RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 PSPNO60542 156 aa6.71□□□□□ -1.34
CDC42BPA-212ENST00000478573 GARTP22102 1010 aa6.71□□□□□ -1.34
CDC42BPA-212ENST00000478573 RNF4P78317 190 aa6.71□□□□□ -1.34
CDC42BPA-212ENST00000478573 NR0B2Q15466 257 aa6.71□□□□□ -1.34
CDC42BPA-212ENST00000478573 FBXL19Q6PCT2 694 aa6.71□□□□□ -1.34
CDC42BPA-212ENST00000478573 WAPLQ7Z5K2 1190 aa6.71□□□□□ -1.34
CDC42BPA-212ENST00000478573 ANKS4BQ8N8V4 417 aa6.71□□□□□ -1.34
CDC42BPA-212ENST00000478573 FOXP3Q9BZS1 431 aa6.71□□□□□ -1.34
CDC42BPA-212ENST00000478573 MCOLN1Q9GZU1 580 aa6.71□□□□□ -1.34
CDC42BPA-212ENST00000478573 BRMS1Q9HCU9 246 aa6.71□□□□□ -1.34
CDC42BPA-212ENST00000478573 YBX2Q9Y2T7 364 aaKnown RBP6.71□□□□□ -1.34
CDC42BPA-212ENST00000478573 SLC22A31A6NKX4 558 aa6.7□□□□□ -1.34
CDC42BPA-212ENST00000478573 FKTNO75072 461 aa6.7□□□□□ -1.34
CDC42BPA-212ENST00000478573 USP2O75604 605 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-212ENST00000478573 UBOX5O94941 541 aa6.7□□□□□ -1.34
CDC42BPA-212ENST00000478573 ZNF326Q5BKZ1 582 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-212ENST00000478573 GIPC2Q8TF65 315 aa6.7□□□□□ -1.34
CDC42BPA-212ENST00000478573 IRF2BPLQ9H1B7 796 aa6.7□□□□□ -1.34
CDC42BPA-212ENST00000478573 GMIPQ9P107 970 aa6.7□□□□□ -1.34
CDC42BPA-212ENST00000478573 SUPT16HQ9Y5B9 1047 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-212ENST00000478573 POLR2BP30876 1174 aaKnown RBP6.69□□□□□ -1.34
CDC42BPA-212ENST00000478573 EIF4A3P38919 411 aaKnown RBP6.69□□□□□ -1.34
CDC42BPA-212ENST00000478573 ADGRF1Q5T601 910 aa6.69□□□□□ -1.34
CDC42BPA-212ENST00000478573 OVOS1Q6IE37 1185 aa6.69□□□□□ -1.34
CDC42BPA-212ENST00000478573 TMC3Q7Z5M5 1100 aa6.69□□□□□ -1.34
CDC42BPA-212ENST00000478573 HDAC8Q9BY41 377 aa6.69□□□□□ -1.34
CDC42BPA-212ENST00000478573 MYOCOSA0A1B0GUC4 107 aa6.68□□□□□ -1.34
CDC42BPA-212ENST00000478573 PCBP3P57721 371 aaKnown RBP6.68□□□□□ -1.34
CDC42BPA-212ENST00000478573 SNW1Q13573 536 aaKnown RBP6.68□□□□□ -1.34
CDC42BPA-212ENST00000478573 SLC14A2Q15849 920 aa6.68□□□□□ -1.34
CDC42BPA-212ENST00000478573 LILRA6Q6PI73 481 aa6.68□□□□□ -1.34
CDC42BPA-212ENST00000478573 ERMP1Q7Z2K6 904 aa6.68□□□□□ -1.34
CDC42BPA-212ENST00000478573 SYTL5Q8TDW5 730 aaPredicted RBP6.68□□□□□ -1.34
CDC42BPA-212ENST00000478573 LINC01599Q8WXQ3 324 aa6.68□□□□□ -1.34
CDC42BPA-212ENST00000478573 VWCEQ96DN2 955 aa6.68□□□□□ -1.34
CDC42BPA-212ENST00000478573 TCTN2Q96GX1 697 aa6.68□□□□□ -1.34
CDC42BPA-212ENST00000478573 ZNF512BQ96KM6 892 aaPredicted RBP6.68□□□□□ -1.34
CDC42BPA-212ENST00000478573 SGPP1Q9BX95 441 aa6.68□□□□□ -1.34
CDC42BPA-212ENST00000478573 TCFL5Q9UL49 500 aa6.68□□□□□ -1.34
CDC42BPA-212ENST00000478573 SYPP08247 313 aa6.67□□□□□ -1.34
CDC42BPA-212ENST00000478573 INHBBP09529 407 aa6.67□□□□□ -1.34
CDC42BPA-212ENST00000478573 VAMP1P23763 118 aa6.67□□□□□ -1.34
CDC42BPA-212ENST00000478573 MCM4P33991 863 aa6.67□□□□□ -1.34
CDC42BPA-212ENST00000478573 DLG4P78352 724 aa6.67□□□□□ -1.34
CDC42BPA-212ENST00000478573 SNX17Q15036 470 aa6.67□□□□□ -1.34
CDC42BPA-212ENST00000478573 RNF111Q6ZNA4 994 aa6.67□□□□□ -1.34
CDC42BPA-212ENST00000478573 GK5Q6ZS86 529 aa6.67□□□□□ -1.34
CDC42BPA-212ENST00000478573 CEP128Q6ZU80 1094 aa6.67□□□□□ -1.34
CDC42BPA-212ENST00000478573 USHBP1Q8N6Y0 703 aa6.67□□□□□ -1.34
CDC42BPA-212ENST00000478573 ENOX1Q8TC92 643 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-212ENST00000478573 ZNF296Q8WUU4 475 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-212ENST00000478573 G6PC3Q9BUM1 346 aa6.67□□□□□ -1.34
CDC42BPA-212ENST00000478573 LRRC3Q9BY71 257 aa6.67□□□□□ -1.34
CDC42BPA-212ENST00000478573 KRTAP4-9Q9BYQ8 210 aa6.67□□□□□ -1.34
CDC42BPA-212ENST00000478573 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.67□□□□□ -1.34
CDC42BPA-212ENST00000478573 KIAA1522Q9P206 1035 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-212ENST00000478573 GGT7Q9UJ14 662 aa6.67□□□□□ -1.34
CDC42BPA-212ENST00000478573 ROBO2Q9HCK4 1378 aa6.67□□□□□ -1.34
CDC42BPA-212ENST00000478573 MEIS1O00470 390 aa6.66□□□□□ -1.34
CDC42BPA-212ENST00000478573 SEMA7AO75326 666 aa6.66□□□□□ -1.34
CDC42BPA-212ENST00000478573 CLEC3AO75596 197 aa6.66□□□□□ -1.34
CDC42BPA-212ENST00000478573 CRKP46108 304 aa6.66□□□□□ -1.34
CDC42BPA-212ENST00000478573 NBPF9Q3BBW0 867 aa6.66□□□□□ -1.34
CDC42BPA-212ENST00000478573 SEZ6Q53EL9 994 aa6.66□□□□□ -1.34
CDC42BPA-212ENST00000478573 NBPF12Q5TAG4 269 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPA-212ENST00000478573 HS2ST1Q7LGA3 356 aa6.66□□□□□ -1.34
CDC42BPA-212ENST00000478573 DAGLBQ8NCG7 672 aa6.66□□□□□ -1.34
CDC42BPA-212ENST00000478573 SHISA4Q96DD7 197 aa6.66□□□□□ -1.34
CDC42BPA-212ENST00000478573 MAP6Q96JE9 813 aa6.66□□□□□ -1.34
CDC42BPA-212ENST00000478573 ZNF552Q9H707 407 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPA-212ENST00000478573 UBP1Q9NZI7 540 aa6.66□□□□□ -1.34
CDC42BPA-212ENST00000478573 CNOT6Q9ULM6 557 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-212ENST00000478573 OR14I1A6ND48 311 aa6.65□□□□□ -1.34
CDC42BPA-212ENST00000478573 PEX10O60683 326 aa6.65□□□□□ -1.34
CDC42BPA-212ENST00000478573 PRAMEF1O95521 474 aa6.65□□□□□ -1.34
CDC42BPA-212ENST00000478573 APOBRQ0VD83 1088 aa6.65□□□□□ -1.34
CDC42BPA-212ENST00000478573 ZPBP2Q6X784 338 aa6.65□□□□□ -1.34
CDC42BPA-212ENST00000478573 TTLL10Q6ZVT0 673 aa6.65□□□□□ -1.34
CDC42BPA-212ENST00000478573 AMIGO3Q86WK7 504 aa6.65□□□□□ -1.34
CDC42BPA-212ENST00000478573 ZNF655Q8N720 491 aaPredicted RBP6.65□□□□□ -1.34
CDC42BPA-212ENST00000478573 MRRFQ96E11 262 aaKnown RBP6.65□□□□□ -1.34
CDC42BPA-212ENST00000478573 MKRN2Q9H000 416 aaKnown RBP6.65□□□□□ -1.34
CDC42BPA-212ENST00000478573 MINPP1Q9UNW1 487 aa6.65□□□□□ -1.34
CDC42BPA-212ENST00000478573 TEX51A0A1B0GUA7 166 aa6.64□□□□□ -1.35
CDC42BPA-212ENST00000478573 TMEM82A0PJX8 343 aa6.64□□□□□ -1.35
CDC42BPA-212ENST00000478573 GREM1O60565 184 aa6.64□□□□□ -1.35
CDC42BPA-212ENST00000478573 ATE1O95260 518 aa6.64□□□□□ -1.35
CDC42BPA-212ENST00000478573 EFEMP2O95967 443 aa6.64□□□□□ -1.35
CDC42BPA-212ENST00000478573 SDHBP21912 280 aa6.64□□□□□ -1.35
CDC42BPA-212ENST00000478573 CLCQ05315 142 aa6.64□□□□□ -1.35
CDC42BPA-212ENST00000478573 RAD51AP2Q09MP3 1159 aa6.64□□□□□ -1.35
CDC42BPA-212ENST00000478573 NLRC3Q7RTR2 1065 aa6.64□□□□□ -1.35
CDC42BPA-212ENST00000478573 NLRX1Q86UT6 975 aa6.64□□□□□ -1.35
CDC42BPA-212ENST00000478573 ATG4CQ96DT6 458 aa6.64□□□□□ -1.35
CDC42BPA-212ENST00000478573 HHIPL1Q96JK4 782 aa6.64□□□□□ -1.35
CDC42BPA-212ENST00000478573 PRDM14Q9GZV8 571 aa6.64□□□□□ -1.35
CDC42BPA-212ENST00000478573 KCNQ5Q9NR82 932 aa6.64□□□□□ -1.35
CDC42BPA-212ENST00000478573 IGSF5Q9NSI5 407 aa6.64□□□□□ -1.35
CDC42BPA-212ENST00000478573 ADAMTS1Q9UHI8 967 aa6.64□□□□□ -1.35
CDC42BPA-212ENST00000478573 ZNF281Q9Y2X9 895 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms