RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 KIF2AO00139 706 aaPredicted RBP16.84■□□□□ 0.29
CHTOP-206ENST00000495554 SRGNP10124 158 aa16.84■□□□□ 0.29
CHTOP-206ENST00000495554 VEGFAP15692 232 aaPredicted RBP16.84■□□□□ 0.29
CHTOP-206ENST00000495554 ATP2C1P98194 919 aaPredicted RBP16.84■□□□□ 0.29
CHTOP-206ENST00000495554 ZNF174Q15697 407 aa16.84■□□□□ 0.29
CHTOP-206ENST00000495554 VSTM4Q8IW00 320 aa16.84■□□□□ 0.29
CHTOP-206ENST00000495554 GRAMD1CQ8IYS0 662 aa16.84■□□□□ 0.29
CHTOP-206ENST00000495554 DPF2Q92785 391 aa16.84■□□□□ 0.29
CHTOP-206ENST00000495554 SYMPKQ92797 1274 aaKnown RBP16.84■□□□□ 0.29
CHTOP-206ENST00000495554 DHX58Q96C10 678 aa16.84■□□□□ 0.29
CHTOP-206ENST00000495554 TRMT1Q9NXH9 659 aaKnown RBP16.84■□□□□ 0.29
CHTOP-206ENST00000495554 ATP6V0A2Q9Y487 856 aa16.84■□□□□ 0.29
CHTOP-206ENST00000495554 PPEF1O14829 653 aaPredicted RBP16.84■□□□□ 0.29
CHTOP-206ENST00000495554 APBA3O96018 575 aa16.84■□□□□ 0.29
CHTOP-206ENST00000495554 RHBDL3P58872 404 aa16.84■□□□□ 0.29
CHTOP-206ENST00000495554 CT47A1Q5JQC4 288 aaPredicted RBP16.84■□□□□ 0.29
CHTOP-206ENST00000495554 CERS3Q8IU89 383 aa16.84■□□□□ 0.29
CHTOP-206ENST00000495554 SLC44A5Q8NCS7 719 aa16.84■□□□□ 0.29
CHTOP-206ENST00000495554 LRRC37AA6NMS7 1700 aa16.83■□□□□ 0.28
CHTOP-206ENST00000495554 PSDA5PKW4 1024 aaPredicted RBP16.83■□□□□ 0.28
CHTOP-206ENST00000495554 CALML3P27482 149 aa16.83■□□□□ 0.28
CHTOP-206ENST00000495554 GRIPAP1Q4V328 841 aa16.83■□□□□ 0.28
CHTOP-206ENST00000495554 E4F1Q66K89 784 aaPredicted RBP16.83■□□□□ 0.28
CHTOP-206ENST00000495554 TMC4Q7Z404 712 aa16.83■□□□□ 0.28
CHTOP-206ENST00000495554 PNMA1Q8ND90 353 aa16.83■□□□□ 0.28
CHTOP-206ENST00000495554 MKNK2Q9HBH9 465 aa16.83■□□□□ 0.28
CHTOP-206ENST00000495554 NFE2L3Q9Y4A8 694 aa16.83■□□□□ 0.28
CHTOP-206ENST00000495554 FAM205AQ6ZU69 1335 aa16.83■□□□□ 0.28
CHTOP-206ENST00000495554 WNT7AO00755 349 aa16.83■□□□□ 0.28
CHTOP-206ENST00000495554 ERCC5P28715 1186 aaPredicted RBP16.83■□□□□ 0.28
CHTOP-206ENST00000495554 PTGDRQ13258 359 aa16.83■□□□□ 0.28
CHTOP-206ENST00000495554 SH3RF1Q7Z6J0 888 aa16.83■□□□□ 0.28
CHTOP-206ENST00000495554 ZNF592Q92610 1267 aa16.83■□□□□ 0.28
CHTOP-206ENST00000495554 SH3GLB2Q9NR46 395 aa16.83■□□□□ 0.28
CHTOP-206ENST00000495554 SAP30BPQ9UHR5 308 aaKnown RBP16.83■□□□□ 0.28
CHTOP-206ENST00000495554 A0A087X0B3 334 aa16.82■□□□□ 0.28
CHTOP-206ENST00000495554 USP17L3A6NCW0 530 aa16.82■□□□□ 0.28
CHTOP-206ENST00000495554 USP17L4A6NCW7 530 aa16.82■□□□□ 0.28
CHTOP-206ENST00000495554 TOP1P11387 765 aaKnown RBP16.82■□□□□ 0.28
CHTOP-206ENST00000495554 ZNF18P17022 549 aa16.82■□□□□ 0.28
CHTOP-206ENST00000495554 GNAQP50148 359 aa16.82■□□□□ 0.28
CHTOP-206ENST00000495554 FMR1Q06787 632 aaKnown RBP eCLIP16.82■□□□□ 0.28
CHTOP-206ENST00000495554 NOM1Q5C9Z4 860 aaKnown RBP16.82■□□□□ 0.28
CHTOP-206ENST00000495554 PIK3AP1Q6ZUJ8 805 aa16.82■□□□□ 0.28
CHTOP-206ENST00000495554 USP17L1Q7RTZ2 530 aa16.82■□□□□ 0.28
CHTOP-206ENST00000495554 TCP11L1Q9NUJ3 509 aa16.82■□□□□ 0.28
CHTOP-206ENST00000495554 GAKO14976 1311 aa16.82■□□□□ 0.28
CHTOP-206ENST00000495554 CDK5RAP2Q96SN8 1893 aa16.82■□□□□ 0.28
CHTOP-206ENST00000495554 RIMBP2O15034 1052 aa16.82■□□□□ 0.28
CHTOP-206ENST00000495554 HMGB2P26583 209 aaKnown RBP16.82■□□□□ 0.28
CHTOP-206ENST00000495554 PAGE5Q96GU1 130 aa16.82■□□□□ 0.28
CHTOP-206ENST00000495554 NRXN2Q9P2S2 1712 aa16.81■□□□□ 0.28
CHTOP-206ENST00000495554 VWA3AA6NCI4 1184 aa16.81■□□□□ 0.28
CHTOP-206ENST00000495554 TSPY3P0CV98 308 aa16.81■□□□□ 0.28
CHTOP-206ENST00000495554 TSPY8P0CW00 308 aa16.81■□□□□ 0.28
CHTOP-206ENST00000495554 RASA1P20936 1047 aa16.81■□□□□ 0.28
CHTOP-206ENST00000495554 GTF2IP78347 998 aa16.81■□□□□ 0.28
CHTOP-206ENST00000495554 SYCP1Q15431 976 aa16.81■□□□□ 0.28
CHTOP-206ENST00000495554 ZNF444Q8N0Y2 327 aaPredicted RBP16.81■□□□□ 0.28
CHTOP-206ENST00000495554 TBC1D22AQ8WUA7 517 aa16.81■□□□□ 0.28
CHTOP-206ENST00000495554 TEX11Q8IYF3 940 aa16.81■□□□□ 0.28
CHTOP-206ENST00000495554 KIF18AQ8NI77 898 aa16.81■□□□□ 0.28
CHTOP-206ENST00000495554 GSDMAQ96QA5 445 aa16.81■□□□□ 0.28
CHTOP-206ENST00000495554 PYM1Q9BRP8 204 aaKnown RBP16.81■□□□□ 0.28
CHTOP-206ENST00000495554 ZNF287Q9HBT7 754 aa16.81■□□□□ 0.28
CHTOP-206ENST00000495554 ADAMTS3O15072 1205 aa16.8■□□□□ 0.28
CHTOP-206ENST00000495554 AFMP43652 599 aa16.8■□□□□ 0.28
CHTOP-206ENST00000495554 GRM4Q14833 912 aa16.8■□□□□ 0.28
CHTOP-206ENST00000495554 STAG2Q8N3U4 1231 aa16.8■□□□□ 0.28
CHTOP-206ENST00000495554 CCP110O43303 1012 aa16.8■□□□□ 0.28
CHTOP-206ENST00000495554 TUBB4AP04350 444 aa16.8■□□□□ 0.28
CHTOP-206ENST00000495554 NPR1P16066 1061 aa16.8■□□□□ 0.28
CHTOP-206ENST00000495554 BLIDQ8IZY5 108 aa16.8■□□□□ 0.28
CHTOP-206ENST00000495554 ANKRD7Q92527 254 aa16.8■□□□□ 0.28
CHTOP-206ENST00000495554 PPP1R13BQ96KQ4 1090 aa16.8■□□□□ 0.28
CHTOP-206ENST00000495554 COA1Q9GZY4 146 aa16.8■□□□□ 0.28
CHTOP-206ENST00000495554 TMX1Q9H3N1 280 aa16.8■□□□□ 0.28
CHTOP-206ENST00000495554 INTS13Q9NVM9 706 aa16.8■□□□□ 0.28
CHTOP-206ENST00000495554 FLT1P17948 1338 aa16.8■□□□□ 0.28
CHTOP-206ENST00000495554 NAV1Q8NEY1 1877 aa16.79■□□□□ 0.28
CHTOP-206ENST00000495554 TMEM232C9JQI7 657 aa16.79■□□□□ 0.28
CHTOP-206ENST00000495554 MMP10P09238 476 aa16.79■□□□□ 0.28
CHTOP-206ENST00000495554 CDK8P49336 464 aa16.79■□□□□ 0.28
CHTOP-206ENST00000495554 SLC35G1Q2M3R5 365 aa16.79■□□□□ 0.28
CHTOP-206ENST00000495554 ARL6IP4Q66PJ3 421 aaKnown RBP16.79■□□□□ 0.28
CHTOP-206ENST00000495554 ZNF772Q68DY9 489 aaPredicted RBP16.79■□□□□ 0.28
CHTOP-206ENST00000495554 CERS5Q8N5B7 392 aa16.79■□□□□ 0.28
CHTOP-206ENST00000495554 IQUBQ8NA54 791 aa16.79■□□□□ 0.28
CHTOP-206ENST00000495554 MCM7P33993 719 aa16.79■□□□□ 0.28
CHTOP-206ENST00000495554 DPYDQ12882 1025 aa16.79■□□□□ 0.28
CHTOP-206ENST00000495554 C16orf86Q6ZW13 317 aa16.79■□□□□ 0.28
CHTOP-206ENST00000495554 TRMT44Q8IYL2 757 aaKnown RBP16.79■□□□□ 0.28
CHTOP-206ENST00000495554 MED15Q96RN5 788 aa16.79■□□□□ 0.28
CHTOP-206ENST00000495554 MAD2L2Q9UI95 211 aa16.79■□□□□ 0.28
CHTOP-206ENST00000495554 PCDHA4Q9UN74 947 aa16.79■□□□□ 0.28
CHTOP-206ENST00000495554 DAGLAQ9Y4D2 1042 aa16.79■□□□□ 0.28
CHTOP-206ENST00000495554 PLCG2P16885 1265 aa16.78■□□□□ 0.28
CHTOP-206ENST00000495554 HSP90AA4PQ58FG1 418 aa16.78■□□□□ 0.28
CHTOP-206ENST00000495554 FAM193AP78312 1265 aa16.78■□□□□ 0.28
CHTOP-206ENST00000495554 GALNT17Q6IS24 598 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms