RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 TAGLNQ01995 201 aaKnown RBP6.41□□□□□ -1.38
CMSS1-204ENST00000479555 DUSP4Q13115 394 aa6.41□□□□□ -1.38
CMSS1-204ENST00000479555 WAPLQ7Z5K2 1190 aa6.41□□□□□ -1.38
CMSS1-204ENST00000479555 NLRX1Q86UT6 975 aa6.41□□□□□ -1.38
CMSS1-204ENST00000479555 SPPL2CQ8IUH8 684 aa6.41□□□□□ -1.38
CMSS1-204ENST00000479555 RELTQ969Z4 430 aa6.41□□□□□ -1.38
CMSS1-204ENST00000479555 KCNC2Q96PR1 638 aa6.41□□□□□ -1.38
CMSS1-204ENST00000479555 HDAC8Q9BY41 377 aa6.41□□□□□ -1.38
CMSS1-204ENST00000479555 MINPP1Q9UNW1 487 aa6.41□□□□□ -1.38
CMSS1-204ENST00000479555 MINDY4BA8MYZ0 360 aa6.4□□□□□ -1.38
CMSS1-204ENST00000479555 RLBP1P12271 317 aa6.4□□□□□ -1.38
CMSS1-204ENST00000479555 POLR2BP30876 1174 aaKnown RBP6.4□□□□□ -1.38
CMSS1-204ENST00000479555 CHRNEQ04844 493 aa6.4□□□□□ -1.38
CMSS1-204ENST00000479555 NMIQ13287 307 aaPredicted RBP6.4□□□□□ -1.38
CMSS1-204ENST00000479555 VMACQ2NL98 169 aa6.4□□□□□ -1.38
CMSS1-204ENST00000479555 CCDC84Q86UT8 332 aaPredicted RBP6.4□□□□□ -1.38
CMSS1-204ENST00000479555 USHBP1Q8N6Y0 703 aa6.4□□□□□ -1.38
CMSS1-204ENST00000479555 VWCEQ96DN2 955 aa6.4□□□□□ -1.38
CMSS1-204ENST00000479555 MBD1Q9UIS9 605 aaPredicted RBP6.4□□□□□ -1.38
CMSS1-204ENST00000479555 ZMYM5Q9UJ78 669 aa6.4□□□□□ -1.38
CMSS1-204ENST00000479555 ZNF281Q9Y2X9 895 aa6.4□□□□□ -1.38
CMSS1-204ENST00000479555 USP31Q70CQ4 1352 aa6.4□□□□□ -1.39
CMSS1-204ENST00000479555 TMEM82A0PJX8 343 aa6.39□□□□□ -1.39
CMSS1-204ENST00000479555 OR14I1A6ND48 311 aa6.39□□□□□ -1.39
CMSS1-204ENST00000479555 UBOX5O94941 541 aa6.39□□□□□ -1.39
CMSS1-204ENST00000479555 GBP1P32455 592 aa6.39□□□□□ -1.39
CMSS1-204ENST00000479555 SRSF3P84103 164 aaKnown RBP6.39□□□□□ -1.39
CMSS1-204ENST00000479555 ARSHQ5FYA8 562 aa6.39□□□□□ -1.39
CMSS1-204ENST00000479555 SNAP47Q5SQN1 464 aa6.39□□□□□ -1.39
CMSS1-204ENST00000479555 TCERG1LQ5VWI1 586 aa6.39□□□□□ -1.39
CMSS1-204ENST00000479555 AEBP1Q8IUX7 1158 aa6.39□□□□□ -1.39
CMSS1-204ENST00000479555 GOLM1Q8NBJ4 401 aa6.39□□□□□ -1.39
CMSS1-204ENST00000479555 HHIPL1Q96JK4 782 aa6.39□□□□□ -1.39
CMSS1-204ENST00000479555 TMEM74Q96NL1 305 aa6.39□□□□□ -1.39
CMSS1-204ENST00000479555 PLCD4Q9BRC7 762 aa6.39□□□□□ -1.39
CMSS1-204ENST00000479555 PRR36Q9H6K5 1346 aa6.39□□□□□ -1.39
CMSS1-204ENST00000479555 FOXD2O60548 495 aaPredicted RBP6.38□□□□□ -1.39
CMSS1-204ENST00000479555 SNX17Q15036 470 aa6.38□□□□□ -1.39
CMSS1-204ENST00000479555 CEP128Q6ZU80 1094 aa6.38□□□□□ -1.39
CMSS1-204ENST00000479555 MARCH10Q8NA82 808 aaPredicted RBP6.38□□□□□ -1.39
CMSS1-204ENST00000479555 TCTN2Q96GX1 697 aa6.38□□□□□ -1.39
CMSS1-204ENST00000479555 MAP6Q96JE9 813 aa6.38□□□□□ -1.39
CMSS1-204ENST00000479555 ZNF512BQ96KM6 892 aaPredicted RBP6.38□□□□□ -1.39
CMSS1-204ENST00000479555 EPB41L4AQ9HCS5 686 aaPredicted RBP6.38□□□□□ -1.39
CMSS1-204ENST00000479555 GARTP22102 1010 aa6.37□□□□□ -1.39
CMSS1-204ENST00000479555 VIPR1P32241 457 aa6.37□□□□□ -1.39
CMSS1-204ENST00000479555 XPCQ01831 940 aaPredicted RBP6.37□□□□□ -1.39
CMSS1-204ENST00000479555 BBS9Q3SYG4 887 aa6.37□□□□□ -1.39
CMSS1-204ENST00000479555 ZNF385BQ569K4 471 aa6.37□□□□□ -1.39
CMSS1-204ENST00000479555 REC114Q7Z4M0 266 aa6.37□□□□□ -1.39
CMSS1-204ENST00000479555 SYTL5Q8TDW5 730 aaPredicted RBP6.37□□□□□ -1.39
CMSS1-204ENST00000479555 CNTD2Q9H8S5 307 aa6.37□□□□□ -1.39
CMSS1-204ENST00000479555 COPRSQ9NQ92 184 aa6.37□□□□□ -1.39
CMSS1-204ENST00000479555 TCFL5Q9UL49 500 aa6.37□□□□□ -1.39
CMSS1-204ENST00000479555 NISCHQ9Y2I1 1504 aa6.36□□□□□ -1.39
CMSS1-204ENST00000479555 RFXAPO00287 272 aa6.36□□□□□ -1.39
CMSS1-204ENST00000479555 SYPP08247 313 aa6.36□□□□□ -1.39
CMSS1-204ENST00000479555 CHMP4BP1P59074 171 aa6.36□□□□□ -1.39
CMSS1-204ENST00000479555 SLC14A2Q15849 920 aa6.36□□□□□ -1.39
CMSS1-204ENST00000479555 RNF111Q6ZNA4 994 aa6.36□□□□□ -1.39
CMSS1-204ENST00000479555 TMC4Q7Z404 712 aa6.36□□□□□ -1.39
CMSS1-204ENST00000479555 RELL1Q8IUW5 271 aa6.36□□□□□ -1.39
CMSS1-204ENST00000479555 FEZF2Q8TBJ5 459 aa6.36□□□□□ -1.39
CMSS1-204ENST00000479555 CRELD1Q96HD1 420 aa6.36□□□□□ -1.39
CMSS1-204ENST00000479555 ASCC2Q9H1I8 757 aaPredicted RBP6.36□□□□□ -1.39
CMSS1-204ENST00000479555 IRAK3Q9Y616 596 aa6.36□□□□□ -1.39
CMSS1-204ENST00000479555 OTOL1A6NHN0 477 aaPredicted RBP6.35□□□□□ -1.39
CMSS1-204ENST00000479555 SLC22A31A6NKX4 558 aa6.35□□□□□ -1.39
CMSS1-204ENST00000479555 MEIS1O00470 390 aa6.35□□□□□ -1.39
CMSS1-204ENST00000479555 RGS13O14921 159 aa6.35□□□□□ -1.39
CMSS1-204ENST00000479555 NRDCO43847 1150 aa6.35□□□□□ -1.39
CMSS1-204ENST00000479555 PRAMEF1O95521 474 aa6.35□□□□□ -1.39
CMSS1-204ENST00000479555 MPP2Q14168 576 aa6.35□□□□□ -1.39
CMSS1-204ENST00000479555 SYT8Q8NBV8 401 aa6.35□□□□□ -1.39
CMSS1-204ENST00000479555 SIGLEC10Q96LC7 697 aa6.35□□□□□ -1.39
CMSS1-204ENST00000479555 XYLT2Q9H1B5 865 aa6.35□□□□□ -1.39
CMSS1-204ENST00000479555 BRMS1Q9HCU9 246 aa6.35□□□□□ -1.39
CMSS1-204ENST00000479555 KBTBD4Q9NVX7 518 aa6.35□□□□□ -1.39
CMSS1-204ENST00000479555 SIRT5Q9NXA8 310 aa6.35□□□□□ -1.39
CMSS1-204ENST00000479555 VTI1BQ9UEU0 232 aa6.35□□□□□ -1.39
CMSS1-204ENST00000479555 JAG2Q9Y219 1238 aa6.35□□□□□ -1.39
CMSS1-204ENST00000479555 RAG1P15918 1043 aa6.34□□□□□ -1.39
CMSS1-204ENST00000479555 AFF3P51826 1226 aaKnown RBP6.34□□□□□ -1.39
CMSS1-204ENST00000479555 CDR1P51861 262 aa6.34□□□□□ -1.39
CMSS1-204ENST00000479555 KRTAP10-2P60368 255 aa6.34□□□□□ -1.39
CMSS1-204ENST00000479555 NFIXQ14938 502 aa6.34□□□□□ -1.39
CMSS1-204ENST00000479555 NBPF9Q3BBW0 867 aa6.34□□□□□ -1.39
CMSS1-204ENST00000479555 NBPF12Q5TAG4 269 aaPredicted RBP6.34□□□□□ -1.39
CMSS1-204ENST00000479555 DIEXFQ68CQ4 756 aaKnown RBP6.34□□□□□ -1.39
CMSS1-204ENST00000479555 OVOS1Q6IE37 1185 aa6.34□□□□□ -1.39
CMSS1-204ENST00000479555 FAM196AQ6ZSG2 479 aa6.34□□□□□ -1.39
CMSS1-204ENST00000479555 SND1Q7KZF4 910 aaKnown RBP eCLIP6.34□□□□□ -1.39
CMSS1-204ENST00000479555 ZDHHC14Q8IZN3 488 aa6.34□□□□□ -1.39
CMSS1-204ENST00000479555 DAGLBQ8NCG7 672 aa6.34□□□□□ -1.39
CMSS1-204ENST00000479555 DACT3Q96B18 629 aaPredicted RBP6.34□□□□□ -1.39
CMSS1-204ENST00000479555 GPR55Q9Y2T6 319 aaPredicted RBP6.34□□□□□ -1.39
CMSS1-204ENST00000479555 PCDHB14Q9Y5E9 798 aa6.34□□□□□ -1.39
CMSS1-204ENST00000479555 SSU72P8A0A1W2PR75 194 aa6.33□□□□□ -1.4
CMSS1-204ENST00000479555 PCBP3P57721 371 aaKnown RBP6.33□□□□□ -1.4
CMSS1-204ENST00000479555 FBXL19Q6PCT2 694 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms