RNA–Protein interactions for RNA: ENST00000489266.5

NSMCE4A-211, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best)

Gene NSMCE4A, Length 2,399 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-211ENST00000489266 XRCC4Q13426 336 aa23.78■■□□□ 1.4
NSMCE4A-211ENST00000489266 USHBP1Q8N6Y0 703 aa23.78■■□□□ 1.4
NSMCE4A-211ENST00000489266 LMBR1Q8WVP7 490 aa23.78■■□□□ 1.4
NSMCE4A-211ENST00000489266 ARHGAP23Q9P227 1491 aa23.78■■□□□ 1.4
NSMCE4A-211ENST00000489266 ANTXR2P58335 489 aa23.78■■□□□ 1.4
NSMCE4A-211ENST00000489266 GRIN1Q05586 938 aa23.78■■□□□ 1.4
NSMCE4A-211ENST00000489266 IMMTQ16891 758 aaKnown RBP23.78■■□□□ 1.4
NSMCE4A-211ENST00000489266 ZNF572Q7Z3I7 529 aaPredicted RBP23.78■■□□□ 1.4
NSMCE4A-211ENST00000489266 DDX21Q9NR30 783 aaKnown RBP eCLIP23.78■■□□□ 1.4
NSMCE4A-211ENST00000489266 TBX22Q9Y458 520 aa23.78■■□□□ 1.4
NSMCE4A-211ENST00000489266 ANKRD18BA2A2Z9 1011 aa23.77■■□□□ 1.4
NSMCE4A-211ENST00000489266 E7EVH7 732 aa23.77■■□□□ 1.4
NSMCE4A-211ENST00000489266 N4BP3O15049 544 aa23.77■■□□□ 1.4
NSMCE4A-211ENST00000489266 CDKL5O76039 1030 aa23.77■■□□□ 1.4
NSMCE4A-211ENST00000489266 NBPF9Q3BBW0 867 aa23.77■■□□□ 1.4
NSMCE4A-211ENST00000489266 ACCSLQ4AC99 568 aa23.77■■□□□ 1.4
NSMCE4A-211ENST00000489266 KIAA1328Q86T90 577 aa23.77■■□□□ 1.4
NSMCE4A-211ENST00000489266 ITFG2Q969R8 447 aa23.77■■□□□ 1.4
NSMCE4A-211ENST00000489266 MYO5AQ9Y4I1 1855 aaKnown RBP23.77■■□□□ 1.4
NSMCE4A-211ENST00000489266 PTPREP23469 700 aa23.77■■□□□ 1.4
NSMCE4A-211ENST00000489266 TNFRSF8P28908 595 aa23.77■■□□□ 1.4
NSMCE4A-211ENST00000489266 KRT31Q15323 416 aa23.77■■□□□ 1.4
NSMCE4A-211ENST00000489266 IQCKQ8N0W5 287 aa23.77■■□□□ 1.4
NSMCE4A-211ENST00000489266 LIMA1Q9UHB6 759 aaKnown RBP23.77■■□□□ 1.4
NSMCE4A-211ENST00000489266 PIK3C2AO00443 1686 aa23.76■■□□□ 1.39
NSMCE4A-211ENST00000489266 ZNF233A6NK53 670 aa23.76■■□□□ 1.39
NSMCE4A-211ENST00000489266 NEXNQ0ZGT2 675 aa23.76■■□□□ 1.39
NSMCE4A-211ENST00000489266 AIMP1Q12904 312 aaKnown RBP23.76■■□□□ 1.39
NSMCE4A-211ENST00000489266 RIC3Q7Z5B4 369 aa23.76■■□□□ 1.39
NSMCE4A-211ENST00000489266 NCOA7Q8NI08 942 aa23.76■■□□□ 1.39
NSMCE4A-211ENST00000489266 SAAL1Q96ER3 474 aa23.76■■□□□ 1.39
NSMCE4A-211ENST00000489266 FBXO2Q9UK22 296 aaPredicted RBP23.76■■□□□ 1.39
NSMCE4A-211ENST00000489266 MST1RQ04912 1400 aa23.76■■□□□ 1.39
NSMCE4A-211ENST00000489266 LRRC10BA6NIK2 292 aa23.76■■□□□ 1.39
NSMCE4A-211ENST00000489266 OPLAHO14841 1288 aa23.76■■□□□ 1.39
NSMCE4A-211ENST00000489266 KRT86O43790 486 aa23.76■■□□□ 1.39
NSMCE4A-211ENST00000489266 NLRP6P59044 892 aa23.76■■□□□ 1.39
NSMCE4A-211ENST00000489266 TAX1BP1Q86VP1 789 aa23.76■■□□□ 1.39
NSMCE4A-211ENST00000489266 CREG2Q8IUH2 290 aa23.76■■□□□ 1.39
NSMCE4A-211ENST00000489266 C3orf20Q8ND61 904 aa23.76■■□□□ 1.39
NSMCE4A-211ENST00000489266 JADE2Q9NQC1 790 aa23.76■■□□□ 1.39
NSMCE4A-211ENST00000489266 SETD1BQ9UPS6 1966 aaKnown RBP23.75■■□□□ 1.39
NSMCE4A-211ENST00000489266 M0R2C6 588 aa23.75■■□□□ 1.39
NSMCE4A-211ENST00000489266 IDEP14735 1019 aa23.75■■□□□ 1.39
NSMCE4A-211ENST00000489266 SCTRP47872 440 aa23.75■■□□□ 1.39
NSMCE4A-211ENST00000489266 FNBP4Q8N3X1 1017 aaPredicted RBP23.75■■□□□ 1.39
NSMCE4A-211ENST00000489266 ZNF579Q8NAF0 562 aaKnown RBP23.75■■□□□ 1.39
NSMCE4A-211ENST00000489266 PARD3BQ8TEW8 1205 aa23.75■■□□□ 1.39
NSMCE4A-211ENST00000489266 HOMER3Q9NSC5 361 aa23.75■■□□□ 1.39
NSMCE4A-211ENST00000489266 CPDO75976 1380 aa23.75■■□□□ 1.39
NSMCE4A-211ENST00000489266 ECM29Q5VYK3 1845 aa23.74■■□□□ 1.39
NSMCE4A-211ENST00000489266 SNUPNO95149 360 aaKnown RBP23.74■■□□□ 1.39
NSMCE4A-211ENST00000489266 SLC7A5Q01650 507 aa23.74■■□□□ 1.39
NSMCE4A-211ENST00000489266 RABL6Q3YEC7 729 aaPredicted RBP23.74■■□□□ 1.39
NSMCE4A-211ENST00000489266 LACTB2Q53H82 288 aaPredicted RBP23.74■■□□□ 1.39
NSMCE4A-211ENST00000489266 AKAP4Q5JQC9 854 aa23.74■■□□□ 1.39
NSMCE4A-211ENST00000489266 PPP4R3AQ6IN85 833 aa23.74■■□□□ 1.39
NSMCE4A-211ENST00000489266 PLPPR3Q6T4P5 718 aa23.74■■□□□ 1.39
NSMCE4A-211ENST00000489266 CD302Q8IX05 232 aa23.74■■□□□ 1.39
NSMCE4A-211ENST00000489266 C1orf131Q8NDD1 294 aaKnown RBP23.74■■□□□ 1.39
NSMCE4A-211ENST00000489266 EBF2Q9HAK2 575 aa23.74■■□□□ 1.39
NSMCE4A-211ENST00000489266 STIM2Q9P246 746 aa23.74■■□□□ 1.39
NSMCE4A-211ENST00000489266 AMOTL2Q9Y2J4 779 aa23.74■■□□□ 1.39
NSMCE4A-211ENST00000489266 SH2B2O14492 632 aaPredicted RBP23.74■■□□□ 1.39
NSMCE4A-211ENST00000489266 PEX19P40855 299 aa23.74■■□□□ 1.39
NSMCE4A-211ENST00000489266 RBBP5Q15291 538 aaKnown RBP23.74■■□□□ 1.39
NSMCE4A-211ENST00000489266 CFAP58Q5T655 872 aa23.74■■□□□ 1.39
NSMCE4A-211ENST00000489266 RIPOR2Q9Y4F9 1068 aa23.74■■□□□ 1.39
NSMCE4A-211ENST00000489266 HAND2P61296 217 aa23.73■■□□□ 1.39
NSMCE4A-211ENST00000489266 KRT83P78385 493 aa23.73■■□□□ 1.39
NSMCE4A-211ENST00000489266 KCNB1Q14721 858 aa23.73■■□□□ 1.39
NSMCE4A-211ENST00000489266 OR8K1Q8NGG5 319 aa23.73■■□□□ 1.39
NSMCE4A-211ENST00000489266 CNKSR2Q8WXI2 1034 aa23.73■■□□□ 1.39
NSMCE4A-211ENST00000489266 PRAMEF22A3QJZ6 481 aa23.73■■□□□ 1.39
NSMCE4A-211ENST00000489266 ATP6V1G2O95670 118 aa23.73■■□□□ 1.39
NSMCE4A-211ENST00000489266 COPB1P53618 953 aaKnown RBP23.73■■□□□ 1.39
NSMCE4A-211ENST00000489266 TRIM29Q14134 588 aa23.73■■□□□ 1.39
NSMCE4A-211ENST00000489266 NGDNQ8NEJ9 315 aaKnown RBP23.73■■□□□ 1.39
NSMCE4A-211ENST00000489266 SPATA4Q8NEY3 305 aa23.73■■□□□ 1.39
NSMCE4A-211ENST00000489266 NSMCE1Q8WV22 266 aa23.73■■□□□ 1.39
NSMCE4A-211ENST00000489266 CCDC43Q96MW1 224 aaKnown RBP23.73■■□□□ 1.39
NSMCE4A-211ENST00000489266 VPS16Q9H269 839 aa23.73■■□□□ 1.39
NSMCE4A-211ENST00000489266 NOD2Q9HC29 1040 aa23.73■■□□□ 1.39
NSMCE4A-211ENST00000489266 SLC39A2Q9NP94 309 aa23.73■■□□□ 1.39
NSMCE4A-211ENST00000489266 NWD2Q9ULI1 1742 aa23.73■■□□□ 1.39
NSMCE4A-211ENST00000489266 PPP1R3GB7ZBB8 358 aa23.72■■□□□ 1.39
NSMCE4A-211ENST00000489266 MPHOSPH10O00566 681 aaKnown RBP23.72■■□□□ 1.39
NSMCE4A-211ENST00000489266 AP1G2O75843 785 aa23.72■■□□□ 1.39
NSMCE4A-211ENST00000489266 CLSTN1O94985 981 aa23.72■■□□□ 1.39
NSMCE4A-211ENST00000489266 ITGB3BPQ13352 177 aaPredicted RBP23.72■■□□□ 1.39
NSMCE4A-211ENST00000489266 PDIA6Q15084 440 aa23.72■■□□□ 1.39
NSMCE4A-211ENST00000489266 GLE1Q53GS7 698 aaKnown RBP23.72■■□□□ 1.39
NSMCE4A-211ENST00000489266 RALYLQ86SE5 291 aaKnown RBP23.72■■□□□ 1.39
NSMCE4A-211ENST00000489266 THEMISQ8N1K5 641 aaPredicted RBP23.72■■□□□ 1.39
NSMCE4A-211ENST00000489266 ATP6V1G3Q96LB4 118 aa23.72■■□□□ 1.39
NSMCE4A-211ENST00000489266 DNAJC8O75937 253 aaPredicted RBP23.72■■□□□ 1.39
NSMCE4A-211ENST00000489266 MRPS25P82663 173 aaKnown RBP23.72■■□□□ 1.39
NSMCE4A-211ENST00000489266 HAUS3Q68CZ6 603 aa23.72■■□□□ 1.39
NSMCE4A-211ENST00000489266 BZW1Q7L1Q6 419 aaKnown RBP23.72■■□□□ 1.39
NSMCE4A-211ENST00000489266 LACRTQ9GZZ8 138 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms