RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 LIFRP42702 1097 aa9.35□□□□□ -0.91
SORT1-205ENST00000483508 GTF2A2P52657 109 aa9.35□□□□□ -0.91
SORT1-205ENST00000483508 NLRP12P59046 1061 aa9.35□□□□□ -0.91
SORT1-205ENST00000483508 MAP3K9P80192 1104 aa9.35□□□□□ -0.91
SORT1-205ENST00000483508 SP3Q02447 781 aa9.35□□□□□ -0.91
SORT1-205ENST00000483508 SLC39A14Q15043 492 aa9.35□□□□□ -0.91
SORT1-205ENST00000483508 TAF1CQ15572 869 aaPredicted RBP9.35□□□□□ -0.91
SORT1-205ENST00000483508 SLC9C2Q5TAH2 1124 aa9.35□□□□□ -0.91
SORT1-205ENST00000483508 SGMS1Q86VZ5 419 aa9.35□□□□□ -0.91
SORT1-205ENST00000483508 LRRC8AQ8IWT6 810 aa9.35□□□□□ -0.91
SORT1-205ENST00000483508 TBC1D22AQ8WUA7 517 aa9.35□□□□□ -0.91
SORT1-205ENST00000483508 HOOK2Q96ED9 719 aa9.35□□□□□ -0.91
SORT1-205ENST00000483508 NOL10Q9BSC4 688 aaKnown RBP9.35□□□□□ -0.91
SORT1-205ENST00000483508 ALG1Q9BT22 464 aa9.35□□□□□ -0.91
SORT1-205ENST00000483508 TMEM106CQ9BVX2 250 aa9.35□□□□□ -0.91
SORT1-205ENST00000483508 FTOQ9C0B1 505 aaKnown RBP eCLIP9.35□□□□□ -0.91
SORT1-205ENST00000483508 CLIC4Q9Y696 253 aa9.35□□□□□ -0.91
SORT1-205ENST00000483508 MYH2Q9UKX2 1941 aa9.35□□□□□ -0.91
SORT1-205ENST00000483508 ZNF532Q9HCE3 1301 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 SSC5DA1L4H1 1573 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 CCL15-CCL14A0A0B4J2E2 113 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 TCRBV5S4A2TA0A5A2 114 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 PATL2C9JE40 543 aaKnown RBP9.34□□□□□ -0.91
SORT1-205ENST00000483508 RIOK3O14730 519 aaKnown RBP9.34□□□□□ -0.91
SORT1-205ENST00000483508 IKBKBO14920 756 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 NRDCO43847 1150 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 TUBB4AP04350 444 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 SLC3A2P08195 630 aaKnown RBP9.34□□□□□ -0.91
SORT1-205ENST00000483508 KCNJ6P48051 423 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 NDUFA8P51970 172 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 RCAN1P53805 252 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 MAP3K12Q12852 859 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 TRIM29Q14134 588 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 KIF22Q14807 665 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 CCL15Q16663 113 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 CCDC102BQ68D86 513 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 APOA5Q6Q788 366 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 NBPF11Q86T75 865 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 TBC1D10CQ8IV04 446 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 ELOA2Q8IYF1 753 aaPredicted RBP9.34□□□□□ -0.91
SORT1-205ENST00000483508 AOPEPQ8N6M6 819 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 CCDC150Q8NCX0 1101 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 CACTINQ8WUQ7 758 aaKnown RBP9.34□□□□□ -0.91
SORT1-205ENST00000483508 TEKT1Q969V4 418 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 OTUD5Q96G74 571 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 CCDC94Q9BW85 323 aaPredicted RBP9.34□□□□□ -0.91
SORT1-205ENST00000483508 KRT23Q9C075 422 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 TMEM39BQ9GZU3 492 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 NBPF3Q9H094 633 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 OSBPL5Q9H0X9 879 aaPredicted RBP9.34□□□□□ -0.91
SORT1-205ENST00000483508 PIH1D3Q9NQM4 214 aaKnown RBP9.34□□□□□ -0.91
SORT1-205ENST00000483508 GPHNQ9NQX3 736 aaPredicted RBP9.34□□□□□ -0.91
SORT1-205ENST00000483508 NRBP1Q9UHY1 535 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 PTPN22Q9Y2R2 807 aa9.34□□□□□ -0.91
SORT1-205ENST00000483508 LAMB1P07942 1786 aa9.33□□□□□ -0.92
SORT1-205ENST00000483508 MAST2Q6P0Q8 1798 aa9.33□□□□□ -0.92
SORT1-205ENST00000483508 A0A1B0GVL5 298 aa9.33□□□□□ -0.92
SORT1-205ENST00000483508 ZBTB43O43298 467 aa9.33□□□□□ -0.92
SORT1-205ENST00000483508 CUTAO60888 179 aa9.33□□□□□ -0.92
SORT1-205ENST00000483508 IDH1O75874 414 aaKnown RBP9.33□□□□□ -0.92
SORT1-205ENST00000483508 ZNF202O95125 648 aa9.33□□□□□ -0.92
SORT1-205ENST00000483508 TNNT1P13805 278 aa9.33□□□□□ -0.92
SORT1-205ENST00000483508 GJA5P36382 358 aa9.33□□□□□ -0.92
SORT1-205ENST00000483508 LRMPQ12912 555 aa9.33□□□□□ -0.92
SORT1-205ENST00000483508 GNL2Q13823 731 aaKnown RBP9.33□□□□□ -0.92
SORT1-205ENST00000483508 TPD52L1Q16890 204 aaPredicted RBP9.33□□□□□ -0.92
SORT1-205ENST00000483508 SLC4A8Q2Y0W8 1093 aa9.33□□□□□ -0.92
SORT1-205ENST00000483508 CCDC144BQ3MJ40 725 aa9.33□□□□□ -0.92
SORT1-205ENST00000483508 AXDND1Q5T1B0 1012 aaPredicted RBP9.33□□□□□ -0.92
SORT1-205ENST00000483508 CYB5R4Q7L1T6 521 aa9.33□□□□□ -0.92
SORT1-205ENST00000483508 CCDC144CPQ8IYA2 1237 aa9.33□□□□□ -0.92
SORT1-205ENST00000483508 ANKRD7Q92527 254 aa9.33□□□□□ -0.92
SORT1-205ENST00000483508 STRBPQ96SI9 672 aaKnown RBP9.33□□□□□ -0.92
SORT1-205ENST00000483508 NEDD4P46934 1319 aa9.32□□□□□ -0.92
SORT1-205ENST00000483508 TESPA1A2RU30 521 aaPredicted RBP9.32□□□□□ -0.92
SORT1-205ENST00000483508 CCDC69A6NI79 296 aa9.32□□□□□ -0.92
SORT1-205ENST00000483508 GOLGA8AA7E2F4 631 aa9.32□□□□□ -0.92
SORT1-205ENST00000483508 KIF28PB7ZC32 967 aa9.32□□□□□ -0.92
SORT1-205ENST00000483508 CBFA2T2O43439 604 aa9.32□□□□□ -0.92
SORT1-205ENST00000483508 FMNL1O95466 1100 aaPredicted RBP9.32□□□□□ -0.92
SORT1-205ENST00000483508 APPP05067 770 aa9.32□□□□□ -0.92
SORT1-205ENST00000483508 POLR3DP05423 398 aaPredicted RBP9.32□□□□□ -0.92
SORT1-205ENST00000483508 CETPP11597 493 aa9.32□□□□□ -0.92
SORT1-205ENST00000483508 PFKFB1P16118 471 aa9.32□□□□□ -0.92
SORT1-205ENST00000483508 U2AF2P26368 475 aaKnown RBP eCLIP9.32□□□□□ -0.92
SORT1-205ENST00000483508 PHKA1P46020 1223 aa9.32□□□□□ -0.92
SORT1-205ENST00000483508 CACNB3P54284 484 aa9.32□□□□□ -0.92
SORT1-205ENST00000483508 HDLBPQ00341 1268 aaKnown RBP9.32□□□□□ -0.92
SORT1-205ENST00000483508 SSRP1Q08945 709 aaKnown RBP9.32□□□□□ -0.92
SORT1-205ENST00000483508 VGLL4Q14135 290 aa9.32□□□□□ -0.92
SORT1-205ENST00000483508 SART3Q15020 963 aaKnown RBP9.32□□□□□ -0.92
SORT1-205ENST00000483508 SLC9C1Q4G0N8 1177 aa9.32□□□□□ -0.92
SORT1-205ENST00000483508 TMEM67Q5HYA8 995 aa9.32□□□□□ -0.92
SORT1-205ENST00000483508 DCAF15Q66K64 600 aa9.32□□□□□ -0.92
SORT1-205ENST00000483508 KRT40Q6A162 431 aa9.32□□□□□ -0.92
SORT1-205ENST00000483508 PI16Q6UXB8 463 aa9.32□□□□□ -0.92
SORT1-205ENST00000483508 NFXL1Q6ZNB6 911 aa9.32□□□□□ -0.92
SORT1-205ENST00000483508 FBXO33Q7Z6M2 555 aa9.32□□□□□ -0.92
SORT1-205ENST00000483508 ZNF710Q8N1W2 664 aa9.32□□□□□ -0.92
SORT1-205ENST00000483508 TMTC2Q8N394 836 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms