RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 HS2ST1Q7LGA3 356 aa7.15□□□□□ -1.26
SMC4-224ENST00000494612 PRRT2Q7Z6L0 340 aaPredicted RBP7.15□□□□□ -1.26
SMC4-224ENST00000494612 IRF2BP1Q8IU81 584 aa7.15□□□□□ -1.26
SMC4-224ENST00000494612 OXR1Q8N573 874 aa7.15□□□□□ -1.26
SMC4-224ENST00000494612 RTEL1Q9NZ71 1219 aa7.15□□□□□ -1.26
SMC4-224ENST00000494612 MYOCOSA0A1B0GUC4 107 aa7.14□□□□□ -1.27
SMC4-224ENST00000494612 SEMA7AO75326 666 aa7.14□□□□□ -1.27
SMC4-224ENST00000494612 USP48Q86UV5 1035 aa7.14□□□□□ -1.27
SMC4-224ENST00000494612 MARCH10Q8NA82 808 aaPredicted RBP7.14□□□□□ -1.27
SMC4-224ENST00000494612 CXorf38Q8TB03 319 aa7.14□□□□□ -1.27
SMC4-224ENST00000494612 GATAD2BQ8WXI9 593 aa7.14□□□□□ -1.27
SMC4-224ENST00000494612 DHX38Q92620 1227 aaKnown RBP7.14□□□□□ -1.27
SMC4-224ENST00000494612 SHISA4Q96DD7 197 aa7.14□□□□□ -1.27
SMC4-224ENST00000494612 VWCEQ96DN2 955 aa7.14□□□□□ -1.27
SMC4-224ENST00000494612 MCOLN1Q9GZU1 580 aa7.14□□□□□ -1.27
SMC4-224ENST00000494612 CWC22Q9HCG8 908 aaKnown RBP7.14□□□□□ -1.27
SMC4-224ENST00000494612 METTL5Q9NRN9 209 aaKnown RBP7.14□□□□□ -1.27
SMC4-224ENST00000494612 KBTBD4Q9NVX7 518 aa7.14□□□□□ -1.27
SMC4-224ENST00000494612 YBX2Q9Y2T7 364 aaKnown RBP7.14□□□□□ -1.27
SMC4-224ENST00000494612 SHISA3A0PJX4 238 aa7.13□□□□□ -1.27
SMC4-224ENST00000494612 RFXAPO00287 272 aa7.13□□□□□ -1.27
SMC4-224ENST00000494612 PEX10O60683 326 aa7.13□□□□□ -1.27
SMC4-224ENST00000494612 F13A1P00488 732 aa7.13□□□□□ -1.27
SMC4-224ENST00000494612 GBP2P32456 591 aaPredicted RBP7.13□□□□□ -1.27
SMC4-224ENST00000494612 RACK1P63244 317 aaKnown RBP7.13□□□□□ -1.27
SMC4-224ENST00000494612 TEKQ02763 1124 aa7.13□□□□□ -1.27
SMC4-224ENST00000494612 RAD51AP2Q09MP3 1159 aa7.13□□□□□ -1.27
SMC4-224ENST00000494612 RELL1Q8IUW5 271 aa7.13□□□□□ -1.27
SMC4-224ENST00000494612 TMEM151BQ8IW70 566 aa7.13□□□□□ -1.27
SMC4-224ENST00000494612 LINC01599Q8WXQ3 324 aa7.13□□□□□ -1.27
SMC4-224ENST00000494612 KREMEN1Q96MU8 473 aa7.13□□□□□ -1.27
SMC4-224ENST00000494612 SLC6A17Q9H1V8 727 aa7.13□□□□□ -1.27
SMC4-224ENST00000494612 ACBD3Q9H3P7 528 aa7.13□□□□□ -1.27
SMC4-224ENST00000494612 ZNF552Q9H707 407 aaPredicted RBP7.13□□□□□ -1.27
SMC4-224ENST00000494612 CHURC1-FNTBB4DL54 471 aa7.12□□□□□ -1.27
SMC4-224ENST00000494612 PF4P02776 101 aa7.12□□□□□ -1.27
SMC4-224ENST00000494612 LTKP29376 864 aa7.12□□□□□ -1.27
SMC4-224ENST00000494612 TNNI2P48788 182 aa7.12□□□□□ -1.27
SMC4-224ENST00000494612 SNX17Q15036 470 aa7.12□□□□□ -1.27
SMC4-224ENST00000494612 ZNF605Q86T29 641 aa7.12□□□□□ -1.27
SMC4-224ENST00000494612 SPPL2CQ8IUH8 684 aa7.12□□□□□ -1.27
SMC4-224ENST00000494612 INTS4Q96HW7 963 aaKnown RBP7.12□□□□□ -1.27
SMC4-224ENST00000494612 RHOVQ96L33 236 aa7.12□□□□□ -1.27
SMC4-224ENST00000494612 REV1Q9UBZ9 1251 aa7.12□□□□□ -1.27
SMC4-224ENST00000494612 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.12□□□□□ -1.27
SMC4-224ENST00000494612 POLR3KQ9Y2Y1 108 aaPredicted RBP7.12□□□□□ -1.27
SMC4-224ENST00000494612 NOTOA8MTQ0 251 aa7.11□□□□□ -1.27
SMC4-224ENST00000494612 DNAJA2O60884 412 aa7.11□□□□□ -1.27
SMC4-224ENST00000494612 SASH1O94885 1247 aa7.11□□□□□ -1.27
SMC4-224ENST00000494612 FAM160A1Q05DH4 1040 aa7.11□□□□□ -1.27
SMC4-224ENST00000494612 GGNQ86UU5 652 aa7.11□□□□□ -1.27
SMC4-224ENST00000494612 CCDC74BQ96LY2 380 aa7.11□□□□□ -1.27
SMC4-224ENST00000494612 G6PC3Q9BUM1 346 aa7.11□□□□□ -1.27
SMC4-224ENST00000494612 ASPNQ9BXN1 380 aa7.11□□□□□ -1.27
SMC4-224ENST00000494612 CCSER2Q9H7U1 834 aa7.11□□□□□ -1.27
SMC4-224ENST00000494612 CAPN10Q9HC96 672 aa7.11□□□□□ -1.27
SMC4-224ENST00000494612 KCTD3Q9Y597 815 aa7.11□□□□□ -1.27
SMC4-224ENST00000494612 BPNT1O95861 308 aa7.1□□□□□ -1.27
SMC4-224ENST00000494612 CELA3BP08861 270 aa7.1□□□□□ -1.27
SMC4-224ENST00000494612 CHRNEQ04844 493 aa7.1□□□□□ -1.27
SMC4-224ENST00000494612 SKOR2Q2VWA4 1001 aaPredicted RBP7.1□□□□□ -1.27
SMC4-224ENST00000494612 DIEXFQ68CQ4 756 aaKnown RBP7.1□□□□□ -1.27
SMC4-224ENST00000494612 ERMP1Q7Z2K6 904 aa7.1□□□□□ -1.27
SMC4-224ENST00000494612 RSRP1Q9BUV0 290 aa7.1□□□□□ -1.27
SMC4-224ENST00000494612 GCM1Q9NP62 436 aa7.1□□□□□ -1.27
SMC4-224ENST00000494612 DDX41Q9UJV9 622 aaKnown RBP7.1□□□□□ -1.27
SMC4-224ENST00000494612 TEX51A0A1B0GUA7 166 aa7.09□□□□□ -1.27
SMC4-224ENST00000494612 PSPNO60542 156 aa7.09□□□□□ -1.27
SMC4-224ENST00000494612 TRIM13O60858 407 aa7.09□□□□□ -1.27
SMC4-224ENST00000494612 HTR3BO95264 441 aa7.09□□□□□ -1.27
SMC4-224ENST00000494612 ANKS4BQ8N8V4 417 aa7.09□□□□□ -1.27
SMC4-224ENST00000494612 TMEM74Q96NL1 305 aa7.09□□□□□ -1.27
SMC4-224ENST00000494612 TMPRSS5Q9H3S3 457 aa7.09□□□□□ -1.27
SMC4-224ENST00000494612 EFEMP2O95967 443 aa7.08□□□□□ -1.28
SMC4-224ENST00000494612 ADRB1P08588 477 aa7.08□□□□□ -1.28
SMC4-224ENST00000494612 DUSP4Q13115 394 aa7.08□□□□□ -1.28
SMC4-224ENST00000494612 NAALADL2Q58DX5 795 aa7.08□□□□□ -1.28
SMC4-224ENST00000494612 ZNF654Q8IZM8 581 aa7.08□□□□□ -1.28
SMC4-224ENST00000494612 ENOX1Q8TC92 643 aaKnown RBP7.08□□□□□ -1.28
SMC4-224ENST00000494612 SYTL4Q96C24 671 aaPredicted RBP7.08□□□□□ -1.28
SMC4-224ENST00000494612 TGIF2Q9GZN2 237 aa7.08□□□□□ -1.28
SMC4-224ENST00000494612 GRIN3BO60391 1043 aa7.07□□□□□ -1.28
SMC4-224ENST00000494612 GARTP22102 1010 aa7.07□□□□□ -1.28
SMC4-224ENST00000494612 USHBP1Q8N6Y0 703 aa7.07□□□□□ -1.28
SMC4-224ENST00000494612 KIF2CQ99661 725 aa7.07□□□□□ -1.28
SMC4-224ENST00000494612 KLHL3Q9UH77 587 aa7.07□□□□□ -1.28
SMC4-224ENST00000494612 ADAMTS1Q9UHI8 967 aa7.07□□□□□ -1.28
SMC4-224ENST00000494612 GPR160Q9UJ42 338 aa7.07□□□□□ -1.28
SMC4-224ENST00000494612 RGS13O14921 159 aa7.06□□□□□ -1.28
SMC4-224ENST00000494612 PDE6BP35913 854 aa7.06□□□□□ -1.28
SMC4-224ENST00000494612 EIF4A3P38919 411 aaKnown RBP7.06□□□□□ -1.28
SMC4-224ENST00000494612 ZC3H6P61129 1189 aaKnown RBP7.06□□□□□ -1.28
SMC4-224ENST00000494612 NLRX1Q86UT6 975 aa7.06□□□□□ -1.28
SMC4-224ENST00000494612 GOLM1Q8NBJ4 401 aa7.06□□□□□ -1.28
SMC4-224ENST00000494612 ZNF296Q8WUU4 475 aaPredicted RBP7.06□□□□□ -1.28
SMC4-224ENST00000494612 SPON2Q9BUD6 331 aa7.06□□□□□ -1.28
SMC4-224ENST00000494612 SGPP1Q9BX95 441 aa7.06□□□□□ -1.28
SMC4-224ENST00000494612 KRTAP9-8Q9BYQ0 159 aa7.06□□□□□ -1.28
SMC4-224ENST00000494612 PPP1R1BQ9UD71 204 aaPredicted RBP7.06□□□□□ -1.28
SMC4-224ENST00000494612 INPP5FQ9Y2H2 1132 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms