RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 FRMPD3Q5JV73 1810 aa12.34□□□□□ -0.43
RBM39-236ENST00000490484 PLIN4Q96Q06 1357 aa12.33□□□□□ -0.44
RBM39-236ENST00000490484 IGKV6D-41A0A0C4DH26 115 aa12.33□□□□□ -0.44
RBM39-236ENST00000490484 A0A0D9SFI3 127 aa12.33□□□□□ -0.44
RBM39-236ENST00000490484 NDUFB10O96000 172 aa12.33□□□□□ -0.44
RBM39-236ENST00000490484 SLC3A2P08195 630 aaKnown RBP12.33□□□□□ -0.44
RBM39-236ENST00000490484 TSPY3P0CV98 308 aa12.33□□□□□ -0.44
RBM39-236ENST00000490484 TSPY8P0CW00 308 aa12.33□□□□□ -0.44
RBM39-236ENST00000490484 ADORA2AP29274 412 aa12.33□□□□□ -0.44
RBM39-236ENST00000490484 PDE4BQ07343 736 aa12.33□□□□□ -0.44
RBM39-236ENST00000490484 TMEM132BQ14DG7 1078 aa12.33□□□□□ -0.44
RBM39-236ENST00000490484 VPS53Q5VIR6 699 aa12.33□□□□□ -0.44
RBM39-236ENST00000490484 MFSD14CQ5VZR4 134 aa12.33□□□□□ -0.44
RBM39-236ENST00000490484 LRRC47Q8N1G4 583 aaKnown RBP12.33□□□□□ -0.44
RBM39-236ENST00000490484 SHCBP1Q8NEM2 672 aa12.33□□□□□ -0.44
RBM39-236ENST00000490484 NPLOC4Q8TAT6 608 aa12.33□□□□□ -0.44
RBM39-236ENST00000490484 PAWRQ96IZ0 340 aaKnown RBP12.33□□□□□ -0.44
RBM39-236ENST00000490484 FAM227BQ96M60 508 aa12.33□□□□□ -0.44
RBM39-236ENST00000490484 NYAP2Q9P242 653 aa12.33□□□□□ -0.44
RBM39-236ENST00000490484 PPP1R9AQ9ULJ8 1098 aa12.33□□□□□ -0.44
RBM39-236ENST00000490484 TRIM6-TRIM34B2RNG4 842 aa12.32□□□□□ -0.44
RBM39-236ENST00000490484 F5H6K3 240 aa12.32□□□□□ -0.44
RBM39-236ENST00000490484 IGHDP01880 384 aa12.32□□□□□ -0.44
RBM39-236ENST00000490484 HOXC6P09630 235 aa12.32□□□□□ -0.44
RBM39-236ENST00000490484 CYP2C19P33261 490 aa12.32□□□□□ -0.44
RBM39-236ENST00000490484 KLRC3Q07444 240 aa12.32□□□□□ -0.44
RBM39-236ENST00000490484 FAM47AQ5JRC9 791 aa12.32□□□□□ -0.44
RBM39-236ENST00000490484 NECAB2Q7Z6G3 386 aa12.32□□□□□ -0.44
RBM39-236ENST00000490484 DPP9Q86TI2 863 aa12.32□□□□□ -0.44
RBM39-236ENST00000490484 CHD1LQ86WJ1 897 aa12.32□□□□□ -0.44
RBM39-236ENST00000490484 ANKLE1Q8NAG6 615 aa12.32□□□□□ -0.44
RBM39-236ENST00000490484 SLF1Q9BQI6 1058 aa12.32□□□□□ -0.44
RBM39-236ENST00000490484 MROH8Q9H579 483 aa12.32□□□□□ -0.44
RBM39-236ENST00000490484 CLIP2Q9UDT6 1046 aa12.32□□□□□ -0.44
RBM39-236ENST00000490484 ALPK3Q96L96 1907 aa12.32□□□□□ -0.44
RBM39-236ENST00000490484 VWA5AO00534 786 aa12.31□□□□□ -0.44
RBM39-236ENST00000490484 EVI5O60447 810 aa12.31□□□□□ -0.44
RBM39-236ENST00000490484 TTLL1O95922 423 aa12.31□□□□□ -0.44
RBM39-236ENST00000490484 CAPN2P17655 700 aa12.31□□□□□ -0.44
RBM39-236ENST00000490484 MNX1P50219 401 aaPredicted RBP12.31□□□□□ -0.44
RBM39-236ENST00000490484 TFAP4Q01664 338 aa12.31□□□□□ -0.44
RBM39-236ENST00000490484 NUCB1Q02818 461 aa12.31□□□□□ -0.44
RBM39-236ENST00000490484 CTDSPL2Q05D32 466 aa12.31□□□□□ -0.44
RBM39-236ENST00000490484 RILPL2Q969X0 211 aa12.31□□□□□ -0.44
RBM39-236ENST00000490484 HELLSQ9NRZ9 838 aa12.31□□□□□ -0.44
RBM39-236ENST00000490484 MTMR4Q9NYA4 1195 aa12.31□□□□□ -0.44
RBM39-236ENST00000490484 OGDHLQ9ULD0 1010 aa12.31□□□□□ -0.44
RBM39-236ENST00000490484 ADAMTS5Q9UNA0 930 aa12.31□□□□□ -0.44
RBM39-236ENST00000490484 SUPT16HQ9Y5B9 1047 aaKnown RBP12.31□□□□□ -0.44
RBM39-236ENST00000490484 STRNO43815 780 aa12.3□□□□□ -0.44
RBM39-236ENST00000490484 COBLO75128 1261 aa12.3□□□□□ -0.44
RBM39-236ENST00000490484 CNGA1P29973 690 aa12.3□□□□□ -0.44
RBM39-236ENST00000490484 NMIQ13287 307 aaPredicted RBP12.3□□□□□ -0.44
RBM39-236ENST00000490484 MCMDC2Q4G0Z9 681 aa12.3□□□□□ -0.44
RBM39-236ENST00000490484 HABP4Q5JVS0 413 aaKnown RBP12.3□□□□□ -0.44
RBM39-236ENST00000490484 CHRDL2Q6WN34 429 aa12.3□□□□□ -0.44
RBM39-236ENST00000490484 ZNF589Q86UQ0 364 aaPredicted RBP12.3□□□□□ -0.44
RBM39-236ENST00000490484 REPS2Q8NFH8 660 aa12.3□□□□□ -0.44
RBM39-236ENST00000490484 NEDD1Q8NHV4 660 aa12.3□□□□□ -0.44
RBM39-236ENST00000490484 MMP19Q99542 508 aa12.3□□□□□ -0.44
RBM39-236ENST00000490484 NBPF3Q9H094 633 aa12.3□□□□□ -0.44
RBM39-236ENST00000490484 C11orf49Q9H6J7 331 aa12.3□□□□□ -0.44
RBM39-236ENST00000490484 ZNF214Q9UL59 606 aaPredicted RBP12.3□□□□□ -0.44
RBM39-236ENST00000490484 ISY1Q9ULR0 285 aaKnown RBP12.3□□□□□ -0.44
RBM39-236ENST00000490484 COLQQ9Y215 455 aaPredicted RBP12.3□□□□□ -0.44
RBM39-236ENST00000490484 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.3□□□□□ -0.44
RBM39-236ENST00000490484 NR2E3Q9Y5X4 410 aa12.3□□□□□ -0.44
RBM39-236ENST00000490484 TSPY2A6NKD2 308 aa12.29□□□□□ -0.44
RBM39-236ENST00000490484 SLC25A27O95847 323 aa12.29□□□□□ -0.44
RBM39-236ENST00000490484 FCER1AP12319 257 aa12.29□□□□□ -0.44
RBM39-236ENST00000490484 CYBAP13498 195 aa12.29□□□□□ -0.44
RBM39-236ENST00000490484 STAT3P40763 770 aa12.29□□□□□ -0.44
RBM39-236ENST00000490484 IRX6P78412 446 aaPredicted RBP12.29□□□□□ -0.44
RBM39-236ENST00000490484 OLFML2BQ68BL8 750 aa12.29□□□□□ -0.44
RBM39-236ENST00000490484 LHX8Q68G74 356 aa12.29□□□□□ -0.44
RBM39-236ENST00000490484 SNRNP48Q6IEG0 339 aaKnown RBP12.29□□□□□ -0.44
RBM39-236ENST00000490484 RIOX2Q8IUF8 465 aa12.29□□□□□ -0.44
RBM39-236ENST00000490484 PLEKHM2Q8IWE5 1019 aa12.29□□□□□ -0.44
RBM39-236ENST00000490484 ABRAQ8N0Z2 381 aa12.29□□□□□ -0.44
RBM39-236ENST00000490484 GMCL1P1Q8NEA9 526 aa12.29□□□□□ -0.44
RBM39-236ENST00000490484 TRPV1Q8NER1 839 aa12.29□□□□□ -0.44
RBM39-236ENST00000490484 KIFC2Q96AC6 838 aa12.29□□□□□ -0.44
RBM39-236ENST00000490484 CHMP4CQ96CF2 233 aa12.29□□□□□ -0.44
RBM39-236ENST00000490484 INCENPQ9NQS7 918 aa12.29□□□□□ -0.44
RBM39-236ENST00000490484 SLC5A4Q9NY91 659 aa12.29□□□□□ -0.44
RBM39-236ENST00000490484 DDX20Q9UHI6 824 aaKnown RBP12.29□□□□□ -0.44
RBM39-236ENST00000490484 SYNPO2Q9UMS6 1093 aa12.29□□□□□ -0.44
RBM39-236ENST00000490484 STX8Q9UNK0 236 aa12.29□□□□□ -0.44
RBM39-236ENST00000490484 TRIOBPQ9H2D6 2365 aa12.29□□□□□ -0.44
RBM39-236ENST00000490484 CCDC171Q6TFL3 1326 aa12.29□□□□□ -0.44
RBM39-236ENST00000490484 LAMA3Q16787 3333 aa12.28□□□□□ -0.44
RBM39-236ENST00000490484 DNAH12Q6ZR08 3092 aa12.28□□□□□ -0.44
RBM39-236ENST00000490484 RANBP6O60518 1105 aaKnown RBP12.28□□□□□ -0.44
RBM39-236ENST00000490484 NMT2O60551 498 aa12.28□□□□□ -0.44
RBM39-236ENST00000490484 PGK2P07205 417 aa12.28□□□□□ -0.44
RBM39-236ENST00000490484 SLC4A3P48751 1232 aa12.28□□□□□ -0.44
RBM39-236ENST00000490484 KCTD2Q14681 263 aa12.28□□□□□ -0.44
RBM39-236ENST00000490484 SLFN13Q68D06 897 aa12.28□□□□□ -0.44
RBM39-236ENST00000490484 RASGRP2Q7LDG7 609 aa12.28□□□□□ -0.44
RBM39-236ENST00000490484 C7orf61Q8IZ16 206 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 241.7 ms