.1-201ENST00000505564 SP3Q02447 781 aa12.47□□□□□ -0.41
AC012339.1-201ENST00000505564 CTDSPL2Q05D32 466 aa12.47□□□□□ -0.41
AC012339.1-201ENST00000505564 SHROOM1Q2M3G4 852 aaPredicted RBP12.47□□□□□ -0.41
AC012339.1-201ENST00000505564 MFSD6Q6ZSS7 791 aa12.47□□□□□ -0.41
AC012339.1-201ENST00000505564 ERO1AQ96HE7 468 aa12.47□□□□□ -0.41
AC012339.1-201ENST00000505564 GOPCQ9HD26 462 aa12.47□□□□□ -0.41
AC012339.1-201ENST00000505564 ANAPC4Q9UJX5 808 aa12.47□□□□□ -0.41
AC012339.1-201ENST00000505564 SIPA1L1O43166 1804 aa12.46□□□□□ -0.41
AC012339.1-201ENST00000505564 RANBP6O60518 1105 aaKnown RBP12.46□□□□□ -0.41
AC012339.1-201ENST00000505564 PRDM1O75626 825 aa12.46□□□□□ -0.41
AC012339.1-201ENST00000505564 NT5C2P49902 561 aa12.46□□□□□ -0.41
AC012339.1-201ENST00000505564 TFAP4Q01664 338 aa12.46□□□□□ -0.41
AC012339.1-201ENST00000505564 RRP12Q5JTH9 1297 aaKnown RBP12.46□□□□□ -0.41
AC012339.1-201ENST00000505564 GPAT2Q6NUI2 795 aa12.46□□□□□ -0.41
AC012339.1-201ENST00000505564 ZNF296Q8WUU4 475 aaPredicted RBP12.46□□□□□ -0.41
AC012339.1-201ENST00000505564 SLC4A5Q9BY07 1137 aa12.46□□□□□ -0.41
AC012339.1-201ENST00000505564 BAZ2AQ9UIF9 1905 aaKnown RBP12.46□□□□□ -0.42
AC012339.1-201ENST00000505564 USP17L15C9J2P7 530 aa12.45□□□□□ -0.42
AC012339.1-201ENST00000505564 USP17L13C9JLJ4 530 aa12.45□□□□□ -0.42
AC012339.1-201ENST00000505564 USP17L11C9JVI0 530 aa12.45□□□□□ -0.42
AC012339.1-201ENST00000505564 USP17L18D6R9N7 530 aa12.45□□□□□ -0.42
AC012339.1-201ENST00000505564 USP17L22D6RA61 530 aa12.45□□□□□ -0.42
AC012339.1-201ENST00000505564 USP17L17D6RBQ6 530 aa12.45□□□□□ -0.42
AC012339.1-201ENST00000505564 USP17L19D6RCP7 530 aa12.45□□□□□ -0.42
AC012339.1-201ENST00000505564 USP17L20D6RJB6 530 aa12.45□□□□□ -0.42
AC012339.1-201ENST00000505564 CDC45O75419 566 aa12.45□□□□□ -0.42
AC012339.1-201ENST00000505564 EEF2P13639 858 aaKnown RBP12.45□□□□□ -0.42
AC012339.1-201ENST00000505564 HAND2P61296 217 aa12.45□□□□□ -0.42
AC012339.1-201ENST00000505564 USP17L24Q0WX57 530 aa12.45□□□□□ -0.42
AC012339.1-201ENST00000505564 MOGSQ13724 837 aa12.45□□□□□ -0.42
AC012339.1-201ENST00000505564 TREML2Q5T2D2 321 aa12.45□□□□□ -0.42
AC012339.1-201ENST00000505564 ACER1Q8TDN7 264 aa12.45□□□□□ -0.42
AC012339.1-201ENST00000505564 GTF3C2Q8WUA4 911 aaPredicted RBP12.45□□□□□ -0.42
AC012339.1-201ENST00000505564 LPAR1Q92633 364 aa12.45□□□□□ -0.42
AC012339.1-201ENST00000505564 ESR2Q92731 530 aa12.45□□□□□ -0.42
AC012339.1-201ENST00000505564 TMX2Q9Y320 296 aa12.45□□□□□ -0.42
AC012339.1-201ENST00000505564 ATAD5Q96QE3 1844 aa12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 SMIM22K7EJ46 135 aa12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 FOXP2O15409 715 aa12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 SGSM2O43147 1006 aa12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 ORC4O43929 436 aa12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 TTLL1O95922 423 aa12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 CYP2C8P10632 490 aa12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 HOXA7P31268 230 aaPredicted RBP12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 GUCY1A2P33402 732 aa12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 GCLCP48506 637 aaPredicted RBP12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 TRDNQ13061 729 aa12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 PKN2Q16513 984 aaKnown RBP12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 FAM47AQ5JRC9 791 aa12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 AKNAD1Q5T1N1 836 aa12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 CTU1Q7Z7A3 348 aaKnown RBP12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 SKAP1Q86WV1 359 aa12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 CCAR1Q8IX12 1150 aaKnown RBP12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 NEDD1Q8NHV4 660 aa12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 C12orf42Q96LP6 360 aa12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 TANGO6Q9C0B7 1094 aa12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 ASCC2Q9H1I8 757 aaPredicted RBP12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 CNNM2Q9H8M5 875 aa12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 NYAP2Q9P242 653 aa12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 CLIP2Q9UDT6 1046 aa12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 CPA4Q9UI42 421 aa12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 VPS9D1Q9Y2B5 631 aa12.44□□□□□ -0.42
AC012339.1-201ENST00000505564 LAMB1P07942 1786 aa12.43□□□□□ -0.42
AC012339.1-201ENST00000505564 PPP1R3GB7ZBB8 358 aa12.43□□□□□ -0.42
AC012339.1-201ENST00000505564 HRO43593 1189 aa12.43□□□□□ -0.42
AC012339.1-201ENST00000505564 VCAM1P19320 739 aa12.43□□□□□ -0.42
AC012339.1-201ENST00000505564 NBR1Q14596 966 aa12.43□□□□□ -0.42
AC012339.1-201ENST00000505564 CCDC178Q5BJE1 867 aa12.43□□□□□ -0.42
AC012339.1-201ENST00000505564 KCNV2Q8TDN2 545 aa12.43□□□□□ -0.42
AC012339.1-201ENST00000505564 STAG1Q8WVM7 1258 aa12.43□□□□□ -0.42
AC012339.1-201ENST00000505564 ESYT1Q9BSJ8 1104 aa12.43□□□□□ -0.42
AC012339.1-201ENST00000505564 KRT23Q9C075 422 aa12.43□□□□□ -0.42
AC012339.1-201ENST00000505564 R3HDMLQ9H3Y0 253 aa12.43□□□□□ -0.42
AC012339.1-201ENST00000505564 RPAP3Q9H6T3 665 aaPredicted RBP12.43□□□□□ -0.42
AC012339.1-201ENST00000505564 VCPKMTQ9H867 229 aa12.43□□□□□ -0.42
AC012339.1-201ENST00000505564 CWC22Q9HCG8 908 aaKnown RBP12.43□□□□□ -0.42
AC012339.1-201ENST00000505564 MTMR4Q9NYA4 1195 aa12.43□□□□□ -0.42
AC012339.1-201ENST00000505564 ISY1Q9ULR0 285 aaKnown RBP12.43□□□□□ -0.42
AC012339.1-201ENST00000505564 SYNPO2Q9UMS6 1093 aa12.43□□□□□ -0.42
AC012339.1-201ENST00000505564 STX8Q9UNK0 236 aa12.43□□□□□ -0.42
AC012339.1-201ENST00000505564 TNRC18O15417 2968 aaPredicted RBP12.43□□□□□ -0.42
AC012339.1-201ENST00000505564 A0A1W2PRG0 241 aa12.42□□□□□ -0.42
AC012339.1-201ENST00000505564 FMNL1O95466 1100 aaPredicted RBP12.42□□□□□ -0.42
AC012339.1-201ENST00000505564 HOXD10P28358 340 aa12.42□□□□□ -0.42
AC012339.1-201ENST00000505564 C17orf99Q6UX52 265 aa12.42□□□□□ -0.42
AC012339.1-201ENST00000505564 IQCA1Q86XH1 822 aa12.42□□□□□ -0.42
AC012339.1-201ENST00000505564 CLEC10AQ8IUN9 316 aa12.42□□□□□ -0.42
AC012339.1-201ENST00000505564 SPICE1Q8N0Z3 855 aa12.42□□□□□ -0.42
AC012339.1-201ENST00000505564 CEP95Q96GE4 821 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms