RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 FSD1Q9BTV5 496 aa15.49■□□□□ 0.07
FN1-226ENST00000496542 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.49■□□□□ 0.07
FN1-226ENST00000496542 PRO3102Q9H379 93 aa15.49■□□□□ 0.07
FN1-226ENST00000496542 FBXO28Q9NVF7 368 aa15.49■□□□□ 0.07
FN1-226ENST00000496542 SZT2Q5T011 3432 aa15.49■□□□□ 0.07
FN1-226ENST00000496542 MYH4Q9Y623 1939 aa15.49■□□□□ 0.07
FN1-226ENST00000496542 STRNO43815 780 aa15.48■□□□□ 0.07
FN1-226ENST00000496542 FAM83BQ5T0W9 1011 aa15.48■□□□□ 0.07
FN1-226ENST00000496542 TRPV1Q8NER1 839 aa15.48■□□□□ 0.07
FN1-226ENST00000496542 CRBNQ96SW2 442 aa15.48■□□□□ 0.07
FN1-226ENST00000496542 MROH8Q9H579 483 aa15.48■□□□□ 0.07
FN1-226ENST00000496542 STAP2Q9UGK3 403 aa15.48■□□□□ 0.07
FN1-226ENST00000496542 COBLO75128 1261 aa15.47■□□□□ 0.07
FN1-226ENST00000496542 PRDM1O75626 825 aa15.47■□□□□ 0.07
FN1-226ENST00000496542 MX1P20591 662 aa15.47■□□□□ 0.07
FN1-226ENST00000496542 TMEM132BQ14DG7 1078 aa15.47■□□□□ 0.07
FN1-226ENST00000496542 SEC62Q99442 399 aaKnown RBP15.47■□□□□ 0.07
FN1-226ENST00000496542 ZBTB47Q9UFB7 747 aaPredicted RBP15.47■□□□□ 0.07
FN1-226ENST00000496542 DDX20Q9UHI6 824 aaKnown RBP15.47■□□□□ 0.07
FN1-226ENST00000496542 PPP1R9AQ9ULJ8 1098 aa15.47■□□□□ 0.07
FN1-226ENST00000496542 LAMA3Q16787 3333 aa15.47■□□□□ 0.07
FN1-226ENST00000496542 MSCO60682 206 aa15.46■□□□□ 0.07
FN1-226ENST00000496542 COL6A1P12109 1028 aa15.46■□□□□ 0.07
FN1-226ENST00000496542 CYBAP13498 195 aa15.46■□□□□ 0.07
FN1-226ENST00000496542 SYN1P17600 705 aa15.46■□□□□ 0.07
FN1-226ENST00000496542 OLFML2BQ68BL8 750 aa15.46■□□□□ 0.07
FN1-226ENST00000496542 NUP88Q99567 741 aaPredicted RBP15.46■□□□□ 0.07
FN1-226ENST00000496542 NACAP1Q9BZK3 213 aa15.46■□□□□ 0.07
FN1-226ENST00000496542 SLC5A4Q9NY91 659 aa15.46■□□□□ 0.07
FN1-226ENST00000496542 DNAH12Q6ZR08 3092 aa15.45■□□□□ 0.06
FN1-226ENST00000496542 PATL2C9JE40 543 aaKnown RBP15.45■□□□□ 0.06
FN1-226ENST00000496542 VWA5AO00534 786 aa15.45■□□□□ 0.06
FN1-226ENST00000496542 SLC25A27O95847 323 aa15.45■□□□□ 0.06
FN1-226ENST00000496542 FCER1AP12319 257 aa15.45■□□□□ 0.06
FN1-226ENST00000496542 IFNL3Q8IZI9 196 aa15.45■□□□□ 0.06
FN1-226ENST00000496542 ZNF444Q8N0Y2 327 aaPredicted RBP15.45■□□□□ 0.06
FN1-226ENST00000496542 ABRAQ8N0Z2 381 aa15.45■□□□□ 0.06
FN1-226ENST00000496542 YTHDC1Q96MU7 727 aaKnown RBP15.45■□□□□ 0.06
FN1-226ENST00000496542 MMP19Q99542 508 aa15.45■□□□□ 0.06
FN1-226ENST00000496542 ZNF287Q9HBT7 754 aa15.45■□□□□ 0.06
FN1-226ENST00000496542 NYAP2Q9P242 653 aa15.45■□□□□ 0.06
FN1-226ENST00000496542 ADAMTS5Q9UNA0 930 aa15.45■□□□□ 0.06
FN1-226ENST00000496542 PLXNA1Q9UIW2 1896 aa15.45■□□□□ 0.06
FN1-226ENST00000496542 NDUFB10O96000 172 aa15.44■□□□□ 0.06
FN1-226ENST00000496542 IGHA2P01877 340 aa15.44■□□□□ 0.06
FN1-226ENST00000496542 STAT3P40763 770 aa15.44■□□□□ 0.06
FN1-226ENST00000496542 LRRC26Q2I0M4 334 aa15.44■□□□□ 0.06
FN1-226ENST00000496542 ZMYM1Q5SVZ6 1142 aa15.44■□□□□ 0.06
FN1-226ENST00000496542 ANKRD45Q5TZF3 282 aa15.44■□□□□ 0.06
FN1-226ENST00000496542 RIOX2Q8IUF8 465 aa15.44■□□□□ 0.06
FN1-226ENST00000496542 SLF1Q9BQI6 1058 aa15.44■□□□□ 0.06
FN1-226ENST00000496542 NAPBQ9H115 298 aa15.44■□□□□ 0.06
FN1-226ENST00000496542 CLIP2Q9UDT6 1046 aa15.44■□□□□ 0.06
FN1-226ENST00000496542 SMCHD1A6NHR9 2005 aa15.43■□□□□ 0.06
FN1-226ENST00000496542 IGKV6D-41A0A0C4DH26 115 aa15.43■□□□□ 0.06
FN1-226ENST00000496542 A0A1W2PPC1 479 aa15.43■□□□□ 0.06
FN1-226ENST00000496542 F5H6K3 240 aa15.43■□□□□ 0.06
FN1-226ENST00000496542 PGK2P07205 417 aa15.43■□□□□ 0.06
FN1-226ENST00000496542 MAGEA10P43363 369 aaPredicted RBP15.43■□□□□ 0.06
FN1-226ENST00000496542 KLRC3Q07444 240 aa15.43■□□□□ 0.06
FN1-226ENST00000496542 PRAMEF19Q5SWL8 479 aa15.43■□□□□ 0.06
FN1-226ENST00000496542 ANO1Q5XXA6 986 aa15.43■□□□□ 0.06
FN1-226ENST00000496542 CCDC129Q6ZRS4 1044 aa15.43■□□□□ 0.06
FN1-226ENST00000496542 REPS2Q8NFH8 660 aa15.43■□□□□ 0.06
FN1-226ENST00000496542 CEP95Q96GE4 821 aa15.43■□□□□ 0.06
FN1-226ENST00000496542 MAML3Q96JK9 1138 aa15.43■□□□□ 0.06
FN1-226ENST00000496542 GDF15Q99988 308 aa15.43■□□□□ 0.06
FN1-226ENST00000496542 SENP6Q9GZR1 1112 aaPredicted RBP15.43■□□□□ 0.06
FN1-226ENST00000496542 ZNF214Q9UL59 606 aaPredicted RBP15.43■□□□□ 0.06
FN1-226ENST00000496542 SALL3Q9BXA9 1300 aa15.43■□□□□ 0.06
FN1-226ENST00000496542 DNM1LO00429 736 aa15.42■□□□□ 0.06
FN1-226ENST00000496542 MYCNP04198 464 aaPredicted RBP15.42■□□□□ 0.06
FN1-226ENST00000496542 SLC3A2P08195 630 aaKnown RBP15.42■□□□□ 0.06
FN1-226ENST00000496542 TSPY3P0CV98 308 aa15.42■□□□□ 0.06
FN1-226ENST00000496542 TSPY8P0CW00 308 aa15.42■□□□□ 0.06
FN1-226ENST00000496542 COPB2P35606 906 aa15.42■□□□□ 0.06
FN1-226ENST00000496542 PDE4BQ07343 736 aa15.42■□□□□ 0.06
FN1-226ENST00000496542 KCTD2Q14681 263 aa15.42■□□□□ 0.06
FN1-226ENST00000496542 GJC2Q5T442 439 aaPredicted RBP15.42■□□□□ 0.06
FN1-226ENST00000496542 LRRC47Q8N1G4 583 aaKnown RBP15.42■□□□□ 0.06
FN1-226ENST00000496542 MTMR4Q9NYA4 1195 aa15.42■□□□□ 0.06
FN1-226ENST00000496542 PLIN4Q96Q06 1357 aa15.41■□□□□ 0.06
FN1-226ENST00000496542 SEPT4O43236 478 aa15.41■□□□□ 0.06
FN1-226ENST00000496542 TTLL1O95922 423 aa15.41■□□□□ 0.06
FN1-226ENST00000496542 SLC4A3P48751 1232 aa15.41■□□□□ 0.06
FN1-226ENST00000496542 ATN1P54259 1190 aaPredicted RBP15.41■□□□□ 0.06
FN1-226ENST00000496542 PPARAQ07869 468 aa15.41■□□□□ 0.06
FN1-226ENST00000496542 FAM47AQ5JRC9 791 aa15.41■□□□□ 0.06
FN1-226ENST00000496542 SNRNP48Q6IEG0 339 aaKnown RBP15.41■□□□□ 0.06
FN1-226ENST00000496542 TEX13BQ9BXU2 312 aa15.41■□□□□ 0.06
FN1-226ENST00000496542 ISY1Q9ULR0 285 aaKnown RBP15.41■□□□□ 0.06
FN1-226ENST00000496542 CTDP1Q9Y5B0 961 aaPredicted RBP15.41■□□□□ 0.06
FN1-226ENST00000496542 KBTBD13C9JR72 458 aa15.4■□□□□ 0.06
FN1-226ENST00000496542 SOX1O00570 391 aaPredicted RBP15.4■□□□□ 0.06
FN1-226ENST00000496542 BMP8BP34820 402 aa15.4■□□□□ 0.06
FN1-226ENST00000496542 TFAP4Q01664 338 aa15.4■□□□□ 0.06
FN1-226ENST00000496542 HDAC1Q13547 482 aaPredicted RBP15.4■□□□□ 0.06
FN1-226ENST00000496542 PRPF38AQ8NAV1 312 aaKnown RBP15.4■□□□□ 0.06
FN1-226ENST00000496542 ARRDC4Q8NCT1 418 aa15.4■□□□□ 0.06
FN1-226ENST00000496542 NEDD1Q8NHV4 660 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms