RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 FBXO18Q8NFZ0 1043 aa16.31■□□□□ 0.2
PDZRN3-210ENST00000492909 V9GY48 417 aaPredicted RBP16.31■□□□□ 0.2
PDZRN3-210ENST00000492909 SSC5DA1L4H1 1573 aa16.3■□□□□ 0.2
PDZRN3-210ENST00000492909 UBE2Q2LH0YL09 131 aa16.3■□□□□ 0.2
PDZRN3-210ENST00000492909 GPATCH4Q5T3I0 446 aaKnown RBP16.3■□□□□ 0.2
PDZRN3-210ENST00000492909 GMCL1P1Q8NEA9 526 aa16.3■□□□□ 0.2
PDZRN3-210ENST00000492909 AIFM3Q96NN9 605 aa16.3■□□□□ 0.2
PDZRN3-210ENST00000492909 ZNF112Q9UJU3 913 aa16.3■□□□□ 0.2
PDZRN3-210ENST00000492909 ATP6V1DQ9Y5K8 247 aa16.3■□□□□ 0.2
PDZRN3-210ENST00000492909 RAD21O60216 631 aa16.29■□□□□ 0.2
PDZRN3-210ENST00000492909 SMARCA1P28370 1054 aa16.29■□□□□ 0.2
PDZRN3-210ENST00000492909 GUCY1B3Q02153 619 aa16.29■□□□□ 0.2
PDZRN3-210ENST00000492909 ZNF543Q08ER8 600 aa16.29■□□□□ 0.2
PDZRN3-210ENST00000492909 TRIM29Q14134 588 aa16.29■□□□□ 0.2
PDZRN3-210ENST00000492909 DCAF4Q8WV16 495 aa16.29■□□□□ 0.2
PDZRN3-210ENST00000492909 SPZ1Q9BXG8 430 aa16.29■□□□□ 0.2
PDZRN3-210ENST00000492909 TCHHQ07283 1943 aa16.29■□□□□ 0.2
PDZRN3-210ENST00000492909 FRMPD2Q68DX3 1309 aaPredicted RBP16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 A0A1W2PRG0 241 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 F5H6K3 240 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 INPP5BP32019 993 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 SLC1A4P43007 532 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 KLRC3Q07444 240 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 FSTL1Q12841 308 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 CCDC96Q2M329 555 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 SKOR2Q2VWA4 1001 aaPredicted RBP16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 SLFN13Q68D06 897 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 FERMT3Q86UX7 667 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 WRNIP1Q96S55 665 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 GZF1Q9H116 711 aaPredicted RBP16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 SH2D4AQ9H788 454 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 TMX2Q9Y320 296 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 hCG_1642624A0A1W2PR95 340 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 CYTH3O43739 400 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 BAG4O95429 457 aaKnown RBP16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 XBP1P17861 261 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 ECE1P42892 770 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 PKN1Q16512 942 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 OTUD7BQ6GQQ9 843 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 FAM43AQ8N2R8 423 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 KLRG1Q96E93 195 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 ZSCAN16Q9H4T2 348 aaPredicted RBP16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 GOPCQ9HD26 462 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 GPCPD1Q9NPB8 672 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 GJB4Q9NTQ9 266 aa16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 ISY1Q9ULR0 285 aaKnown RBP16.28■□□□□ 0.2
PDZRN3-210ENST00000492909 XRCC6P12956 609 aaKnown RBP eCLIP16.27■□□□□ 0.2
PDZRN3-210ENST00000492909 C1QTNF8P60827 252 aa16.27■□□□□ 0.2
PDZRN3-210ENST00000492909 KRT40Q6A162 431 aa16.27■□□□□ 0.2
PDZRN3-210ENST00000492909 MCTP1Q6DN14 999 aa16.27■□□□□ 0.2
PDZRN3-210ENST00000492909 SCYL3Q8IZE3 742 aa16.27■□□□□ 0.2
PDZRN3-210ENST00000492909 ACER1Q8TDN7 264 aa16.27■□□□□ 0.2
PDZRN3-210ENST00000492909 GMCL1Q96IK5 515 aa16.27■□□□□ 0.2
PDZRN3-210ENST00000492909 ZNF408Q9H9D4 720 aa16.27■□□□□ 0.2
PDZRN3-210ENST00000492909 MYH15Q9Y2K3 1946 aa16.27■□□□□ 0.19
PDZRN3-210ENST00000492909 PASKQ96RG2 1323 aa16.26■□□□□ 0.19
PDZRN3-210ENST00000492909 NDUFB10O96000 172 aa16.26■□□□□ 0.19
PDZRN3-210ENST00000492909 SCG2P13521 617 aa16.26■□□□□ 0.19
PDZRN3-210ENST00000492909 NF2P35240 595 aa16.26■□□□□ 0.19
PDZRN3-210ENST00000492909 PFKFB3Q16875 520 aaPredicted RBP16.26■□□□□ 0.19
PDZRN3-210ENST00000492909 SLC35G1Q2M3R5 365 aa16.26■□□□□ 0.19
PDZRN3-210ENST00000492909 FOXD4L6Q3SYB3 417 aaPredicted RBP16.26■□□□□ 0.19
PDZRN3-210ENST00000492909 FOXD4L3Q6VB84 417 aaPredicted RBP16.26■□□□□ 0.19
PDZRN3-210ENST00000492909 KCTD1Q719H9 257 aa16.26■□□□□ 0.19
PDZRN3-210ENST00000492909 PIBF1Q8WXW3 757 aa16.26■□□□□ 0.19
PDZRN3-210ENST00000492909 UBA5Q9GZZ9 404 aa16.26■□□□□ 0.19
PDZRN3-210ENST00000492909 CPVLQ9H3G5 476 aa16.26■□□□□ 0.19
PDZRN3-210ENST00000492909 FZD1Q9UP38 647 aa16.26■□□□□ 0.19
PDZRN3-210ENST00000492909 PPP1R12BO60237 982 aaPredicted RBP16.26■□□□□ 0.19
PDZRN3-210ENST00000492909 RESTQ13127 1097 aa16.26■□□□□ 0.19
PDZRN3-210ENST00000492909 CCDC84Q86UT8 332 aaPredicted RBP16.26■□□□□ 0.19
PDZRN3-210ENST00000492909 ZKSCAN4Q969J2 545 aaPredicted RBP16.26■□□□□ 0.19
PDZRN3-210ENST00000492909 RRP36Q96EU6 259 aaKnown RBP16.26■□□□□ 0.19
PDZRN3-210ENST00000492909 CDCA5Q96FF9 252 aa16.26■□□□□ 0.19
PDZRN3-210ENST00000492909 FEZ1Q99689 392 aa16.26■□□□□ 0.19
PDZRN3-210ENST00000492909 RIOX1Q9H6W3 641 aa16.26■□□□□ 0.19
PDZRN3-210ENST00000492909 PICK1Q9NRD5 415 aa16.26■□□□□ 0.19
PDZRN3-210ENST00000492909 GOLGA6L22H0YM25 854 aa16.25■□□□□ 0.19
PDZRN3-210ENST00000492909 USP2O75604 605 aaPredicted RBP16.25■□□□□ 0.19
PDZRN3-210ENST00000492909 MRE11P49959 708 aa16.25■□□□□ 0.19
PDZRN3-210ENST00000492909 VCPKMTQ9H867 229 aa16.25■□□□□ 0.19
PDZRN3-210ENST00000492909 SEC63Q9UGP8 760 aaKnown RBP16.25■□□□□ 0.19
PDZRN3-210ENST00000492909 CELF2O95319 508 aaKnown RBP16.24■□□□□ 0.19
PDZRN3-210ENST00000492909 BMP3P12645 472 aa16.24■□□□□ 0.19
PDZRN3-210ENST00000492909 PRKG1Q13976 671 aa16.24■□□□□ 0.19
PDZRN3-210ENST00000492909 SAFBQ15424 915 aaKnown RBP eCLIP16.24■□□□□ 0.19
PDZRN3-210ENST00000492909 NOL9Q5SY16 702 aaKnown RBP16.24■□□□□ 0.19
PDZRN3-210ENST00000492909 CST9Q5W186 159 aa16.24■□□□□ 0.19
PDZRN3-210ENST00000492909 TTBK2Q6IQ55 1244 aa16.24■□□□□ 0.19
PDZRN3-210ENST00000492909 SPICE1Q8N0Z3 855 aa16.24■□□□□ 0.19
PDZRN3-210ENST00000492909 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.24■□□□□ 0.19
PDZRN3-210ENST00000492909 VAT1LQ9HCJ6 419 aa16.24■□□□□ 0.19
PDZRN3-210ENST00000492909 VPS54Q9P1Q0 977 aa16.24■□□□□ 0.19
PDZRN3-210ENST00000492909 OTOFQ9HC10 1997 aa16.24■□□□□ 0.19
PDZRN3-210ENST00000492909 PAPPA2Q9BXP8 1791 aa16.24■□□□□ 0.19
PDZRN3-210ENST00000492909 PHIPQ8WWQ0 1821 aa16.23■□□□□ 0.19
PDZRN3-210ENST00000492909 MMP1P03956 469 aa16.23■□□□□ 0.19
PDZRN3-210ENST00000492909 CHAMP1Q96JM3 812 aa16.23■□□□□ 0.19
PDZRN3-210ENST00000492909 AS3MTQ9HBK9 375 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms