RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 SMCR8Q8TEV9 937 aaPredicted RBP19.93■□□□□ 0.78
SCAF11-206ENST00000474828 IL17RAQ96F46 866 aa19.93■□□□□ 0.78
SCAF11-206ENST00000474828 RABGAP1Q9Y3P9 1069 aa19.93■□□□□ 0.78
SCAF11-206ENST00000474828 WDR19Q8NEZ3 1342 aa19.93■□□□□ 0.78
SCAF11-206ENST00000474828 EIF5BO60841 1220 aaKnown RBP19.92■□□□□ 0.78
SCAF11-206ENST00000474828 CNMDO75829 334 aa19.92■□□□□ 0.78
SCAF11-206ENST00000474828 COL9A3Q14050 684 aaPredicted RBP19.92■□□□□ 0.78
SCAF11-206ENST00000474828 IGDCC4Q8TDY8 1250 aa19.92■□□□□ 0.78
SCAF11-206ENST00000474828 DCAF4Q8WV16 495 aa19.92■□□□□ 0.78
SCAF11-206ENST00000474828 ERO1AQ96HE7 468 aa19.92■□□□□ 0.78
SCAF11-206ENST00000474828 TXNRD2Q9NNW7 524 aa19.92■□□□□ 0.78
SCAF11-206ENST00000474828 PPP1R9AQ9ULJ8 1098 aa19.92■□□□□ 0.78
SCAF11-206ENST00000474828 TNKSO95271 1327 aa19.92■□□□□ 0.78
SCAF11-206ENST00000474828 GNRH1P01148 92 aa19.91■□□□□ 0.78
SCAF11-206ENST00000474828 KRT32Q14532 448 aa19.91■□□□□ 0.78
SCAF11-206ENST00000474828 FAM83BQ5T0W9 1011 aa19.91■□□□□ 0.78
SCAF11-206ENST00000474828 BTNL9Q6UXG8 535 aa19.91■□□□□ 0.78
SCAF11-206ENST00000474828 RALYLQ86SE5 291 aaKnown RBP19.91■□□□□ 0.78
SCAF11-206ENST00000474828 MB21D1Q8N884 522 aa19.91■□□□□ 0.78
SCAF11-206ENST00000474828 REPS2Q8NFH8 660 aa19.91■□□□□ 0.78
SCAF11-206ENST00000474828 ZKSCAN3Q9BRR0 538 aa19.91■□□□□ 0.78
SCAF11-206ENST00000474828 HTTP42858 3142 aa19.91■□□□□ 0.78
SCAF11-206ENST00000474828 BMP3P12645 472 aa19.9■□□□□ 0.78
SCAF11-206ENST00000474828 ZKSCAN1P17029 563 aaPredicted RBP19.9■□□□□ 0.78
SCAF11-206ENST00000474828 CTGFP29279 349 aa19.9■□□□□ 0.78
SCAF11-206ENST00000474828 EXOSC10Q01780 885 aaKnown RBP19.9■□□□□ 0.78
SCAF11-206ENST00000474828 NUP88Q99567 741 aaPredicted RBP19.9■□□□□ 0.78
SCAF11-206ENST00000474828 UBAC1Q9BSL1 405 aa19.9■□□□□ 0.78
SCAF11-206ENST00000474828 TANGO6Q9C0B7 1094 aa19.9■□□□□ 0.78
SCAF11-206ENST00000474828 FBXO28Q9NVF7 368 aa19.9■□□□□ 0.78
SCAF11-206ENST00000474828 FEM1BQ9UK73 627 aa19.9■□□□□ 0.78
SCAF11-206ENST00000474828 ATP2A1O14983 1001 aa19.89■□□□□ 0.77
SCAF11-206ENST00000474828 FLOT1O75955 427 aa19.89■□□□□ 0.77
SCAF11-206ENST00000474828 PDHBP11177 359 aa19.89■□□□□ 0.77
SCAF11-206ENST00000474828 MCM5P33992 734 aa19.89■□□□□ 0.77
SCAF11-206ENST00000474828 ERVK-9P63128 1117 aa19.89■□□□□ 0.77
SCAF11-206ENST00000474828 ERVK-24P63145 666 aa19.89■□□□□ 0.77
SCAF11-206ENST00000474828 C8orf34Q49A92 452 aa19.89■□□□□ 0.77
SCAF11-206ENST00000474828 FBXL16Q8N461 479 aa19.89■□□□□ 0.77
SCAF11-206ENST00000474828 ANKRD13CQ8N6S4 541 aa19.89■□□□□ 0.77
SCAF11-206ENST00000474828 PRPF38AQ8NAV1 312 aaKnown RBP19.89■□□□□ 0.77
SCAF11-206ENST00000474828 PNMA1Q8ND90 353 aa19.89■□□□□ 0.77
SCAF11-206ENST00000474828 GPRC5AQ8NFJ5 357 aa19.89■□□□□ 0.77
SCAF11-206ENST00000474828 NEK1Q96PY6 1258 aa19.89■□□□□ 0.77
SCAF11-206ENST00000474828 BTBD7Q9P203 1132 aa19.89■□□□□ 0.77
SCAF11-206ENST00000474828 CASP8AP2Q9UKL3 1982 aa19.89■□□□□ 0.77
SCAF11-206ENST00000474828 SNX14Q9Y5W7 946 aa19.89■□□□□ 0.77
SCAF11-206ENST00000474828 VWA5AO00534 786 aa19.88■□□□□ 0.77
SCAF11-206ENST00000474828 FDX1P10109 184 aa19.88■□□□□ 0.77
SCAF11-206ENST00000474828 MCCP23508 829 aa19.88■□□□□ 0.77
SCAF11-206ENST00000474828 LIFRP42702 1097 aa19.88■□□□□ 0.77
SCAF11-206ENST00000474828 Q3C1V9 767 aa19.88■□□□□ 0.77
SCAF11-206ENST00000474828 ADCK5Q3MIX3 580 aa19.88■□□□□ 0.77
SCAF11-206ENST00000474828 CTU1Q7Z7A3 348 aaKnown RBP19.88■□□□□ 0.77
SCAF11-206ENST00000474828 CD99L2Q8TCZ2 262 aa19.88■□□□□ 0.77
SCAF11-206ENST00000474828 TMEM87BQ96K49 555 aa19.88■□□□□ 0.77
SCAF11-206ENST00000474828 SLF1Q9BQI6 1058 aa19.88■□□□□ 0.77
SCAF11-206ENST00000474828 CCDC85CA6NKD9 419 aa19.87■□□□□ 0.77
SCAF11-206ENST00000474828 HMGB1P09429 215 aaKnown RBP19.87■□□□□ 0.77
SCAF11-206ENST00000474828 SLC1A4P43007 532 aa19.87■□□□□ 0.77
SCAF11-206ENST00000474828 ZNF543Q08ER8 600 aa19.87■□□□□ 0.77
SCAF11-206ENST00000474828 ARHGEF6Q15052 776 aa19.87■□□□□ 0.77
SCAF11-206ENST00000474828 OTOP1Q7RTM1 612 aa19.87■□□□□ 0.77
SCAF11-206ENST00000474828 FAM160B2Q86V87 743 aa19.87■□□□□ 0.77
SCAF11-206ENST00000474828 ATG4CQ96DT6 458 aa19.87■□□□□ 0.77
SCAF11-206ENST00000474828 TRIM47Q96LD4 638 aa19.87■□□□□ 0.77
SCAF11-206ENST00000474828 LY9Q9HBG7 655 aa19.87■□□□□ 0.77
SCAF11-206ENST00000474828 ZNF214Q9UL59 606 aaPredicted RBP19.87■□□□□ 0.77
SCAF11-206ENST00000474828 SH2B2O14492 632 aaPredicted RBP19.86■□□□□ 0.77
SCAF11-206ENST00000474828 IFIT3O14879 490 aaKnown RBP19.86■□□□□ 0.77
SCAF11-206ENST00000474828 PRC1O43663 620 aa19.86■□□□□ 0.77
SCAF11-206ENST00000474828 STAT2P52630 851 aa19.86■□□□□ 0.77
SCAF11-206ENST00000474828 TROAPQ12815 778 aa19.86■□□□□ 0.77
SCAF11-206ENST00000474828 SART3Q15020 963 aaKnown RBP19.86■□□□□ 0.77
SCAF11-206ENST00000474828 PKN2Q16513 984 aaKnown RBP19.86■□□□□ 0.77
SCAF11-206ENST00000474828 GPATCH4Q5T3I0 446 aaKnown RBP19.86■□□□□ 0.77
SCAF11-206ENST00000474828 IFIT1BQ5T764 474 aaKnown RBP19.86■□□□□ 0.77
SCAF11-206ENST00000474828 DHX32Q7L7V1 743 aaKnown RBP19.86■□□□□ 0.77
SCAF11-206ENST00000474828 RASGRP2Q7LDG7 609 aa19.86■□□□□ 0.77
SCAF11-206ENST00000474828 SGMS1Q86VZ5 419 aa19.86■□□□□ 0.77
SCAF11-206ENST00000474828 SHCBP1Q8NEM2 672 aa19.86■□□□□ 0.77
SCAF11-206ENST00000474828 CHURC1Q8WUH1 139 aa19.86■□□□□ 0.77
SCAF11-206ENST00000474828 MAP3K14Q99558 947 aa19.86■□□□□ 0.77
SCAF11-206ENST00000474828 TM6SF1Q9BZW5 370 aa19.86■□□□□ 0.77
SCAF11-206ENST00000474828 ARHGAP39Q9C0H5 1083 aa19.86■□□□□ 0.77
SCAF11-206ENST00000474828 KAT14Q9H8E8 782 aa19.86■□□□□ 0.77
SCAF11-206ENST00000474828 SLC38A10Q9HBR0 1119 aa19.86■□□□□ 0.77
SCAF11-206ENST00000474828 OAZ1P54368 228 aa19.85■□□□□ 0.77
SCAF11-206ENST00000474828 PRMT2P55345 433 aa19.85■□□□□ 0.77
SCAF11-206ENST00000474828 KIF22Q14807 665 aa19.85■□□□□ 0.77
SCAF11-206ENST00000474828 TMEM132BQ14DG7 1078 aa19.85■□□□□ 0.77
SCAF11-206ENST00000474828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.85■□□□□ 0.77
SCAF11-206ENST00000474828 TMTC2Q8N394 836 aa19.85■□□□□ 0.77
SCAF11-206ENST00000474828 AGXT2Q9BYV1 514 aa19.85■□□□□ 0.77
SCAF11-206ENST00000474828 EFCC1Q9HA90 598 aa19.85■□□□□ 0.77
SCAF11-206ENST00000474828 SENP2Q9HC62 589 aa19.85■□□□□ 0.77
SCAF11-206ENST00000474828 TMEM232C9JQI7 657 aa19.84■□□□□ 0.77
SCAF11-206ENST00000474828 PEX10O60683 326 aa19.84■□□□□ 0.77
SCAF11-206ENST00000474828 SEC24BO95487 1268 aa19.84■□□□□ 0.77
SCAF11-206ENST00000474828 MAPK4P31152 587 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms