RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 LINC01356Q8N9X3 169 aa5.84□□□□□ -1.47
PHC3-216ENST00000497171 SYT8Q8NBV8 401 aa5.84□□□□□ -1.47
PHC3-216ENST00000497171 FRMD6Q96NE9 622 aa5.84□□□□□ -1.47
PHC3-216ENST00000497171 CNTD2Q9H8S5 307 aa5.84□□□□□ -1.47
PHC3-216ENST00000497171 NRDCO43847 1150 aa5.83□□□□□ -1.48
PHC3-216ENST00000497171 MPOP05164 745 aa5.83□□□□□ -1.48
PHC3-216ENST00000497171 PLCG1P19174 1290 aa5.83□□□□□ -1.48
PHC3-216ENST00000497171 RPL6Q02878 288 aaKnown RBP5.83□□□□□ -1.48
PHC3-216ENST00000497171 NLGN1Q8N2Q7 840 aa5.83□□□□□ -1.48
PHC3-216ENST00000497171 MAP6Q96JE9 813 aa5.83□□□□□ -1.48
PHC3-216ENST00000497171 PWWP2AQ96N64 755 aa5.83□□□□□ -1.48
PHC3-216ENST00000497171 CNOT11Q9UKZ1 510 aaKnown RBP5.83□□□□□ -1.48
PHC3-216ENST00000497171 PCDHB5Q9Y5E4 795 aa5.83□□□□□ -1.48
PHC3-216ENST00000497171 ADAMTS20P59510 1910 aa5.83□□□□□ -1.48
PHC3-216ENST00000497171 K7ESM1 405 aa5.82□□□□□ -1.48
PHC3-216ENST00000497171 LRRN2O75325 713 aa5.82□□□□□ -1.48
PHC3-216ENST00000497171 PNLIPP16233 465 aa5.82□□□□□ -1.48
PHC3-216ENST00000497171 YBX1P67809 324 aaKnown RBP5.82□□□□□ -1.48
PHC3-216ENST00000497171 ZNF827Q17R98 1081 aa5.82□□□□□ -1.48
PHC3-216ENST00000497171 FAM129CQ86XR2 697 aa5.82□□□□□ -1.48
PHC3-216ENST00000497171 EBF1Q9UH73 591 aa5.82□□□□□ -1.48
PHC3-216ENST00000497171 BPNT1O95861 308 aa5.81□□□□□ -1.48
PHC3-216ENST00000497171 RLBP1P12271 317 aa5.81□□□□□ -1.48
PHC3-216ENST00000497171 EIF4BP23588 611 aaKnown RBP5.81□□□□□ -1.48
PHC3-216ENST00000497171 CDR1P51861 262 aa5.81□□□□□ -1.48
PHC3-216ENST00000497171 PCBP3P57721 371 aaKnown RBP5.81□□□□□ -1.48
PHC3-216ENST00000497171 FMR1Q06787 632 aaKnown RBP eCLIP5.81□□□□□ -1.48
PHC3-216ENST00000497171 UBXN11Q5T124 520 aa5.81□□□□□ -1.48
PHC3-216ENST00000497171 AGMOQ6ZNB7 445 aa5.81□□□□□ -1.48
PHC3-216ENST00000497171 TMC6Q7Z403 805 aa5.81□□□□□ -1.48
PHC3-216ENST00000497171 ENOX1Q8TC92 643 aaKnown RBP5.81□□□□□ -1.48
PHC3-216ENST00000497171 KREMEN1Q96MU8 473 aa5.81□□□□□ -1.48
PHC3-216ENST00000497171 G6PC3Q9BUM1 346 aa5.81□□□□□ -1.48
PHC3-216ENST00000497171 TAF6LQ9Y6J9 622 aa5.81□□□□□ -1.48
PHC3-216ENST00000497171 RBAK-RBAKDNI3L0D1 243 aa5.8□□□□□ -1.48
PHC3-216ENST00000497171 BRD1O95696 1058 aa5.8□□□□□ -1.48
PHC3-216ENST00000497171 KCNC1P48547 511 aa5.8□□□□□ -1.48
PHC3-216ENST00000497171 LIG3P49916 1009 aa5.8□□□□□ -1.48
PHC3-216ENST00000497171 MAP3K11Q16584 847 aa5.8□□□□□ -1.48
PHC3-216ENST00000497171 SYTL5Q8TDW5 730 aaPredicted RBP5.8□□□□□ -1.48
PHC3-216ENST00000497171 EPB41L4AQ9HCS5 686 aaPredicted RBP5.8□□□□□ -1.48
PHC3-216ENST00000497171 USP40Q9NVE5 1235 aa5.8□□□□□ -1.48
PHC3-216ENST00000497171 SHISA3A0PJX4 238 aa5.79□□□□□ -1.48
PHC3-216ENST00000497171 NOTOA8MTQ0 251 aa5.79□□□□□ -1.48
PHC3-216ENST00000497171 RTP1P59025 263 aa5.79□□□□□ -1.48
PHC3-216ENST00000497171 ERVFRD-1P60508 538 aa5.79□□□□□ -1.48
PHC3-216ENST00000497171 NMIQ13287 307 aaPredicted RBP5.79□□□□□ -1.48
PHC3-216ENST00000497171 LAPTM5Q13571 262 aa5.79□□□□□ -1.48
PHC3-216ENST00000497171 RTP5Q14D33 572 aa5.79□□□□□ -1.48
PHC3-216ENST00000497171 GALNT18Q6P9A2 607 aa5.79□□□□□ -1.48
PHC3-216ENST00000497171 LDHDQ86WU2 507 aa5.79□□□□□ -1.48
PHC3-216ENST00000497171 SLFN12Q8IYM2 578 aa5.79□□□□□ -1.48
PHC3-216ENST00000497171 TMEFF1Q8IYR6 380 aa5.79□□□□□ -1.48
PHC3-216ENST00000497171 PHACTR4Q8IZ21 702 aa5.79□□□□□ -1.48
PHC3-216ENST00000497171 JARID2Q92833 1246 aaPredicted RBP5.79□□□□□ -1.48
PHC3-216ENST00000497171 CCDC74BQ96LY2 380 aa5.79□□□□□ -1.48
PHC3-216ENST00000497171 SETDB2Q96T68 719 aa5.79□□□□□ -1.48
PHC3-216ENST00000497171 GZF1Q9H116 711 aaPredicted RBP5.79□□□□□ -1.48
PHC3-216ENST00000497171 SRRDQ9UH36 339 aa5.79□□□□□ -1.48
PHC3-216ENST00000497171 UPK3BL1B0FP48 263 aa5.78□□□□□ -1.48
PHC3-216ENST00000497171 PATL2C9JE40 543 aaKnown RBP5.78□□□□□ -1.48
PHC3-216ENST00000497171 UPK3BL2E5RIL1 263 aa5.78□□□□□ -1.48
PHC3-216ENST00000497171 SUV39H1O43463 412 aa5.78□□□□□ -1.48
PHC3-216ENST00000497171 ENDOUP21128 410 aaKnown RBP5.78□□□□□ -1.48
PHC3-216ENST00000497171 SDHBP21912 280 aa5.78□□□□□ -1.48
PHC3-216ENST00000497171 RNF4P78317 190 aa5.78□□□□□ -1.48
PHC3-216ENST00000497171 RAB3GAP1Q15042 981 aa5.78□□□□□ -1.48
PHC3-216ENST00000497171 HHIPL2Q6UWX4 724 aa5.78□□□□□ -1.48
PHC3-216ENST00000497171 FOXP3Q9BZS1 431 aa5.78□□□□□ -1.48
PHC3-216ENST00000497171 TCFL5Q9UL49 500 aa5.78□□□□□ -1.48
PHC3-216ENST00000497171 WWC3Q9ULE0 1092 aa5.78□□□□□ -1.48
PHC3-216ENST00000497171 ZNF281Q9Y2X9 895 aa5.78□□□□□ -1.48
PHC3-216ENST00000497171 PFKLP17858 780 aa5.77□□□□□ -1.49
PHC3-216ENST00000497171 KCNA1Q09470 495 aa5.77□□□□□ -1.49
PHC3-216ENST00000497171 TMEM201Q5SNT2 666 aa5.77□□□□□ -1.49
PHC3-216ENST00000497171 IGDCC3Q8IVU1 814 aa5.77□□□□□ -1.49
PHC3-216ENST00000497171 ZNF655Q8N720 491 aaPredicted RBP5.77□□□□□ -1.49
PHC3-216ENST00000497171 HHIPL1Q96JK4 782 aa5.77□□□□□ -1.49
PHC3-216ENST00000497171 KLHL3Q9UH77 587 aa5.77□□□□□ -1.49
PHC3-216ENST00000497171 IVNS1ABPQ9Y6Y0 642 aa5.77□□□□□ -1.49
PHC3-216ENST00000497171 WTIPA6NIX2 430 aaPredicted RBP5.76□□□□□ -1.49
PHC3-216ENST00000497171 BUB1BO60566 1050 aaPredicted RBP5.76□□□□□ -1.49
PHC3-216ENST00000497171 GBP1P32455 592 aa5.76□□□□□ -1.49
PHC3-216ENST00000497171 DAGLBQ8NCG7 672 aa5.76□□□□□ -1.49
PHC3-216ENST00000497171 KRTAP9-8Q9BYQ0 159 aa5.76□□□□□ -1.49
PHC3-216ENST00000497171 TNFRSF10DQ9UBN6 386 aa5.76□□□□□ -1.49
PHC3-216ENST00000497171 CORINQ9Y5Q5 1042 aa5.76□□□□□ -1.49
PHC3-216ENST00000497171 NUDT19A8MXV4 375 aa5.75□□□□□ -1.49
PHC3-216ENST00000497171 FKTNO75072 461 aa5.75□□□□□ -1.49
PHC3-216ENST00000497171 TFE3P19532 575 aaPredicted RBP5.75□□□□□ -1.49
PHC3-216ENST00000497171 GNA15P30679 374 aa5.75□□□□□ -1.49
PHC3-216ENST00000497171 SLURP1P55000 103 aa5.75□□□□□ -1.49
PHC3-216ENST00000497171 CAP1Q01518 475 aa5.75□□□□□ -1.49
PHC3-216ENST00000497171 MLECQ14165 292 aa5.75□□□□□ -1.49
PHC3-216ENST00000497171 ZFYVE27Q5T4F4 411 aa5.75□□□□□ -1.49
PHC3-216ENST00000497171 FCRL2Q96LA5 508 aaPredicted RBP5.75□□□□□ -1.49
PHC3-216ENST00000497171 HDAC8Q9BY41 377 aa5.75□□□□□ -1.49
PHC3-216ENST00000497171 KLHL14Q9P2G3 628 aa5.75□□□□□ -1.49
PHC3-216ENST00000497171 GRIN3BO60391 1043 aa5.74□□□□□ -1.49
PHC3-216ENST00000497171 EFEMP2O95967 443 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms