RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 MYD88Q99836 296 aa4.48□□□□□ -1.69
HMGB1P22-201ENST00000505315 MTFR1LQ9H019 292 aa4.48□□□□□ -1.69
HMGB1P22-201ENST00000505315 EFCC1Q9HA90 598 aa4.48□□□□□ -1.69
HMGB1P22-201ENST00000505315 SLC52A2Q9HAB3 445 aa4.48□□□□□ -1.69
HMGB1P22-201ENST00000505315 TRIM39Q9HCM9 518 aa4.48□□□□□ -1.69
HMGB1P22-201ENST00000505315 NLRC4Q9NPP4 1024 aa4.48□□□□□ -1.69
HMGB1P22-201ENST00000505315 MKS1Q9NXB0 559 aa4.48□□□□□ -1.69
HMGB1P22-201ENST00000505315 KLF15Q9UIH9 416 aa4.48□□□□□ -1.69
HMGB1P22-201ENST00000505315 PNMA8BQ9ULN7 279 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P22-201ENST00000505315 GIT1Q9Y2X7 761 aa4.48□□□□□ -1.69
HMGB1P22-201ENST00000505315 MRFAP1Q9Y605 127 aa4.48□□□□□ -1.69
HMGB1P22-201ENST00000505315 WASHC2AQ641Q2 1341 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 TTC24A2A3L6 582 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 CFAP69A5D8W1 941 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 CHURC1-FNTBB4DL54 471 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 B4E1Z4 1266 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 NFKBIEO00221 500 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 ERC2O15083 957 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 ATXN7O15265 892 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 GAS7O60861 476 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 B3GALT4O96024 378 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 FGFR1P11362 822 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 BMP2P12643 396 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 PHKG2P15735 406 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 EIF2AK2P19525 551 aaKnown RBP4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 GRIA2P42262 883 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 ZNF143P52747 638 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 TRIM14Q14142 442 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 KCTD2Q14681 263 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 ACAP2Q15057 778 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 ZNF423Q2M1K9 1284 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 ATP13A4Q4VNC1 1196 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 WDR44Q5JSH3 913 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 C6orf118Q5T5N4 469 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 LIAT1Q6ZQX7 453 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 MMS22LQ6ZRQ5 1243 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 FCHSD1Q86WN1 690 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 ZNF227Q86WZ6 799 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 MYLK4Q86YV6 388 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 STK11IPQ8N1F8 1099 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 NXPE1Q8N323 547 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 PLPPR2Q96GM1 343 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 AHCYL2Q96HN2 611 aaKnown RBP4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 POP1Q99575 1024 aaKnown RBP4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 GBP3Q9H0R5 595 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 NGRNQ9NPE2 291 aaKnown RBP4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 C9orf78Q9NZ63 289 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 DDX20Q9UHI6 824 aaKnown RBP4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 FBXO2Q9UK22 296 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 PHTF1Q9UMS5 762 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 ZKSCAN5Q9Y2L8 839 aa4.47□□□□□ -1.69
HMGB1P22-201ENST00000505315 FIGNL2A6NMB9 653 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 ZNF891A8MT65 544 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 SPINT1O43278 529 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 ANP32CO43423 234 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 TIMM44O43615 452 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 PIP5K1CO60331 668 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 LTFP02788 710 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 GSTP1P09211 210 aaKnown RBP4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 SETSIPP0DME0 302 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 MYBP10242 640 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 COL6A1P12109 1028 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 TIMP2P16035 220 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 HSPA6P17066 643 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 PTPRAP18433 802 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 CASP2P42575 452 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 SARSP49591 514 aaKnown RBP4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 ETF1P62495 437 aaKnown RBP4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 GSTM4Q03013 218 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 SPEM2Q0P670 501 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 NEUROD1Q13562 356 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 IKBKEQ14164 716 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 INPP5AQ14642 412 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 PCBP2Q15366 365 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 PUM3Q15397 648 aaKnown RBP4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 LONRF1Q17RB8 773 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 RGL3Q3MIN7 710 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 IFIT1BQ5T764 474 aaKnown RBP4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 GPR158Q5T848 1215 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 LRFN4Q6PJG9 635 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 ADAMTSL4Q6UY14 1074 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 DDX53Q86TM3 631 aaKnown RBP4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 CCDC144CPQ8IYA2 1237 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 CLASRPQ8N2M8 674 aaKnown RBP4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 CPA6Q8N4T0 437 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 MEIOBQ8N635 442 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 FAM13CQ8NE31 585 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 PPHLN1Q8NEY8 458 aaKnown RBP4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 GPBAR1Q8TDU6 330 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 CCT6BQ92526 530 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 GJA10Q969M2 543 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 OSBP2Q969R2 916 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 HSPBAP1Q96EW2 488 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 SLC6A18Q96N87 628 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 HAUS7Q99871 368 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 LACRTQ9GZZ8 138 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 ANLNQ9NQW6 1124 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 AAASQ9NRG9 546 aa4.46□□□□□ -1.7
HMGB1P22-201ENST00000505315 SAMD15Q9P1V8 674 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms