RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 C9orf131Q5VYM1 1079 aa9.71□□□□□ -0.86
SF3A1-210ENST00000498259 SLFN13Q68D06 897 aa9.71□□□□□ -0.86
SF3A1-210ENST00000498259 USP50Q70EL3 339 aaPredicted RBP9.71□□□□□ -0.86
SF3A1-210ENST00000498259 SAMD7Q7Z3H4 446 aa9.71□□□□□ -0.86
SF3A1-210ENST00000498259 SULF1Q8IWU6 871 aa9.71□□□□□ -0.86
SF3A1-210ENST00000498259 CHURC1Q8WUH1 139 aa9.71□□□□□ -0.86
SF3A1-210ENST00000498259 CCDC34Q96HJ3 373 aa9.71□□□□□ -0.86
SF3A1-210ENST00000498259 PHF20Q9BVI0 1012 aa9.71□□□□□ -0.86
SF3A1-210ENST00000498259 TMEM39BQ9GZU3 492 aa9.71□□□□□ -0.86
SF3A1-210ENST00000498259 RIOX1Q9H6W3 641 aa9.71□□□□□ -0.86
SF3A1-210ENST00000498259 AS3MTQ9HBK9 375 aa9.71□□□□□ -0.86
SF3A1-210ENST00000498259 BARHL2Q9NY43 387 aa9.71□□□□□ -0.86
SF3A1-210ENST00000498259 RCOR1Q9UKL0 485 aa9.71□□□□□ -0.86
SF3A1-210ENST00000498259 MTMR7Q9Y216 660 aa9.71□□□□□ -0.86
SF3A1-210ENST00000498259 CNTNAP5Q8WYK1 1306 aa9.71□□□□□ -0.86
SF3A1-210ENST00000498259 ZNF541Q9H0D2 1346 aa9.71□□□□□ -0.86
SF3A1-210ENST00000498259 CNTNAP1P78357 1384 aa9.71□□□□□ -0.86
SF3A1-210ENST00000498259 PNMA6FA0A0J9YX94 578 aa9.7□□□□□ -0.86
SF3A1-210ENST00000498259 USP17L5A8MUK1 530 aa9.7□□□□□ -0.86
SF3A1-210ENST00000498259 F5H6K3 240 aa9.7□□□□□ -0.86
SF3A1-210ENST00000498259 RAD21O60216 631 aa9.7□□□□□ -0.86
SF3A1-210ENST00000498259 BMP3P12645 472 aa9.7□□□□□ -0.86
SF3A1-210ENST00000498259 ME1P48163 572 aa9.7□□□□□ -0.86
SF3A1-210ENST00000498259 MRPL12P52815 198 aaKnown RBP9.7□□□□□ -0.86
SF3A1-210ENST00000498259 USP14P54578 494 aa9.7□□□□□ -0.86
SF3A1-210ENST00000498259 KLRC3Q07444 240 aa9.7□□□□□ -0.86
SF3A1-210ENST00000498259 IKQ13123 557 aaPredicted RBP9.7□□□□□ -0.86
SF3A1-210ENST00000498259 GSE1Q14687 1217 aa9.7□□□□□ -0.86
SF3A1-210ENST00000498259 PKN1Q16512 942 aa9.7□□□□□ -0.86
SF3A1-210ENST00000498259 ANGEL2Q5VTE6 544 aaKnown RBP9.7□□□□□ -0.86
SF3A1-210ENST00000498259 ANO1Q5XXA6 986 aa9.7□□□□□ -0.86
SF3A1-210ENST00000498259 USP17L2Q6R6M4 530 aa9.7□□□□□ -0.86
SF3A1-210ENST00000498259 ILDR2Q71H61 639 aa9.7□□□□□ -0.86
SF3A1-210ENST00000498259 HEATR3Q7Z4Q2 680 aa9.7□□□□□ -0.86
SF3A1-210ENST00000498259 PNMA8AQ86V59 439 aaPredicted RBP9.7□□□□□ -0.86
SF3A1-210ENST00000498259 CMTR1Q8N1G2 835 aaKnown RBP9.7□□□□□ -0.86
SF3A1-210ENST00000498259 LRRC47Q8N1G4 583 aaKnown RBP9.7□□□□□ -0.86
SF3A1-210ENST00000498259 LEO1Q8WVC0 666 aaPredicted RBP9.7□□□□□ -0.86
SF3A1-210ENST00000498259 LPAR1Q92633 364 aa9.7□□□□□ -0.86
SF3A1-210ENST00000498259 DNAJC18Q9H819 358 aa9.7□□□□□ -0.86
SF3A1-210ENST00000498259 PICK1Q9NRD5 415 aa9.7□□□□□ -0.86
SF3A1-210ENST00000498259 TFIP11Q9UBB9 837 aaKnown RBP9.7□□□□□ -0.86
SF3A1-210ENST00000498259 ZBTB21Q9ULJ3 1066 aa9.7□□□□□ -0.86
SF3A1-210ENST00000498259 PCDHA4Q9UN74 947 aa9.7□□□□□ -0.86
SF3A1-210ENST00000498259 TMX2Q9Y320 296 aa9.7□□□□□ -0.86
SF3A1-210ENST00000498259 ZNF646O15015 1829 aaPredicted RBP9.7□□□□□ -0.86
SF3A1-210ENST00000498259 CCDC194A0A1B0GVG4 234 aa9.69□□□□□ -0.86
SF3A1-210ENST00000498259 ESYT2A0FGR8 921 aa9.69□□□□□ -0.86
SF3A1-210ENST00000498259 ZBTB5O15062 677 aa9.69□□□□□ -0.86
SF3A1-210ENST00000498259 SPTLC2O15270 562 aa9.69□□□□□ -0.86
SF3A1-210ENST00000498259 PPP1R12BO60237 982 aaPredicted RBP9.69□□□□□ -0.86
SF3A1-210ENST00000498259 PLA2G6O60733 806 aa9.69□□□□□ -0.86
SF3A1-210ENST00000498259 PPFIA3O75145 1194 aa9.69□□□□□ -0.86
SF3A1-210ENST00000498259 PPP6R2O75170 966 aa9.69□□□□□ -0.86
SF3A1-210ENST00000498259 GDF11O95390 407 aa9.69□□□□□ -0.86
SF3A1-210ENST00000498259 FDX1P10109 184 aa9.69□□□□□ -0.86
SF3A1-210ENST00000498259 NASPP49321 788 aaPredicted RBP9.69□□□□□ -0.86
SF3A1-210ENST00000498259 NAPAP54920 295 aa9.69□□□□□ -0.86
SF3A1-210ENST00000498259 ADALQ6DHV7 355 aa9.69□□□□□ -0.86
SF3A1-210ENST00000498259 CCDC73Q6ZRK6 1079 aa9.69□□□□□ -0.86
SF3A1-210ENST00000498259 MIGA2Q7L4E1 593 aa9.69□□□□□ -0.86
SF3A1-210ENST00000498259 KRT25Q7Z3Z0 450 aa9.69□□□□□ -0.86
SF3A1-210ENST00000498259 FAM160B2Q86V87 743 aa9.69□□□□□ -0.86
SF3A1-210ENST00000498259 BLIDQ8IZY5 108 aa9.69□□□□□ -0.86
SF3A1-210ENST00000498259 STAG2Q8N3U4 1231 aa9.69□□□□□ -0.86
SF3A1-210ENST00000498259 DAGLBQ8NCG7 672 aa9.69□□□□□ -0.86
SF3A1-210ENST00000498259 L3MBTL3Q96JM7 780 aaPredicted RBP9.69□□□□□ -0.86
SF3A1-210ENST00000498259 FEZ1Q99689 392 aa9.69□□□□□ -0.86
SF3A1-210ENST00000498259 NAP1L4Q99733 375 aaKnown RBP9.69□□□□□ -0.86
SF3A1-210ENST00000498259 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.69□□□□□ -0.86
SF3A1-210ENST00000498259 VPS54Q9P1Q0 977 aa9.69□□□□□ -0.86
SF3A1-210ENST00000498259 MORC2Q9Y6X9 1032 aaPredicted RBP9.69□□□□□ -0.86
SF3A1-210ENST00000498259 A0A1W2PQ27 194 aa9.68□□□□□ -0.86
SF3A1-210ENST00000498259 A0A1W2PQ64 194 aa9.68□□□□□ -0.86
SF3A1-210ENST00000498259 A0A1W2PQD8 194 aa9.68□□□□□ -0.86
SF3A1-210ENST00000498259 GLTPD2A6NH11 291 aa9.68□□□□□ -0.86
SF3A1-210ENST00000498259 TRIM75PA6NK02 468 aa9.68□□□□□ -0.86
SF3A1-210ENST00000498259 FAM196BA6NMK8 535 aa9.68□□□□□ -0.86
SF3A1-210ENST00000498259 BTBD18B2RXH4 712 aa9.68□□□□□ -0.86
SF3A1-210ENST00000498259 CTAGE5O15320 804 aa9.68□□□□□ -0.86
SF3A1-210ENST00000498259 DDNO94850 711 aaPredicted RBP9.68□□□□□ -0.86
SF3A1-210ENST00000498259 GOLGA8HP0CJ92 632 aa9.68□□□□□ -0.86
SF3A1-210ENST00000498259 YBX3P16989 372 aaKnown RBP eCLIP9.68□□□□□ -0.86
SF3A1-210ENST00000498259 GUCY1A2P33402 732 aa9.68□□□□□ -0.86
SF3A1-210ENST00000498259 STAT2P52630 851 aa9.68□□□□□ -0.86
SF3A1-210ENST00000498259 ORC2Q13416 577 aaPredicted RBP9.68□□□□□ -0.86
SF3A1-210ENST00000498259 SLC39A14Q15043 492 aa9.68□□□□□ -0.86
SF3A1-210ENST00000498259 CCDC183Q5T5S1 534 aa9.68□□□□□ -0.86
SF3A1-210ENST00000498259 OTUD7BQ6GQQ9 843 aa9.68□□□□□ -0.86
SF3A1-210ENST00000498259 HOMER1Q86YM7 354 aa9.68□□□□□ -0.86
SF3A1-210ENST00000498259 AIFM3Q96NN9 605 aa9.68□□□□□ -0.86
SF3A1-210ENST00000498259 PYM1Q9BRP8 204 aaKnown RBP9.68□□□□□ -0.86
SF3A1-210ENST00000498259 ZMYND12Q9H0C1 365 aa9.68□□□□□ -0.86
SF3A1-210ENST00000498259 VAT1LQ9HCJ6 419 aa9.68□□□□□ -0.86
SF3A1-210ENST00000498259 GPCPD1Q9NPB8 672 aa9.68□□□□□ -0.86
SF3A1-210ENST00000498259 DDX19AQ9NUU7 478 aaKnown RBP9.68□□□□□ -0.86
SF3A1-210ENST00000498259 GGA3Q9NZ52 723 aa9.68□□□□□ -0.86
SF3A1-210ENST00000498259 HOOK1Q9UJC3 728 aaKnown RBP9.68□□□□□ -0.86
SF3A1-210ENST00000498259 KCNJ14Q9UNX9 436 aa9.68□□□□□ -0.86
SF3A1-210ENST00000498259 MYH8P13535 1937 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms