RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 ZNF792Q3KQV3 632 aa6.32□□□□□ -1.4
SSR1-209ENST00000488834 SLC23A3Q6PIS1 610 aa6.32□□□□□ -1.4
SSR1-209ENST00000488834 TMC3Q7Z5M5 1100 aa6.32□□□□□ -1.4
SSR1-209ENST00000488834 ENOX1Q8TC92 643 aaKnown RBP6.32□□□□□ -1.4
SSR1-209ENST00000488834 VWCEQ96DN2 955 aa6.32□□□□□ -1.4
SSR1-209ENST00000488834 DSCC1Q9BVC3 393 aa6.32□□□□□ -1.4
SSR1-209ENST00000488834 PRDM14Q9GZV8 571 aa6.32□□□□□ -1.4
SSR1-209ENST00000488834 RC3H2Q9HBD1 1191 aaKnown RBP6.32□□□□□ -1.4
SSR1-209ENST00000488834 PRDM7Q9NQW5 492 aa6.32□□□□□ -1.4
SSR1-209ENST00000488834 ACTR10Q9NZ32 417 aa6.32□□□□□ -1.4
SSR1-209ENST00000488834 LMCD1Q9NZU5 365 aa6.32□□□□□ -1.4
SSR1-209ENST00000488834 COL17A1Q9UMD9 1497 aaPredicted RBP6.32□□□□□ -1.4
SSR1-209ENST00000488834 SHISA3A0PJX4 238 aa6.31□□□□□ -1.4
SSR1-209ENST00000488834 SMAD7O15105 426 aaKnown RBP6.31□□□□□ -1.4
SSR1-209ENST00000488834 FGRP09769 529 aa6.31□□□□□ -1.4
SSR1-209ENST00000488834 SLC7A5Q01650 507 aa6.31□□□□□ -1.4
SSR1-209ENST00000488834 SNW1Q13573 536 aaKnown RBP6.31□□□□□ -1.4
SSR1-209ENST00000488834 TCEAL1Q15170 157 aa6.31□□□□□ -1.4
SSR1-209ENST00000488834 LARP1BQ659C4 914 aaKnown RBP6.31□□□□□ -1.4
SSR1-209ENST00000488834 MCF2L2Q86YR7 1114 aa6.31□□□□□ -1.4
SSR1-209ENST00000488834 C7orf61Q8IZ16 206 aa6.31□□□□□ -1.4
SSR1-209ENST00000488834 FAM169BQ8N8A8 192 aa6.31□□□□□ -1.4
SSR1-209ENST00000488834 SYTL5Q8TDW5 730 aaPredicted RBP6.31□□□□□ -1.4
SSR1-209ENST00000488834 TANGO6Q9C0B7 1094 aa6.31□□□□□ -1.4
SSR1-209ENST00000488834 CHST7Q9NS84 486 aa6.31□□□□□ -1.4
SSR1-209ENST00000488834 SLAMF8Q9P0V8 285 aa6.31□□□□□ -1.4
SSR1-209ENST00000488834 ZNF214Q9UL59 606 aaPredicted RBP6.31□□□□□ -1.4
SSR1-209ENST00000488834 PCDHB10Q9UN67 800 aa6.31□□□□□ -1.4
SSR1-209ENST00000488834 SIGLEC6O43699 453 aa6.3□□□□□ -1.4
SSR1-209ENST00000488834 PRAMEF1O95521 474 aa6.3□□□□□ -1.4
SSR1-209ENST00000488834 SRFP11831 508 aa6.3□□□□□ -1.4
SSR1-209ENST00000488834 CASP7P55210 303 aa6.3□□□□□ -1.4
SSR1-209ENST00000488834 PCBP3P57721 371 aaKnown RBP6.3□□□□□ -1.4
SSR1-209ENST00000488834 AXDND1Q5T1B0 1012 aaPredicted RBP6.3□□□□□ -1.4
SSR1-209ENST00000488834 DCAF15Q66K64 600 aa6.3□□□□□ -1.4
SSR1-209ENST00000488834 HEATR6Q6AI08 1181 aaKnown RBP6.3□□□□□ -1.4
SSR1-209ENST00000488834 VHLLQ6RSH7 139 aa6.3□□□□□ -1.4
SSR1-209ENST00000488834 ADAT2Q7Z6V5 191 aaKnown RBP6.3□□□□□ -1.4
SSR1-209ENST00000488834 ZNF655Q8N720 491 aaPredicted RBP6.3□□□□□ -1.4
SSR1-209ENST00000488834 CCDC120Q96HB5 630 aa6.3□□□□□ -1.4
SSR1-209ENST00000488834 C8orf37Q96NL8 207 aa6.3□□□□□ -1.4
SSR1-209ENST00000488834 KRTAP4-12Q9BQ66 201 aa6.3□□□□□ -1.4
SSR1-209ENST00000488834 ZNF408Q9H9D4 720 aa6.3□□□□□ -1.4
SSR1-209ENST00000488834 GFOD1Q9NXC2 390 aa6.3□□□□□ -1.4
SSR1-209ENST00000488834 PRKAG3Q9UGI9 489 aa6.3□□□□□ -1.4
SSR1-209ENST00000488834 PCDHA11Q9Y5I1 949 aa6.3□□□□□ -1.4
SSR1-209ENST00000488834 LTBP3Q9NS15 1303 aa6.29□□□□□ -1.4
SSR1-209ENST00000488834 STK10O94804 968 aaKnown RBP6.29□□□□□ -1.4
SSR1-209ENST00000488834 ESR1P03372 595 aa6.29□□□□□ -1.4
SSR1-209ENST00000488834 ITGA4P13612 1032 aa6.29□□□□□ -1.4
SSR1-209ENST00000488834 ATP2B1P20020 1258 aa6.29□□□□□ -1.4
SSR1-209ENST00000488834 ETFBP38117 255 aa6.29□□□□□ -1.4
SSR1-209ENST00000488834 GAB4Q2WGN9 574 aa6.29□□□□□ -1.4
SSR1-209ENST00000488834 CWF19L1Q69YN2 538 aaKnown RBP6.29□□□□□ -1.4
SSR1-209ENST00000488834 PPFIBP1Q86W92 1011 aa6.29□□□□□ -1.4
SSR1-209ENST00000488834 DAGLBQ8NCG7 672 aa6.29□□□□□ -1.4
SSR1-209ENST00000488834 ALPK1Q96QP1 1244 aa6.29□□□□□ -1.4
SSR1-209ENST00000488834 HAUS7Q99871 368 aa6.29□□□□□ -1.4
SSR1-209ENST00000488834 HDAC8Q9BY41 377 aa6.29□□□□□ -1.4
SSR1-209ENST00000488834 GBP3Q9H0R5 595 aa6.29□□□□□ -1.4
SSR1-209ENST00000488834 MBNL3Q9NUK0 354 aaKnown RBP6.29□□□□□ -1.4
SSR1-209ENST00000488834 BIN1O00499 593 aa6.28□□□□□ -1.4
SSR1-209ENST00000488834 RNASE1P07998 156 aaKnown RBP6.28□□□□□ -1.4
SSR1-209ENST00000488834 MCTP1Q6DN14 999 aa6.28□□□□□ -1.4
SSR1-209ENST00000488834 KIAA1211LQ6NV74 962 aa6.28□□□□□ -1.4
SSR1-209ENST00000488834 KRTAP19-1Q8IUB9 90 aa6.28□□□□□ -1.4
SSR1-209ENST00000488834 TCTN2Q96GX1 697 aa6.28□□□□□ -1.4
SSR1-209ENST00000488834 GMLQ99445 158 aa6.28□□□□□ -1.4
SSR1-209ENST00000488834 ADGRE2Q9UHX3 823 aa6.28□□□□□ -1.4
SSR1-209ENST00000488834 ADAMTS6Q9UKP5 1117 aa6.28□□□□□ -1.4
SSR1-209ENST00000488834 TCFL5Q9UL49 500 aa6.28□□□□□ -1.4
SSR1-209ENST00000488834 FKTNO75072 461 aa6.27□□□□□ -1.41
SSR1-209ENST00000488834 DDAH1O94760 285 aa6.27□□□□□ -1.41
SSR1-209ENST00000488834 SYPP08247 313 aa6.27□□□□□ -1.41
SSR1-209ENST00000488834 RAC2P15153 192 aa6.27□□□□□ -1.41
SSR1-209ENST00000488834 CD247P20963 164 aa6.27□□□□□ -1.41
SSR1-209ENST00000488834 RPL10P27635 214 aaKnown RBP6.27□□□□□ -1.41
SSR1-209ENST00000488834 HK2P52789 917 aa6.27□□□□□ -1.41
SSR1-209ENST00000488834 NCAPHQ15003 741 aa6.27□□□□□ -1.41
SSR1-209ENST00000488834 FXNQ16595 210 aa6.27□□□□□ -1.41
SSR1-209ENST00000488834 ANKRD39Q53RE8 183 aa6.27□□□□□ -1.41
SSR1-209ENST00000488834 RNF111Q6ZNA4 994 aa6.27□□□□□ -1.41
SSR1-209ENST00000488834 LRRN4CLQ8ND94 238 aa6.27□□□□□ -1.41
SSR1-209ENST00000488834 DHX38Q92620 1227 aaKnown RBP6.27□□□□□ -1.41
SSR1-209ENST00000488834 BRF1Q92994 677 aa6.27□□□□□ -1.41
SSR1-209ENST00000488834 PPP1R14AQ96A00 147 aa6.27□□□□□ -1.41
SSR1-209ENST00000488834 TRIM55Q9BYV6 548 aa6.27□□□□□ -1.41
SSR1-209ENST00000488834 FOXP3Q9BZS1 431 aa6.27□□□□□ -1.41
SSR1-209ENST00000488834 GP6Q9HCN6 339 aa6.27□□□□□ -1.41
SSR1-209ENST00000488834 MINPP1Q9UNW1 487 aa6.27□□□□□ -1.41
SSR1-209ENST00000488834 SUGT1Q9Y2Z0 365 aa6.27□□□□□ -1.41
SSR1-209ENST00000488834 ZNF451Q9Y4E5 1061 aa6.27□□□□□ -1.41
SSR1-209ENST00000488834 PPM1BO75688 479 aa6.26□□□□□ -1.41
SSR1-209ENST00000488834 EPHX1P07099 455 aa6.26□□□□□ -1.41
SSR1-209ENST00000488834 NAT2P11245 290 aa6.26□□□□□ -1.41
SSR1-209ENST00000488834 GTF2F1P35269 517 aaKnown RBP eCLIP6.26□□□□□ -1.41
SSR1-209ENST00000488834 SF3A1Q15459 793 aaKnown RBP6.26□□□□□ -1.41
SSR1-209ENST00000488834 C6orf15Q6UXA7 325 aaPredicted RBP6.26□□□□□ -1.41
SSR1-209ENST00000488834 ANKS3Q6ZW76 656 aa6.26□□□□□ -1.41
SSR1-209ENST00000488834 CKAP2LQ8IYA6 745 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms