RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 MMP1P03956 469 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 ASNSP08243 561 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 SNHG28P0DPA3 235 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 SCG2P13521 617 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 EPHX2P34913 555 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 CAP2P40123 477 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 ECE1P42892 770 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 SLC1A4P43007 532 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 KIF23Q02241 960 aaPredicted RBP7.99□□□□□ -1.13
PDAP1-203ENST00000488214 SAFBQ15424 915 aaKnown RBP eCLIP7.99□□□□□ -1.13
PDAP1-203ENST00000488214 ZYXQ15942 572 aaKnown RBP7.99□□□□□ -1.13
PDAP1-203ENST00000488214 PKN1Q16512 942 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 SLC35G1Q2M3R5 365 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 EAPPQ56P03 285 aaPredicted RBP7.99□□□□□ -1.13
PDAP1-203ENST00000488214 PRAMEF18Q5VWM3 479 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 SLFN13Q68D06 897 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 KCTD1Q719H9 257 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 HEATR3Q7Z4Q2 680 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 SULF1Q8IWU6 871 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 DCAF4Q8WV16 495 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 GPKOWQ92917 476 aaPredicted RBP eCLIP7.99□□□□□ -1.134e-6■□□□□ 9.4
PDAP1-203ENST00000488214 DCPSQ96C86 337 aaKnown RBP7.99□□□□□ -1.13
PDAP1-203ENST00000488214 HOOK2Q96ED9 719 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 SPZ1Q9BXG8 430 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 ZNF341Q9BYN7 854 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 ZSCAN16Q9H4T2 348 aaPredicted RBP7.99□□□□□ -1.13
PDAP1-203ENST00000488214 SH2D4AQ9H788 454 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 BRMS1Q9HCU9 246 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 KCNJ14Q9UNX9 436 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 V9GY48 417 aaPredicted RBP7.99□□□□□ -1.13
PDAP1-203ENST00000488214 IQCA1LA6NCM1 817 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 CYTH3O43739 400 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 NDUFB10O96000 172 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 INPP5BP32019 993 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 KRT2P35908 639 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 IKQ13123 557 aaPredicted RBP7.98□□□□□ -1.13
PDAP1-203ENST00000488214 PFKFB3Q16875 520 aaPredicted RBP7.98□□□□□ -1.13
PDAP1-203ENST00000488214 CSPP1Q1MSJ5 1256 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 TPRNQ4KMQ1 711 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 GPATCH4Q5T3I0 446 aaKnown RBP7.98□□□□□ -1.13
PDAP1-203ENST00000488214 WWC2Q6AWC2 1192 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 USP50Q70EL3 339 aaPredicted RBP7.98□□□□□ -1.13
PDAP1-203ENST00000488214 KRT26Q7Z3Y9 468 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 BRAPQ7Z569 592 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 USP48Q86UV5 1035 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 DIS3L2Q8IYB7 885 aaKnown RBP7.98□□□□□ -1.13
PDAP1-203ENST00000488214 SPICE1Q8N0Z3 855 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 GMCL1P1Q8NEA9 526 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 CCDC148Q8NFR7 591 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 ACER1Q8TDN7 264 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 SHISA4Q96DD7 197 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 RRP36Q96EU6 259 aaKnown RBP7.98□□□□□ -1.13
PDAP1-203ENST00000488214 ZNF396Q96N95 335 aaPredicted RBP7.98□□□□□ -1.13
PDAP1-203ENST00000488214 PIGSQ96S52 555 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 WRNIP1Q96S55 665 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 NUP88Q99567 741 aaPredicted RBP7.98□□□□□ -1.13
PDAP1-203ENST00000488214 ANP32EQ9BTT0 268 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 GLIS2Q9BZE0 524 aaPredicted RBP7.98□□□□□ -1.13
PDAP1-203ENST00000488214 UBA5Q9GZZ9 404 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 VAT1LQ9HCJ6 419 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 GOPCQ9HD26 462 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 FZD1Q9UP38 647 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 TRPM7Q96QT4 1865 aa7.98□□□□□ -1.13
PDAP1-203ENST00000488214 SRCAPQ6ZRS2 3230 aa7.97□□□□□ -1.13
PDAP1-203ENST00000488214 A0A1W2PRG0 241 aa7.97□□□□□ -1.13
PDAP1-203ENST00000488214 PHF20L1A8MW92 1017 aa7.97□□□□□ -1.13
PDAP1-203ENST00000488214 F5H6K3 240 aa7.97□□□□□ -1.13
PDAP1-203ENST00000488214 PRPF40AO75400 957 aaKnown RBP7.97□□□□□ -1.13
PDAP1-203ENST00000488214 SLC16A2P36021 539 aa7.97□□□□□ -1.13
PDAP1-203ENST00000488214 NAPAP54920 295 aa7.97□□□□□ -1.13
PDAP1-203ENST00000488214 MAP3K10Q02779 954 aa7.97□□□□□ -1.13
PDAP1-203ENST00000488214 CEBPZQ03701 1054 aaKnown RBP7.97□□□□□ -1.13
PDAP1-203ENST00000488214 KLRC3Q07444 240 aa7.97□□□□□ -1.13
PDAP1-203ENST00000488214 PRKG1Q13976 671 aa7.97□□□□□ -1.13
PDAP1-203ENST00000488214 SUPT20HL1Q3ZLR7 823 aa7.97□□□□□ -1.13
PDAP1-203ENST00000488214 MYSM1Q5VVJ2 828 aa7.97□□□□□ -1.13
PDAP1-203ENST00000488214 TTBK2Q6IQ55 1244 aa7.97□□□□□ -1.13
PDAP1-203ENST00000488214 SIAH1Q8IUQ4 282 aa7.97□□□□□ -1.13
PDAP1-203ENST00000488214 SCYL3Q8IZE3 742 aa7.97□□□□□ -1.13
PDAP1-203ENST00000488214 TMEM87AQ8NBN3 555 aa7.97□□□□□ -1.13
PDAP1-203ENST00000488214 RGS22Q8NE09 1264 aa7.97□□□□□ -1.13
PDAP1-203ENST00000488214 MKL1Q969V6 931 aa7.97□□□□□ -1.13
PDAP1-203ENST00000488214 GMCL1Q96IK5 515 aa7.97□□□□□ -1.13
PDAP1-203ENST00000488214 FTOQ9C0B1 505 aaKnown RBP eCLIP7.97□□□□□ -1.131e-12■■■■■ 67.7
PDAP1-203ENST00000488214 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.97□□□□□ -1.13
PDAP1-203ENST00000488214 SYNPO2Q9UMS6 1093 aa7.97□□□□□ -1.13
PDAP1-203ENST00000488214 MYH7BA7E2Y1 1941 aa7.97□□□□□ -1.13
PDAP1-203ENST00000488214 A0A0G2JMZ2 1700 aa7.97□□□□□ -1.13
PDAP1-203ENST00000488214 BTBD18B2RXH4 712 aa7.96□□□□□ -1.14
PDAP1-203ENST00000488214 STXBP3O00186 592 aa7.96□□□□□ -1.14
PDAP1-203ENST00000488214 CTNND1O60716 968 aaKnown RBP7.96□□□□□ -1.14
PDAP1-203ENST00000488214 BMP3P12645 472 aa7.96□□□□□ -1.14
PDAP1-203ENST00000488214 NLRP5P59047 1200 aa7.96□□□□□ -1.14
PDAP1-203ENST00000488214 NR5A1Q13285 461 aa7.96□□□□□ -1.14
PDAP1-203ENST00000488214 CDC37Q16543 378 aaPredicted RBP7.96□□□□□ -1.14
PDAP1-203ENST00000488214 FAM83BQ5T0W9 1011 aa7.96□□□□□ -1.14
PDAP1-203ENST00000488214 SYDE2Q5VT97 1194 aa7.96□□□□□ -1.14
PDAP1-203ENST00000488214 TYW1BQ6NUM6 668 aa7.96□□□□□ -1.14
PDAP1-203ENST00000488214 DLK2Q6UY11 383 aa7.96□□□□□ -1.14
PDAP1-203ENST00000488214 NOSTRINQ8IVI9 506 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms