RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 IGDCC4Q8TDY8 1250 aa18.71■□□□□ 0.59
HDAC7-224ENST00000488927 TM6SF1Q9BZW5 370 aa18.71■□□□□ 0.59
HDAC7-224ENST00000488927 FLOT1O75955 427 aa18.7■□□□□ 0.58
HDAC7-224ENST00000488927 LIFRP42702 1097 aa18.7■□□□□ 0.58
HDAC7-224ENST00000488927 HERVK_113P62684 666 aa18.7■□□□□ 0.58
HDAC7-224ENST00000488927 LBX2Q6XYB7 198 aa18.7■□□□□ 0.58
HDAC7-224ENST00000488927 FEM1BQ9UK73 627 aa18.7■□□□□ 0.58
HDAC7-224ENST00000488927 MYH4Q9Y623 1939 aa18.7■□□□□ 0.58
HDAC7-224ENST00000488927 SH2B2O14492 632 aaPredicted RBP18.69■□□□□ 0.58
HDAC7-224ENST00000488927 FOXN1O15353 648 aa18.69■□□□□ 0.58
HDAC7-224ENST00000488927 PLA2G6O60733 806 aa18.69■□□□□ 0.58
HDAC7-224ENST00000488927 CASTP20810 708 aaKnown RBP18.69■□□□□ 0.58
HDAC7-224ENST00000488927 EXOSC10Q01780 885 aaKnown RBP18.69■□□□□ 0.58
HDAC7-224ENST00000488927 GPATCH4Q5T3I0 446 aaKnown RBP18.69■□□□□ 0.58
HDAC7-224ENST00000488927 CATIPQ7Z7H3 387 aa18.69■□□□□ 0.58
HDAC7-224ENST00000488927 FAM160B2Q86V87 743 aa18.69■□□□□ 0.58
HDAC7-224ENST00000488927 MB21D1Q8N884 522 aa18.69■□□□□ 0.58
HDAC7-224ENST00000488927 CHURC1Q8WUH1 139 aa18.69■□□□□ 0.58
HDAC7-224ENST00000488927 IL17RAQ96F46 866 aa18.69■□□□□ 0.58
HDAC7-224ENST00000488927 P2RX7Q99572 595 aaKnown RBP18.69■□□□□ 0.58
HDAC7-224ENST00000488927 LY9Q9HBG7 655 aa18.69■□□□□ 0.58
HDAC7-224ENST00000488927 ADGRA2Q96PE1 1338 aa18.69■□□□□ 0.58
HDAC7-224ENST00000488927 CCDC69A6NI79 296 aa18.68■□□□□ 0.58
HDAC7-224ENST00000488927 GPR25O00155 361 aa18.68■□□□□ 0.58
HDAC7-224ENST00000488927 SNHG28P0DPA3 235 aa18.68■□□□□ 0.58
HDAC7-224ENST00000488927 PDHBP11177 359 aa18.68■□□□□ 0.58
HDAC7-224ENST00000488927 RPS6KB1P23443 525 aa18.68■□□□□ 0.58
HDAC7-224ENST00000488927 DSG3P32926 999 aa18.68■□□□□ 0.58
HDAC7-224ENST00000488927 STAT2P52630 851 aa18.68■□□□□ 0.58
HDAC7-224ENST00000488927 FGD1P98174 961 aa18.68■□□□□ 0.58
HDAC7-224ENST00000488927 CCDC96Q2M329 555 aa18.68■□□□□ 0.58
HDAC7-224ENST00000488927 C17orf99Q6UX52 265 aa18.68■□□□□ 0.58
HDAC7-224ENST00000488927 NFXL1Q6ZNB6 911 aa18.68■□□□□ 0.58
HDAC7-224ENST00000488927 PRPF38AQ8NAV1 312 aaKnown RBP18.68■□□□□ 0.58
HDAC7-224ENST00000488927 NUP88Q99567 741 aaPredicted RBP18.68■□□□□ 0.58
HDAC7-224ENST00000488927 SLF1Q9BQI6 1058 aa18.68■□□□□ 0.58
HDAC7-224ENST00000488927 ZSWIM6Q9HCJ5 1215 aa18.68■□□□□ 0.58
HDAC7-224ENST00000488927 ISY1Q9ULR0 285 aaKnown RBP18.68■□□□□ 0.58
HDAC7-224ENST00000488927 CYP46A1Q9Y6A2 500 aa18.68■□□□□ 0.58
HDAC7-224ENST00000488927 SPDYE16A6NNV3 312 aaPredicted RBP18.67■□□□□ 0.58
HDAC7-224ENST00000488927 TMEM232C9JQI7 657 aa18.67■□□□□ 0.58
HDAC7-224ENST00000488927 FDX1P10109 184 aa18.67■□□□□ 0.58
HDAC7-224ENST00000488927 HSPA8P11142 646 aaKnown RBP18.67■□□□□ 0.58
HDAC7-224ENST00000488927 FAM110CQ1W6H9 321 aa18.67■□□□□ 0.58
HDAC7-224ENST00000488927 ASPRV1Q53RT3 343 aa18.67■□□□□ 0.58
HDAC7-224ENST00000488927 RUFY3Q7L099 469 aa18.67■□□□□ 0.58
HDAC7-224ENST00000488927 SGMS1Q86VZ5 419 aa18.67■□□□□ 0.58
HDAC7-224ENST00000488927 FBXL16Q8N461 479 aa18.67■□□□□ 0.58
HDAC7-224ENST00000488927 PPP1R9AQ9ULJ8 1098 aa18.67■□□□□ 0.58
HDAC7-224ENST00000488927 MTMR7Q9Y216 660 aa18.67■□□□□ 0.58
HDAC7-224ENST00000488927 RABGAP1Q9Y3P9 1069 aa18.67■□□□□ 0.58
HDAC7-224ENST00000488927 FKTNO75072 461 aa18.66■□□□□ 0.58
HDAC7-224ENST00000488927 DDAH1O94760 285 aa18.66■□□□□ 0.58
HDAC7-224ENST00000488927 CALM1P0DP23 149 aa18.66■□□□□ 0.58
HDAC7-224ENST00000488927 CALM2P0DP24 149 aa18.66■□□□□ 0.58
HDAC7-224ENST00000488927 CALM3P0DP25 149 aa18.66■□□□□ 0.58
HDAC7-224ENST00000488927 BCRP11274 1271 aa18.66■□□□□ 0.58
HDAC7-224ENST00000488927 SP3Q02447 781 aa18.66■□□□□ 0.58
HDAC7-224ENST00000488927 ZNF543Q08ER8 600 aa18.66■□□□□ 0.58
HDAC7-224ENST00000488927 IKQ13123 557 aaPredicted RBP18.66■□□□□ 0.58
HDAC7-224ENST00000488927 SYNE3Q6ZMZ3 975 aa18.66■□□□□ 0.58
HDAC7-224ENST00000488927 MAP3K14Q99558 947 aa18.66■□□□□ 0.58
HDAC7-224ENST00000488927 R3HDMLQ9H3Y0 253 aa18.66■□□□□ 0.58
HDAC7-224ENST00000488927 MORF4L1Q9UBU8 362 aa18.66■□□□□ 0.58
HDAC7-224ENST00000488927 CPA4Q9UI42 421 aa18.66■□□□□ 0.58
HDAC7-224ENST00000488927 TSKSQ9UJT2 592 aa18.66■□□□□ 0.58
HDAC7-224ENST00000488927 PARP1P09874 1014 aaKnown RBP18.65■□□□□ 0.58
HDAC7-224ENST00000488927 KIF22Q14807 665 aa18.65■□□□□ 0.58
HDAC7-224ENST00000488927 ARHGEF6Q15052 776 aa18.65■□□□□ 0.58
HDAC7-224ENST00000488927 KCTD1Q719H9 257 aa18.65■□□□□ 0.58
HDAC7-224ENST00000488927 ANKRD13CQ8N6S4 541 aa18.65■□□□□ 0.58
HDAC7-224ENST00000488927 GPRC5AQ8NFJ5 357 aa18.65■□□□□ 0.58
HDAC7-224ENST00000488927 LRRC2Q9BYS8 371 aa18.65■□□□□ 0.58
HDAC7-224ENST00000488927 BACH2Q9BYV9 841 aa18.65■□□□□ 0.58
HDAC7-224ENST00000488927 C22orf23Q9BZE7 217 aa18.65■□□□□ 0.58
HDAC7-224ENST00000488927 ADAMTS5Q9UNA0 930 aa18.65■□□□□ 0.58
HDAC7-224ENST00000488927 SLC12A7Q9Y666 1083 aa18.65■□□□□ 0.58
HDAC7-224ENST00000488927 RBM25P49756 843 aaKnown RBP18.64■□□□□ 0.57
HDAC7-224ENST00000488927 CCNA1P78396 465 aa18.64■□□□□ 0.57
HDAC7-224ENST00000488927 TROAPQ12815 778 aa18.64■□□□□ 0.57
HDAC7-224ENST00000488927 COL9A3Q14050 684 aaPredicted RBP18.64■□□□□ 0.57
HDAC7-224ENST00000488927 BTNL9Q6UXG8 535 aa18.64■□□□□ 0.57
HDAC7-224ENST00000488927 ZNF654Q8IZM8 581 aa18.64■□□□□ 0.57
HDAC7-224ENST00000488927 ZNF296Q8WUU4 475 aaPredicted RBP18.64■□□□□ 0.57
HDAC7-224ENST00000488927 KIFC2Q96AC6 838 aa18.64■□□□□ 0.57
HDAC7-224ENST00000488927 ATG4CQ96DT6 458 aa18.64■□□□□ 0.57
HDAC7-224ENST00000488927 ERO1AQ96HE7 468 aa18.64■□□□□ 0.57
HDAC7-224ENST00000488927 FBXO28Q9NVF7 368 aa18.64■□□□□ 0.57
HDAC7-224ENST00000488927 RBPJLQ9UBG7 517 aa18.64■□□□□ 0.57
HDAC7-224ENST00000488927 CTDP1Q9Y5B0 961 aaPredicted RBP18.64■□□□□ 0.57
HDAC7-224ENST00000488927 VWA5AO00534 786 aa18.63■□□□□ 0.57
HDAC7-224ENST00000488927 ZBED4O75132 1171 aa18.63■□□□□ 0.57
HDAC7-224ENST00000488927 CPA1P15085 419 aa18.63■□□□□ 0.57
HDAC7-224ENST00000488927 KIF5BP33176 963 aa18.63■□□□□ 0.57
HDAC7-224ENST00000488927 LBX1P52954 281 aa18.63■□□□□ 0.57
HDAC7-224ENST00000488927 RCAN1P53805 252 aa18.63■□□□□ 0.57
HDAC7-224ENST00000488927 ERVK-9P63128 1117 aa18.63■□□□□ 0.57
HDAC7-224ENST00000488927 ERVK-24P63145 666 aa18.63■□□□□ 0.57
HDAC7-224ENST00000488927 Q6ZUG5 572 aa18.63■□□□□ 0.57
HDAC7-224ENST00000488927 CTCFLQ8NI51 663 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms