RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 PHOX2BQ99453 314 aa18.78■□□□□ 0.6
U2AF1-211ENST00000486519 TRIM34Q9BYJ4 488 aa18.78■□□□□ 0.6
U2AF1-211ENST00000486519 IL23AQ9NPF7 189 aa18.78■□□□□ 0.6
U2AF1-211ENST00000486519 MCM3APO60318 1980 aa18.77■□□□□ 0.6
U2AF1-211ENST00000486519 NCAPG2Q86XI2 1143 aa18.77■□□□□ 0.6
U2AF1-211ENST00000486519 SHCBP1Q8NEM2 672 aa18.77■□□□□ 0.6
U2AF1-211ENST00000486519 FBXL18Q96ME1 805 aa18.77■□□□□ 0.6
U2AF1-211ENST00000486519 FBXO3Q9UK99 471 aa18.77■□□□□ 0.6
U2AF1-211ENST00000486519 A0A1W2PRG0 241 aa18.76■□□□□ 0.59
U2AF1-211ENST00000486519 PRR33A8MZF0 331 aa18.76■□□□□ 0.59
U2AF1-211ENST00000486519 ADCY6O43306 1168 aa18.76■□□□□ 0.59
U2AF1-211ENST00000486519 MCAMP43121 646 aa18.76■□□□□ 0.59
U2AF1-211ENST00000486519 DYNLL1P63167 89 aaKnown RBP18.76■□□□□ 0.59
U2AF1-211ENST00000486519 TFCP2Q12800 502 aa18.76■□□□□ 0.59
U2AF1-211ENST00000486519 PLS1Q14651 629 aa18.76■□□□□ 0.59
U2AF1-211ENST00000486519 TATDN1Q6P1N9 297 aa18.76■□□□□ 0.59
U2AF1-211ENST00000486519 SPRED2Q7Z698 418 aa18.76■□□□□ 0.59
U2AF1-211ENST00000486519 WDR63Q8IWG1 891 aa18.76■□□□□ 0.59
U2AF1-211ENST00000486519 FAM126BQ8IXS8 530 aa18.76■□□□□ 0.59
U2AF1-211ENST00000486519 TSEN34Q9BSV6 310 aaKnown RBP18.76■□□□□ 0.59
U2AF1-211ENST00000486519 SCN5AQ14524 2016 aa18.76■□□□□ 0.59
U2AF1-211ENST00000486519 USP14P54578 494 aa18.75■□□□□ 0.59
U2AF1-211ENST00000486519 CCDC174Q6PII3 467 aa18.75■□□□□ 0.59
U2AF1-211ENST00000486519 UIMC1Q96RL1 719 aa18.75■□□□□ 0.59
U2AF1-211ENST00000486519 FGBP02675 491 aa18.74■□□□□ 0.59
U2AF1-211ENST00000486519 AKR1A1P14550 325 aa18.74■□□□□ 0.59
U2AF1-211ENST00000486519 POU3F3P20264 500 aaPredicted RBP18.74■□□□□ 0.59
U2AF1-211ENST00000486519 EVX2Q03828 476 aa18.74■□□□□ 0.59
U2AF1-211ENST00000486519 COG2Q14746 738 aa18.74■□□□□ 0.59
U2AF1-211ENST00000486519 NUP133Q8WUM0 1156 aa18.74■□□□□ 0.59
U2AF1-211ENST00000486519 ATG4CQ96DT6 458 aa18.74■□□□□ 0.59
U2AF1-211ENST00000486519 TINF2Q9BSI4 451 aa18.74■□□□□ 0.59
U2AF1-211ENST00000486519 PTPRSQ13332 1948 aa18.73■□□□□ 0.59
U2AF1-211ENST00000486519 PPP4CP60510 307 aa18.73■□□□□ 0.59
U2AF1-211ENST00000486519 MVPQ14764 893 aaKnown RBP18.73■□□□□ 0.59
U2AF1-211ENST00000486519 ZNF792Q3KQV3 632 aa18.73■□□□□ 0.59
U2AF1-211ENST00000486519 ABRAQ8N0Z2 381 aa18.73■□□□□ 0.59
U2AF1-211ENST00000486519 TANGO6Q9C0B7 1094 aa18.73■□□□□ 0.59
U2AF1-211ENST00000486519 SNRKQ9NRH2 765 aa18.73■□□□□ 0.59
U2AF1-211ENST00000486519 LRP2BPQ9P2M1 347 aa18.73■□□□□ 0.59
U2AF1-211ENST00000486519 COG5Q9UP83 839 aa18.73■□□□□ 0.59
U2AF1-211ENST00000486519 USP34Q70CQ2 3546 aa18.73■□□□□ 0.59
U2AF1-211ENST00000486519 ZNF318Q5VUA4 2279 aa18.72■□□□□ 0.59
U2AF1-211ENST00000486519 MOXD2PA6NHM9 499 aa18.72■□□□□ 0.59
U2AF1-211ENST00000486519 CD4P01730 458 aa18.72■□□□□ 0.59
U2AF1-211ENST00000486519 CA3P07451 260 aa18.72■□□□□ 0.59
U2AF1-211ENST00000486519 ARID4AP29374 1257 aaPredicted RBP18.72■□□□□ 0.59
U2AF1-211ENST00000486519 CCL23P55773 120 aa18.72■□□□□ 0.59
U2AF1-211ENST00000486519 SEPT2Q15019 361 aa18.72■□□□□ 0.59
U2AF1-211ENST00000486519 ABCB5Q2M3G0 1257 aa18.72■□□□□ 0.59
U2AF1-211ENST00000486519 NAA16Q6N069 864 aaPredicted RBP18.72■□□□□ 0.59
U2AF1-211ENST00000486519 HLA-CQ95604 372 aa18.72■□□□□ 0.59
U2AF1-211ENST00000486519 NEUROD6Q96NK8 337 aa18.72■□□□□ 0.59
U2AF1-211ENST00000486519 MROH8Q9H579 483 aa18.72■□□□□ 0.59
U2AF1-211ENST00000486519 COPRSQ9NQ92 184 aa18.72■□□□□ 0.59
U2AF1-211ENST00000486519 SLC5A4Q9NY91 659 aa18.72■□□□□ 0.59
U2AF1-211ENST00000486519 NRBP1Q9UHY1 535 aa18.72■□□□□ 0.59
U2AF1-211ENST00000486519 PCDHA11Q9Y5I1 949 aa18.72■□□□□ 0.59
U2AF1-211ENST00000486519 ARVCFO00192 962 aa18.71■□□□□ 0.59
U2AF1-211ENST00000486519 HLA-DOAP06340 250 aa18.71■□□□□ 0.59
U2AF1-211ENST00000486519 ASGR1P07306 291 aa18.71■□□□□ 0.59
U2AF1-211ENST00000486519 FCER1AP12319 257 aa18.71■□□□□ 0.59
U2AF1-211ENST00000486519 DSG3P32926 999 aa18.71■□□□□ 0.59
U2AF1-211ENST00000486519 TMEM132BQ14DG7 1078 aa18.71■□□□□ 0.59
U2AF1-211ENST00000486519 SAMD1Q6SPF0 538 aaPredicted RBP18.71■□□□□ 0.59
U2AF1-211ENST00000486519 WNT8AQ9H1J5 351 aa18.71■□□□□ 0.59
U2AF1-211ENST00000486519 SNAI1O95863 264 aaPredicted RBP18.7■□□□□ 0.58
U2AF1-211ENST00000486519 SHMT1P34896 483 aa18.7■□□□□ 0.58
U2AF1-211ENST00000486519 CERKLQ49MI3 558 aaPredicted RBP18.7■□□□□ 0.58
U2AF1-211ENST00000486519 GLT1D1Q96MS3 346 aa18.7■□□□□ 0.58
U2AF1-211ENST00000486519 MMP19Q99542 508 aa18.7■□□□□ 0.58
U2AF1-211ENST00000486519 NOL10Q9BSC4 688 aaKnown RBP18.7■□□□□ 0.58
U2AF1-211ENST00000486519 HOXC10Q9NYD6 342 aa18.7■□□□□ 0.58
U2AF1-211ENST00000486519 ELP1O95163 1332 aa18.7■□□□□ 0.58
U2AF1-211ENST00000486519 MROH7Q68CQ1 1323 aa18.7■□□□□ 0.58
U2AF1-211ENST00000486519 GTPBP6O43824 516 aaPredicted RBP18.69■□□□□ 0.58
U2AF1-211ENST00000486519 BAG3O95817 575 aa18.69■□□□□ 0.58
U2AF1-211ENST00000486519 TTLL4Q14679 1199 aa18.69■□□□□ 0.58
U2AF1-211ENST00000486519 CLEC10AQ8IUN9 316 aa18.69■□□□□ 0.58
U2AF1-211ENST00000486519 VTI1AQ96AJ9 217 aa18.69■□□□□ 0.58
U2AF1-211ENST00000486519 SLC4A7Q9Y6M7 1214 aa18.69■□□□□ 0.58
U2AF1-211ENST00000486519 A0A0U1RQG5 324 aaPredicted RBP18.68■□□□□ 0.58
U2AF1-211ENST00000486519 RBAK-RBAKDNI3L0D1 243 aa18.68■□□□□ 0.58
U2AF1-211ENST00000486519 CTAGE5O15320 804 aa18.68■□□□□ 0.58
U2AF1-211ENST00000486519 LPXNO60711 386 aa18.68■□□□□ 0.58
U2AF1-211ENST00000486519 ARNTL2Q8WYA1 636 aa18.68■□□□□ 0.58
U2AF1-211ENST00000486519 SCLYQ96I15 445 aa18.68■□□□□ 0.58
U2AF1-211ENST00000486519 MTIF3Q9H2K0 278 aaKnown RBP18.68■□□□□ 0.58
U2AF1-211ENST00000486519 HIPK3Q9H422 1215 aa18.68■□□□□ 0.58
U2AF1-211ENST00000486519 NAV1Q8NEY1 1877 aa18.67■□□□□ 0.58
U2AF1-211ENST00000486519 ZBBXA8MT70 800 aa18.67■□□□□ 0.58
U2AF1-211ENST00000486519 C6orf222P0C671 652 aaPredicted RBP18.67■□□□□ 0.58
U2AF1-211ENST00000486519 UBTFL1P0CB47 393 aaPredicted RBP18.67■□□□□ 0.58
U2AF1-211ENST00000486519 ATP2A2P16615 1042 aaKnown RBP18.67■□□□□ 0.58
U2AF1-211ENST00000486519 PLCG2P16885 1265 aa18.67■□□□□ 0.58
U2AF1-211ENST00000486519 PTGS1P23219 599 aa18.67■□□□□ 0.58
U2AF1-211ENST00000486519 CST5P28325 142 aaPredicted RBP18.67■□□□□ 0.58
U2AF1-211ENST00000486519 PLCD1P51178 756 aa18.67■□□□□ 0.58
U2AF1-211ENST00000486519 GRB10Q13322 594 aa18.67■□□□□ 0.58
U2AF1-211ENST00000486519 SPICE1Q8N0Z3 855 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms