RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 CCDC39Q9UFE4 941 aa7.54□□□□□ -1.2
HMGB1P38-201ENST00000490557 PITPNM2Q9BZ72 1349 aa7.53□□□□□ -1.2
HMGB1P38-201ENST00000490557 SSU72P8A0A1W2PR75 194 aa7.53□□□□□ -1.2
HMGB1P38-201ENST00000490557 HYAL3O43820 417 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P38-201ENST00000490557 TPP2P29144 1249 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P38-201ENST00000490557 BNIP3Q12983 259 aa7.53□□□□□ -1.2
HMGB1P38-201ENST00000490557 ANGEL2Q5VTE6 544 aaKnown RBP7.53□□□□□ -1.2
HMGB1P38-201ENST00000490557 C6orf15Q6UXA7 325 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P38-201ENST00000490557 ADAT2Q7Z6V5 191 aaKnown RBP7.53□□□□□ -1.2
HMGB1P38-201ENST00000490557 TP53INP2Q8IXH6 220 aa7.53□□□□□ -1.2
HMGB1P38-201ENST00000490557 FAM178BQ8IXR5 827 aa7.53□□□□□ -1.2
HMGB1P38-201ENST00000490557 ENOX1Q8TC92 643 aaKnown RBP7.53□□□□□ -1.2
HMGB1P38-201ENST00000490557 SYTL4Q96C24 671 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P38-201ENST00000490557 HAUS7Q99871 368 aa7.53□□□□□ -1.2
HMGB1P38-201ENST00000490557 ATP13A1Q9HD20 1204 aa7.53□□□□□ -1.2
HMGB1P38-201ENST00000490557 ST7Q9NRC1 585 aa7.53□□□□□ -1.2
HMGB1P38-201ENST00000490557 USP35Q9P2H5 1018 aa7.53□□□□□ -1.2
HMGB1P38-201ENST00000490557 MEIS1O00470 390 aa7.52□□□□□ -1.21
HMGB1P38-201ENST00000490557 SIGLEC6O43699 453 aa7.52□□□□□ -1.21
HMGB1P38-201ENST00000490557 ITGA4P13612 1032 aa7.52□□□□□ -1.21
HMGB1P38-201ENST00000490557 LTKP29376 864 aa7.52□□□□□ -1.21
HMGB1P38-201ENST00000490557 ARTNQ5T4W7 220 aa7.52□□□□□ -1.21
HMGB1P38-201ENST00000490557 TMPRSS7Q7RTY8 843 aa7.52□□□□□ -1.21
HMGB1P38-201ENST00000490557 TMC3Q7Z5M5 1100 aa7.52□□□□□ -1.21
HMGB1P38-201ENST00000490557 CREG2Q8IUH2 290 aa7.52□□□□□ -1.21
HMGB1P38-201ENST00000490557 PMFBP1Q8TBY8 1022 aa7.52□□□□□ -1.21
HMGB1P38-201ENST00000490557 UBXN4Q92575 508 aa7.52□□□□□ -1.21
HMGB1P38-201ENST00000490557 PPP1R14AQ96A00 147 aa7.52□□□□□ -1.21
HMGB1P38-201ENST00000490557 DUSP15Q9H1R2 295 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P38-201ENST00000490557 ZFP64Q9NPA5 681 aa7.52□□□□□ -1.21
HMGB1P38-201ENST00000490557 CHST7Q9NS84 486 aa7.52□□□□□ -1.21
HMGB1P38-201ENST00000490557 SEMA3GQ9NS98 782 aa7.52□□□□□ -1.21
HMGB1P38-201ENST00000490557 GFOD1Q9NXC2 390 aa7.52□□□□□ -1.21
HMGB1P38-201ENST00000490557 DUSP13Q9UII6 198 aa7.52□□□□□ -1.21
HMGB1P38-201ENST00000490557 PPM1BO75688 479 aa7.51□□□□□ -1.21
HMGB1P38-201ENST00000490557 PRAMEF1O95521 474 aa7.51□□□□□ -1.21
HMGB1P38-201ENST00000490557 SNW1Q13573 536 aaKnown RBP7.51□□□□□ -1.21
HMGB1P38-201ENST00000490557 RAB33AQ14088 237 aa7.51□□□□□ -1.21
HMGB1P38-201ENST00000490557 ANKRD39Q53RE8 183 aa7.51□□□□□ -1.21
HMGB1P38-201ENST00000490557 NBPF6Q5VWK0 638 aa7.51□□□□□ -1.21
HMGB1P38-201ENST00000490557 TSPYL5Q86VY4 417 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P38-201ENST00000490557 SYTL5Q8TDW5 730 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P38-201ENST00000490557 NBPF4Q96M43 638 aa7.51□□□□□ -1.21
HMGB1P38-201ENST00000490557 DNAJC2Q99543 621 aaKnown RBP7.51□□□□□ -1.21
HMGB1P38-201ENST00000490557 SUGT1Q9Y2Z0 365 aa7.51□□□□□ -1.21
HMGB1P38-201ENST00000490557 SHISA3A0PJX4 238 aa7.5□□□□□ -1.21
HMGB1P38-201ENST00000490557 ANKRD34BA5PLL1 514 aa7.5□□□□□ -1.21
HMGB1P38-201ENST00000490557 RBAK-RBAKDNI3L0D1 243 aa7.5□□□□□ -1.21
HMGB1P38-201ENST00000490557 KLF4O43474 513 aa7.5□□□□□ -1.21
HMGB1P38-201ENST00000490557 EPHX1P07099 455 aa7.5□□□□□ -1.21
HMGB1P38-201ENST00000490557 CD8BP10966 210 aa7.5□□□□□ -1.21
HMGB1P38-201ENST00000490557 CD247P20963 164 aa7.5□□□□□ -1.21
HMGB1P38-201ENST00000490557 CD96P40200 585 aa7.5□□□□□ -1.21
HMGB1P38-201ENST00000490557 ZP2Q05996 745 aa7.5□□□□□ -1.21
HMGB1P38-201ENST00000490557 DDR2Q16832 855 aa7.5□□□□□ -1.21
HMGB1P38-201ENST00000490557 CWF19L1Q69YN2 538 aaKnown RBP7.5□□□□□ -1.21
HMGB1P38-201ENST00000490557 ZNF574Q6ZN55 896 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P38-201ENST00000490557 NBPF11Q86T75 865 aa7.5□□□□□ -1.21
HMGB1P38-201ENST00000490557 ZNF655Q8N720 491 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P38-201ENST00000490557 AGBL5Q8NDL9 886 aa7.5□□□□□ -1.21
HMGB1P38-201ENST00000490557 KLHL6Q8WZ60 621 aa7.5□□□□□ -1.21
HMGB1P38-201ENST00000490557 APBA2Q99767 749 aa7.5□□□□□ -1.21
HMGB1P38-201ENST00000490557 GP6Q9HCN6 339 aa7.5□□□□□ -1.21
HMGB1P38-201ENST00000490557 PRR13Q9NZ81 148 aa7.5□□□□□ -1.21
HMGB1P38-201ENST00000490557 WHRNQ9P202 907 aa7.5□□□□□ -1.21
HMGB1P38-201ENST00000490557 ZNF451Q9Y4E5 1061 aa7.5□□□□□ -1.21
HMGB1P38-201ENST00000490557 B2RBV5 119 aa7.49□□□□□ -1.21
HMGB1P38-201ENST00000490557 GJB6O95452 261 aa7.49□□□□□ -1.21
HMGB1P38-201ENST00000490557 SRFP11831 508 aa7.49□□□□□ -1.21
HMGB1P38-201ENST00000490557 PCBP3P57721 371 aaKnown RBP7.49□□□□□ -1.21
HMGB1P38-201ENST00000490557 PLCL1Q15111 1095 aa7.49□□□□□ -1.21
HMGB1P38-201ENST00000490557 EEPD1Q7L9B9 569 aa7.49□□□□□ -1.21
HMGB1P38-201ENST00000490557 CELF2-AS1Q8N7Q2 184 aa7.49□□□□□ -1.21
HMGB1P38-201ENST00000490557 DAGLBQ8NCG7 672 aa7.49□□□□□ -1.21
HMGB1P38-201ENST00000490557 BRF1Q92994 677 aa7.49□□□□□ -1.21
HMGB1P38-201ENST00000490557 FGD4Q96M96 766 aa7.49□□□□□ -1.21
HMGB1P38-201ENST00000490557 CARS2Q9HA77 564 aaKnown RBP7.49□□□□□ -1.21
HMGB1P38-201ENST00000490557 SF3B6Q9Y3B4 125 aaKnown RBP7.49□□□□□ -1.21
HMGB1P38-201ENST00000490557 CCDC85CA6NKD9 419 aa7.48□□□□□ -1.21
HMGB1P38-201ENST00000490557 WASH4PA8MWX3 477 aa7.48□□□□□ -1.21
HMGB1P38-201ENST00000490557 CBFA2T2O43439 604 aa7.48□□□□□ -1.21
HMGB1P38-201ENST00000490557 ZNF143P52747 638 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P38-201ENST00000490557 EGR3Q06889 387 aa7.48□□□□□ -1.21
HMGB1P38-201ENST00000490557 RBL2Q08999 1139 aa7.48□□□□□ -1.21
HMGB1P38-201ENST00000490557 SPRED2Q7Z698 418 aa7.48□□□□□ -1.21
HMGB1P38-201ENST00000490557 FIBCD1Q8N539 461 aa7.48□□□□□ -1.21
HMGB1P38-201ENST00000490557 ADCY4Q8NFM4 1077 aa7.48□□□□□ -1.21
HMGB1P38-201ENST00000490557 TCTN2Q96GX1 697 aa7.48□□□□□ -1.21
HMGB1P38-201ENST00000490557 HDAC8Q9BY41 377 aa7.48□□□□□ -1.21
HMGB1P38-201ENST00000490557 KLHL25Q9H0H3 589 aa7.48□□□□□ -1.21
HMGB1P38-201ENST00000490557 NOL6Q9H6R4 1146 aaKnown RBP7.48□□□□□ -1.21
HMGB1P38-201ENST00000490557 LMCD1Q9NZU5 365 aa7.48□□□□□ -1.21
HMGB1P38-201ENST00000490557 SIRPGQ9P1W8 387 aa7.48□□□□□ -1.21
HMGB1P38-201ENST00000490557 LRP2BPQ9P2M1 347 aa7.48□□□□□ -1.21
HMGB1P38-201ENST00000490557 FHOD1Q9Y613 1164 aa7.48□□□□□ -1.21
HMGB1P38-201ENST00000490557 AGRPO00253 132 aa7.47□□□□□ -1.21
HMGB1P38-201ENST00000490557 SHOXO15266 292 aa7.47□□□□□ -1.21
HMGB1P38-201ENST00000490557 ZNF445P59923 1031 aa7.47□□□□□ -1.21
HMGB1P38-201ENST00000490557 PPP2R5DQ14738 602 aa7.47□□□□□ -1.21
HMGB1P38-201ENST00000490557 SV2CQ496J9 727 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms