RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 STOX1Q6ZVD7 989 aa12.12□□□□□ -0.47
HDAC6-222ENST00000478095 RASGRP2Q7LDG7 609 aa12.12□□□□□ -0.47
HDAC6-222ENST00000478095 ERO1AQ96HE7 468 aa12.12□□□□□ -0.47
HDAC6-222ENST00000478095 PAGR1Q9BTK6 254 aa12.12□□□□□ -0.47
HDAC6-222ENST00000478095 ISY1Q9ULR0 285 aaKnown RBP12.12□□□□□ -0.47
HDAC6-222ENST00000478095 LOC285556D6RIA3 1793 aa12.11□□□□□ -0.47
HDAC6-222ENST00000478095 F5H6K3 240 aa12.11□□□□□ -0.47
HDAC6-222ENST00000478095 SLC27A2O14975 620 aa12.11□□□□□ -0.47
HDAC6-222ENST00000478095 WDR46O15213 610 aaKnown RBP12.11□□□□□ -0.47
HDAC6-222ENST00000478095 CTGFP29279 349 aa12.11□□□□□ -0.47
HDAC6-222ENST00000478095 LACTBP83111 547 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-222ENST00000478095 KLRC3Q07444 240 aa12.11□□□□□ -0.47
HDAC6-222ENST00000478095 POTEEQ6S8J3 1075 aa12.11□□□□□ -0.47
HDAC6-222ENST00000478095 CTU1Q7Z7A3 348 aaKnown RBP12.11□□□□□ -0.47
HDAC6-222ENST00000478095 SLC39A7Q92504 469 aa12.11□□□□□ -0.47
HDAC6-222ENST00000478095 KRT23Q9C075 422 aa12.11□□□□□ -0.47
HDAC6-222ENST00000478095 CNNM2Q9H8M5 875 aa12.11□□□□□ -0.47
HDAC6-222ENST00000478095 TXNRD2Q9NNW7 524 aa12.11□□□□□ -0.47
HDAC6-222ENST00000478095 TRIM17Q9Y577 477 aa12.11□□□□□ -0.47
HDAC6-222ENST00000478095 SPDYE16A6NNV3 312 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-222ENST00000478095 E7EWF7 191 aa12.1□□□□□ -0.47
HDAC6-222ENST00000478095 FLOT1O75955 427 aa12.1□□□□□ -0.47
HDAC6-222ENST00000478095 GCLCP48506 637 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-222ENST00000478095 TRDNQ13061 729 aa12.1□□□□□ -0.47
HDAC6-222ENST00000478095 KIF22Q14807 665 aa12.1□□□□□ -0.47
HDAC6-222ENST00000478095 FAM110CQ1W6H9 321 aa12.1□□□□□ -0.47
HDAC6-222ENST00000478095 CREB3L3Q68CJ9 461 aa12.1□□□□□ -0.47
HDAC6-222ENST00000478095 SLFN13Q68D06 897 aa12.1□□□□□ -0.47
HDAC6-222ENST00000478095 CYB5R4Q7L1T6 521 aa12.1□□□□□ -0.47
HDAC6-222ENST00000478095 TNS4Q8IZW8 715 aa12.1□□□□□ -0.47
HDAC6-222ENST00000478095 MKL1Q969V6 931 aa12.1□□□□□ -0.47
HDAC6-222ENST00000478095 TCP11L1Q9NUJ3 509 aa12.1□□□□□ -0.47
HDAC6-222ENST00000478095 FBXO28Q9NVF7 368 aa12.1□□□□□ -0.47
HDAC6-222ENST00000478095 ZSWIM5Q9P217 1185 aa12.1□□□□□ -0.47
HDAC6-222ENST00000478095 RBPJLQ9UBG7 517 aa12.1□□□□□ -0.47
HDAC6-222ENST00000478095 FMNL1O95466 1100 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-222ENST00000478095 C7P10643 843 aa12.09□□□□□ -0.47
HDAC6-222ENST00000478095 MCCP23508 829 aa12.09□□□□□ -0.47
HDAC6-222ENST00000478095 PSMC4P43686 418 aa12.09□□□□□ -0.47
HDAC6-222ENST00000478095 NOVP48745 357 aa12.09□□□□□ -0.47
HDAC6-222ENST00000478095 COG2Q14746 738 aa12.09□□□□□ -0.47
HDAC6-222ENST00000478095 NECTIN1Q15223 517 aa12.09□□□□□ -0.47
HDAC6-222ENST00000478095 PPP4R3BQ5MIZ7 849 aa12.09□□□□□ -0.47
HDAC6-222ENST00000478095 RCSD1Q6JBY9 416 aa12.09□□□□□ -0.47
HDAC6-222ENST00000478095 CHST3Q7LGC8 479 aa12.09□□□□□ -0.47
HDAC6-222ENST00000478095 OTOP1Q7RTM1 612 aa12.09□□□□□ -0.47
HDAC6-222ENST00000478095 RALYLQ86SE5 291 aaKnown RBP12.09□□□□□ -0.47
HDAC6-222ENST00000478095 IQCA1Q86XH1 822 aa12.09□□□□□ -0.47
HDAC6-222ENST00000478095 GMCL1P1Q8NEA9 526 aa12.09□□□□□ -0.47
HDAC6-222ENST00000478095 ATG4CQ96DT6 458 aa12.09□□□□□ -0.47
HDAC6-222ENST00000478095 TRIM47Q96LD4 638 aa12.09□□□□□ -0.47
HDAC6-222ENST00000478095 ZSCAN10Q96SZ4 725 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-222ENST00000478095 TMEM47Q9BQJ4 181 aa12.09□□□□□ -0.47
HDAC6-222ENST00000478095 UBAC1Q9BSL1 405 aa12.09□□□□□ -0.47
HDAC6-222ENST00000478095 MCOLN1Q9GZU1 580 aa12.09□□□□□ -0.47
HDAC6-222ENST00000478095 EFCC1Q9HA90 598 aa12.09□□□□□ -0.47
HDAC6-222ENST00000478095 PTPRFP10586 1907 aa12.09□□□□□ -0.47
HDAC6-222ENST00000478095 GREB1LQ9C091 1923 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-222ENST00000478095 TNKSO95271 1327 aa12.09□□□□□ -0.47
HDAC6-222ENST00000478095 CNMDO75829 334 aa12.08□□□□□ -0.48
HDAC6-222ENST00000478095 TOP1P11387 765 aaKnown RBP12.08□□□□□ -0.48
HDAC6-222ENST00000478095 SLC1A4P43007 532 aa12.08□□□□□ -0.48
HDAC6-222ENST00000478095 COL9A3Q14050 684 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-222ENST00000478095 Q3C1V9 767 aa12.08□□□□□ -0.48
HDAC6-222ENST00000478095 ENAHQ8N8S7 591 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-222ENST00000478095 GPRC5AQ8NFJ5 357 aa12.08□□□□□ -0.48
HDAC6-222ENST00000478095 NCOA7Q8NI08 942 aa12.08□□□□□ -0.48
HDAC6-222ENST00000478095 GTF3C2Q8WUA4 911 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-222ENST00000478095 BTBD7Q9P203 1132 aa12.08□□□□□ -0.48
HDAC6-222ENST00000478095 MORF4L1Q9UBU8 362 aa12.08□□□□□ -0.48
HDAC6-222ENST00000478095 SYNPO2Q9UMS6 1093 aa12.08□□□□□ -0.48
HDAC6-222ENST00000478095 TNPO2O14787 897 aaKnown RBP12.07□□□□□ -0.48
HDAC6-222ENST00000478095 BMP3P12645 472 aa12.07□□□□□ -0.48
HDAC6-222ENST00000478095 FCGRTP55899 365 aa12.07□□□□□ -0.48
HDAC6-222ENST00000478095 ERVK-9P63128 1117 aa12.07□□□□□ -0.48
HDAC6-222ENST00000478095 ERVK-24P63145 666 aa12.07□□□□□ -0.48
HDAC6-222ENST00000478095 IKQ13123 557 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-222ENST00000478095 CCDC96Q2M329 555 aa12.07□□□□□ -0.48
HDAC6-222ENST00000478095 LBX2Q6XYB7 198 aa12.07□□□□□ -0.48
HDAC6-222ENST00000478095 KCTD1Q719H9 257 aa12.07□□□□□ -0.48
HDAC6-222ENST00000478095 MB21D2Q8IYB1 491 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-222ENST00000478095 KIFC2Q96AC6 838 aa12.07□□□□□ -0.48
HDAC6-222ENST00000478095 GMCL1Q96IK5 515 aa12.07□□□□□ -0.48
HDAC6-222ENST00000478095 SLF1Q9BQI6 1058 aa12.07□□□□□ -0.48
HDAC6-222ENST00000478095 PORCNQ9H237 461 aa12.07□□□□□ -0.48
HDAC6-222ENST00000478095 KAT14Q9H8E8 782 aa12.07□□□□□ -0.48
HDAC6-222ENST00000478095 HOXC10Q9NYD6 342 aa12.07□□□□□ -0.48
HDAC6-222ENST00000478095 PPP1R9AQ9ULJ8 1098 aa12.07□□□□□ -0.48
HDAC6-222ENST00000478095 RABGAP1Q9Y3P9 1069 aa12.07□□□□□ -0.48
HDAC6-222ENST00000478095 FRMPD2Q68DX3 1309 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-222ENST00000478095 MYH8P13535 1937 aa12.06□□□□□ -0.48
HDAC6-222ENST00000478095 TMEM232C9JQI7 657 aa12.06□□□□□ -0.48
HDAC6-222ENST00000478095 IFIT3O14879 490 aaKnown RBP12.06□□□□□ -0.48
HDAC6-222ENST00000478095 REC8O95072 547 aa12.06□□□□□ -0.48
HDAC6-222ENST00000478095 NT5C2P49902 561 aa12.06□□□□□ -0.48
HDAC6-222ENST00000478095 ANTXR2P58335 489 aa12.06□□□□□ -0.48
HDAC6-222ENST00000478095 PLS1Q14651 629 aa12.06□□□□□ -0.48
HDAC6-222ENST00000478095 ARHGEF6Q15052 776 aa12.06□□□□□ -0.48
HDAC6-222ENST00000478095 IFIT1BQ5T764 474 aaKnown RBP12.06□□□□□ -0.48
HDAC6-222ENST00000478095 WDR78Q5VTH9 848 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms