RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 MSRB2Q9Y3D2 182 aa5.88□□□□□ -1.47
CLK1-213ENST00000492793 IGF2BP3O00425 579 aaKnown RBP eCLIP5.87□□□□□ -1.47
CLK1-213ENST00000492793 NOP56O00567 594 aaKnown RBP5.87□□□□□ -1.47
CLK1-213ENST00000492793 TNK2Q07912 1038 aa5.87□□□□□ -1.47
CLK1-213ENST00000492793 NBPF9Q3BBW0 867 aa5.87□□□□□ -1.47
CLK1-213ENST00000492793 NKAPLQ5M9Q1 402 aa5.87□□□□□ -1.47
CLK1-213ENST00000492793 SPATC1Q76KD6 591 aa5.87□□□□□ -1.47
CLK1-213ENST00000492793 LRP10Q7Z4F1 713 aa5.87□□□□□ -1.47
CLK1-213ENST00000492793 Q96M66 194 aa5.87□□□□□ -1.47
CLK1-213ENST00000492793 PRDM14Q9GZV8 571 aa5.87□□□□□ -1.47
CLK1-213ENST00000492793 SEMA6BQ9H3T3 888 aa5.87□□□□□ -1.47
CLK1-213ENST00000492793 NOL6Q9H6R4 1146 aaKnown RBP5.87□□□□□ -1.47
CLK1-213ENST00000492793 GP6Q9HCN6 339 aa5.87□□□□□ -1.47
CLK1-213ENST00000492793 KDM2BQ8NHM5 1336 aa5.87□□□□□ -1.47
CLK1-213ENST00000492793 IQCA1LA6NCM1 817 aa5.86□□□□□ -1.47
CLK1-213ENST00000492793 CBFA2T2O43439 604 aa5.86□□□□□ -1.47
CLK1-213ENST00000492793 ZNF143P52747 638 aaPredicted RBP5.86□□□□□ -1.47
CLK1-213ENST00000492793 NMIQ13287 307 aaPredicted RBP5.86□□□□□ -1.47
CLK1-213ENST00000492793 FAM214BQ7L5A3 538 aa5.86□□□□□ -1.47
CLK1-213ENST00000492793 TMC3Q7Z5M5 1100 aa5.86□□□□□ -1.47
CLK1-213ENST00000492793 ST13P5Q8NFI4 369 aaPredicted RBP5.86□□□□□ -1.47
CLK1-213ENST00000492793 VWCEQ96DN2 955 aa5.86□□□□□ -1.47
CLK1-213ENST00000492793 KLHL25Q9H0H3 589 aa5.86□□□□□ -1.47
CLK1-213ENST00000492793 PIM2Q9P1W9 311 aa5.86□□□□□ -1.47
CLK1-213ENST00000492793 WHRNQ9P202 907 aa5.86□□□□□ -1.47
CLK1-213ENST00000492793 AKT3Q9Y243 479 aa5.86□□□□□ -1.47
CLK1-213ENST00000492793 MRPL42Q9Y6G3 142 aaKnown RBP5.86□□□□□ -1.47
CLK1-213ENST00000492793 CAPN6Q9Y6Q1 641 aa5.86□□□□□ -1.47
CLK1-213ENST00000492793 SSU72P8A0A1W2PR75 194 aa5.85□□□□□ -1.47
CLK1-213ENST00000492793 H3BS24 57 aa5.85□□□□□ -1.47
CLK1-213ENST00000492793 DIAPH1O60610 1272 aaKnown RBP5.85□□□□□ -1.47
CLK1-213ENST00000492793 IGHA1P01876 353 aa5.85□□□□□ -1.47
CLK1-213ENST00000492793 CEACAM5P06731 702 aa5.85□□□□□ -1.47
CLK1-213ENST00000492793 OXCT1P55809 520 aa5.85□□□□□ -1.47
CLK1-213ENST00000492793 SLC10A6Q3KNW5 377 aa5.85□□□□□ -1.47
CLK1-213ENST00000492793 ANKRD39Q53RE8 183 aa5.85□□□□□ -1.47
CLK1-213ENST00000492793 LRRC47Q8N1G4 583 aaKnown RBP5.85□□□□□ -1.47
CLK1-213ENST00000492793 PLD6Q8N2A8 252 aaKnown RBP5.85□□□□□ -1.47
CLK1-213ENST00000492793 FIBCD1Q8N539 461 aa5.85□□□□□ -1.47
CLK1-213ENST00000492793 ZDHHC15Q96MV8 337 aa5.85□□□□□ -1.47
CLK1-213ENST00000492793 LGR4Q9BXB1 951 aa5.85□□□□□ -1.47
CLK1-213ENST00000492793 EPN3Q9H201 632 aa5.85□□□□□ -1.47
CLK1-213ENST00000492793 TRIT1Q9H3H1 467 aaKnown RBP5.85□□□□□ -1.47
CLK1-213ENST00000492793 CHST7Q9NS84 486 aa5.85□□□□□ -1.47
CLK1-213ENST00000492793 GPATCH2Q9NW75 528 aa5.85□□□□□ -1.47
CLK1-213ENST00000492793 ZSWIM5Q9P217 1185 aa5.85□□□□□ -1.47
CLK1-213ENST00000492793 APEX2Q9UBZ4 518 aa5.85□□□□□ -1.47
CLK1-213ENST00000492793 ZMYM5Q9UJ78 669 aa5.85□□□□□ -1.47
CLK1-213ENST00000492793 MINPP1Q9UNW1 487 aa5.85□□□□□ -1.47
CLK1-213ENST00000492793 COL17A1Q9UMD9 1497 aaPredicted RBP5.84□□□□□ -1.47
CLK1-213ENST00000492793 TLDC2A0PJX2 215 aa5.84□□□□□ -1.47
CLK1-213ENST00000492793 KCNH1O95259 989 aa5.84□□□□□ -1.47
CLK1-213ENST00000492793 PRAMEF1O95521 474 aa5.84□□□□□ -1.47
CLK1-213ENST00000492793 TGFB1P01137 390 aa5.84□□□□□ -1.47
CLK1-213ENST00000492793 ZNF865P0CJ78 1059 aaPredicted RBP5.84□□□□□ -1.47
CLK1-213ENST00000492793 ZNF445P59923 1031 aa5.84□□□□□ -1.47
CLK1-213ENST00000492793 CPSF6Q16630 551 aaKnown RBP eCLIP5.84□□□□□ -1.47
CLK1-213ENST00000492793 PRSS36Q5K4E3 855 aa5.84□□□□□ -1.47
CLK1-213ENST00000492793 CWF19L1Q69YN2 538 aaKnown RBP5.84□□□□□ -1.47
CLK1-213ENST00000492793 ZDHHC13Q8IUH4 622 aa5.84□□□□□ -1.47
CLK1-213ENST00000492793 CRACR2BQ8N4Y2 399 aaPredicted RBP5.84□□□□□ -1.47
CLK1-213ENST00000492793 BVESQ8NE79 360 aa5.84□□□□□ -1.47
CLK1-213ENST00000492793 PIWIL2Q8TC59 973 aaKnown RBP5.84□□□□□ -1.47
CLK1-213ENST00000492793 NETO1Q8TDF5 533 aa5.84□□□□□ -1.47
CLK1-213ENST00000492793 SH3TC2Q8TF17 1288 aa5.84□□□□□ -1.47
CLK1-213ENST00000492793 HSPA12BQ96MM6 686 aa5.84□□□□□ -1.47
CLK1-213ENST00000492793 IPO9Q96P70 1041 aaKnown RBP5.84□□□□□ -1.47
CLK1-213ENST00000492793 SF3B6Q9Y3B4 125 aaKnown RBP5.84□□□□□ -1.47
CLK1-213ENST00000492793 U3KQE9 123 aa5.84□□□□□ -1.47
CLK1-213ENST00000492793 SHISA3A0PJX4 238 aa5.83□□□□□ -1.48
CLK1-213ENST00000492793 SHOXO15266 292 aa5.83□□□□□ -1.48
CLK1-213ENST00000492793 SIGLEC6O43699 453 aa5.83□□□□□ -1.48
CLK1-213ENST00000492793 TPP2P29144 1249 aaPredicted RBP5.83□□□□□ -1.48
CLK1-213ENST00000492793 IFI16Q16666 785 aaKnown RBP5.83□□□□□ -1.48
CLK1-213ENST00000492793 DPY19L1Q2PZI1 675 aa5.83□□□□□ -1.48
CLK1-213ENST00000492793 POMZP3Q6PJE2 187 aa5.83□□□□□ -1.48
CLK1-213ENST00000492793 JAZF1Q86VZ6 243 aa5.83□□□□□ -1.48
CLK1-213ENST00000492793 LILRB2Q8N423 598 aa5.83□□□□□ -1.48
CLK1-213ENST00000492793 UBE2FQ969M7 185 aa5.83□□□□□ -1.48
CLK1-213ENST00000492793 CDC6Q99741 560 aa5.83□□□□□ -1.48
CLK1-213ENST00000492793 SPATA9Q9BWV2 254 aa5.83□□□□□ -1.48
CLK1-213ENST00000492793 ZC3H7BQ9UGR2 993 aaKnown RBP5.83□□□□□ -1.48
CLK1-213ENST00000492793 SUSD2Q9UGT4 822 aa5.83□□□□□ -1.48
CLK1-213ENST00000492793 TMEM265A0A087WTH1 108 aa5.82□□□□□ -1.48
CLK1-213ENST00000492793 VAMP4O75379 141 aa5.82□□□□□ -1.48
CLK1-213ENST00000492793 CLSTN1O94985 981 aa5.82□□□□□ -1.48
CLK1-213ENST00000492793 ITGAVP06756 1048 aa5.82□□□□□ -1.48
CLK1-213ENST00000492793 FOSL1P15407 271 aa5.82□□□□□ -1.48
CLK1-213ENST00000492793 LTKP29376 864 aa5.82□□□□□ -1.48
CLK1-213ENST00000492793 GRIK1P39086 918 aa5.82□□□□□ -1.48
CLK1-213ENST00000492793 KCNJ6P48051 423 aa5.82□□□□□ -1.48
CLK1-213ENST00000492793 HSP90AA2PQ14568 343 aaPredicted RBP5.82□□□□□ -1.48
CLK1-213ENST00000492793 NKPD1Q17RQ9 610 aa5.82□□□□□ -1.48
CLK1-213ENST00000492793 C22orf34Q6ZV56 151 aa5.82□□□□□ -1.48
CLK1-213ENST00000492793 SLC51AQ86UW1 340 aa5.82□□□□□ -1.48
CLK1-213ENST00000492793 SPACA3Q8IXA5 215 aa5.82□□□□□ -1.48
CLK1-213ENST00000492793 MKNK2Q9HBH9 465 aa5.82□□□□□ -1.48
CLK1-213ENST00000492793 CGGBP1Q9UFW8 167 aaPredicted RBP5.82□□□□□ -1.48
CLK1-213ENST00000492793 DIS3Q9Y2L1 958 aaKnown RBP5.82□□□□□ -1.48
CLK1-213ENST00000492793 FHOD1Q9Y613 1164 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms