RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 KLHDC9Q8NEP7 349 aa8.43□□□□□ -1.06
HDAC3-206ENST00000471968 CFAP53Q96M91 514 aa8.43□□□□□ -1.06
HDAC3-206ENST00000471968 TGS1Q96RS0 853 aaKnown RBP8.43□□□□□ -1.06
HDAC3-206ENST00000471968 METTL22Q9BUU2 404 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-206ENST00000471968 NOC4LQ9BVI4 516 aaKnown RBP8.43□□□□□ -1.06
HDAC3-206ENST00000471968 OSBPL5Q9H0X9 879 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-206ENST00000471968 PHAXQ9H814 394 aaKnown RBP8.43□□□□□ -1.06
HDAC3-206ENST00000471968 OTOGLQ3ZCN5 2332 aa8.43□□□□□ -1.06
HDAC3-206ENST00000471968 NBEAQ8NFP9 2946 aa8.43□□□□□ -1.06
HDAC3-206ENST00000471968 ENTPD3O75355 529 aa8.42□□□□□ -1.06
HDAC3-206ENST00000471968 NEFMP07197 916 aa8.42□□□□□ -1.06
HDAC3-206ENST00000471968 ASGR1P07306 291 aa8.42□□□□□ -1.06
HDAC3-206ENST00000471968 PFKMP08237 780 aa8.42□□□□□ -1.06
HDAC3-206ENST00000471968 AKR1A1P14550 325 aa8.42□□□□□ -1.06
HDAC3-206ENST00000471968 TAL1P17542 331 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-206ENST00000471968 SDHBP21912 280 aa8.42□□□□□ -1.06
HDAC3-206ENST00000471968 ERVK-21P61565 698 aa8.42□□□□□ -1.06
HDAC3-206ENST00000471968 IRX5P78411 483 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-206ENST00000471968 SMAD4Q13485 552 aaKnown RBP8.42□□□□□ -1.06
HDAC3-206ENST00000471968 TIGD5Q53EQ6 642 aa8.42□□□□□ -1.06
HDAC3-206ENST00000471968 CCSAPQ6IQ19 270 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-206ENST00000471968 UBE3BQ7Z3V4 1068 aa8.42□□□□□ -1.06
HDAC3-206ENST00000471968 TMCO2Q7Z6W1 182 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-206ENST00000471968 RPAINQ86UA6 219 aa8.42□□□□□ -1.06
HDAC3-206ENST00000471968 CYP2W1Q8TAV3 490 aa8.42□□□□□ -1.06
HDAC3-206ENST00000471968 MRPL38Q96DV4 380 aaKnown RBP8.42□□□□□ -1.06
HDAC3-206ENST00000471968 SUGT1Q9Y2Z0 365 aa8.42□□□□□ -1.06
HDAC3-206ENST00000471968 SMCHD1A6NHR9 2005 aa8.41□□□□□ -1.06
HDAC3-206ENST00000471968 DLG5Q8TDM6 1919 aa8.41□□□□□ -1.06
HDAC3-206ENST00000471968 TNKSO95271 1327 aa8.41□□□□□ -1.06
HDAC3-206ENST00000471968 A0A1B0GUL7 405 aa8.41□□□□□ -1.06
HDAC3-206ENST00000471968 LOC730098B7Z3J9 87 aa8.41□□□□□ -1.06
HDAC3-206ENST00000471968 DLX2Q07687 328 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-206ENST00000471968 COL19A1Q14993 1142 aa8.41□□□□□ -1.06
HDAC3-206ENST00000471968 PTPROQ16827 1216 aa8.41□□□□□ -1.06
HDAC3-206ENST00000471968 RUBCNQ92622 972 aa8.41□□□□□ -1.06
HDAC3-206ENST00000471968 MAML3Q96JK9 1138 aa8.41□□□□□ -1.06
HDAC3-206ENST00000471968 HAUS7Q99871 368 aa8.41□□□□□ -1.06
HDAC3-206ENST00000471968 ZBED2Q9BTP6 218 aa8.41□□□□□ -1.06
HDAC3-206ENST00000471968 SLC5A4Q9NY91 659 aa8.41□□□□□ -1.06
HDAC3-206ENST00000471968 BTBD7Q9P203 1132 aa8.41□□□□□ -1.06
HDAC3-206ENST00000471968 CTNNA3Q9UI47 895 aa8.41□□□□□ -1.06
HDAC3-206ENST00000471968 LOC400499M0QZD8 3231 aa8.4□□□□□ -1.06
HDAC3-206ENST00000471968 ROBO3Q96MS0 1386 aa8.4□□□□□ -1.06
HDAC3-206ENST00000471968 IGKV5-2P06315 115 aa8.4□□□□□ -1.06
HDAC3-206ENST00000471968 CSF1RP07333 972 aa8.4□□□□□ -1.06
HDAC3-206ENST00000471968 CAP2P40123 477 aa8.4□□□□□ -1.06
HDAC3-206ENST00000471968 PICALMQ13492 652 aa8.4□□□□□ -1.06
HDAC3-206ENST00000471968 RRP1BQ14684 758 aaKnown RBP8.4□□□□□ -1.06
HDAC3-206ENST00000471968 FBXO22Q8NEZ5 403 aa8.4□□□□□ -1.06
HDAC3-206ENST00000471968 AGBL1Q96MI9 1066 aa8.4□□□□□ -1.06
HDAC3-206ENST00000471968 WDR18Q9BV38 432 aa8.4□□□□□ -1.06
HDAC3-206ENST00000471968 SEMA4AQ9H3S1 761 aa8.4□□□□□ -1.06
HDAC3-206ENST00000471968 NRBP1Q9UHY1 535 aa8.4□□□□□ -1.06
HDAC3-206ENST00000471968 CDV3Q9UKY7 258 aaKnown RBP8.4□□□□□ -1.06
HDAC3-206ENST00000471968 LINC01553A4QN01 128 aa8.39□□□□□ -1.07
HDAC3-206ENST00000471968 C19orf81C9J6K1 198 aa8.39□□□□□ -1.07
HDAC3-206ENST00000471968 USP17L10C9JJH3 530 aa8.39□□□□□ -1.07
HDAC3-206ENST00000471968 STRNO43815 780 aa8.39□□□□□ -1.07
HDAC3-206ENST00000471968 TBC1D12O60347 775 aa8.39□□□□□ -1.07
HDAC3-206ENST00000471968 C6orf222P0C671 652 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-206ENST00000471968 ZNF865P0CJ78 1059 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-206ENST00000471968 IFIT5Q13325 482 aaKnown RBP8.39□□□□□ -1.07
HDAC3-206ENST00000471968 UBE4AQ14139 1066 aa8.39□□□□□ -1.07
HDAC3-206ENST00000471968 CBX2Q14781 532 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-206ENST00000471968 ANGPT1Q15389 498 aa8.39□□□□□ -1.07
HDAC3-206ENST00000471968 PTPN21Q16825 1174 aa8.39□□□□□ -1.07
HDAC3-206ENST00000471968 CWF19L2Q2TBE0 894 aaKnown RBP8.39□□□□□ -1.07
HDAC3-206ENST00000471968 ASTLQ6HA08 431 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-206ENST00000471968 LRSAM1Q6UWE0 723 aa8.39□□□□□ -1.07
HDAC3-206ENST00000471968 FBXO33Q7Z6M2 555 aa8.39□□□□□ -1.07
HDAC3-206ENST00000471968 ZBTB33Q86T24 672 aa8.39□□□□□ -1.07
HDAC3-206ENST00000471968 CRIPAKQ8N1N5 446 aa8.39□□□□□ -1.07
HDAC3-206ENST00000471968 PCSK9Q8NBP7 692 aaKnown RBP8.39□□□□□ -1.07
HDAC3-206ENST00000471968 CDCA7LQ96GN5 454 aa8.39□□□□□ -1.07
HDAC3-206ENST00000471968 C17orf80Q9BSJ5 609 aa8.39□□□□□ -1.07
HDAC3-206ENST00000471968 IDI2Q9BXS1 227 aa8.39□□□□□ -1.07
HDAC3-206ENST00000471968 TRPV6Q9H1D0 765 aa8.39□□□□□ -1.07
HDAC3-206ENST00000471968 NSUN3Q9H649 340 aaKnown RBP8.39□□□□□ -1.07
HDAC3-206ENST00000471968 CNNM1Q9NRU3 951 aa8.39□□□□□ -1.07
HDAC3-206ENST00000471968 BABAM1Q9NWV8 329 aa8.39□□□□□ -1.07
HDAC3-206ENST00000471968 ANGPTL2Q9UKU9 493 aa8.39□□□□□ -1.07
HDAC3-206ENST00000471968 CHMP3Q9Y3E7 222 aa8.39□□□□□ -1.07
HDAC3-206ENST00000471968 R4GN57 208 aa8.39□□□□□ -1.07
HDAC3-206ENST00000471968 KIF16BQ96L93 1317 aa8.38□□□□□ -1.07
HDAC3-206ENST00000471968 B4GALT4O60513 344 aa8.38□□□□□ -1.07
HDAC3-206ENST00000471968 ICAM3P32942 547 aa8.38□□□□□ -1.07
HDAC3-206ENST00000471968 KCNJ6P48051 423 aa8.38□□□□□ -1.07
HDAC3-206ENST00000471968 PPM1JQ5JR12 505 aa8.38□□□□□ -1.07
HDAC3-206ENST00000471968 LDHAL6AQ6ZMR3 332 aa8.38□□□□□ -1.07
HDAC3-206ENST00000471968 ZNF594Q96JF6 807 aaPredicted RBP8.38□□□□□ -1.07
HDAC3-206ENST00000471968 RPGRIP1Q96KN7 1286 aa8.38□□□□□ -1.07
HDAC3-206ENST00000471968 CRBNQ96SW2 442 aa8.38□□□□□ -1.07
HDAC3-206ENST00000471968 PLA2G12BQ9BX93 195 aa8.38□□□□□ -1.07
HDAC3-206ENST00000471968 FTOQ9C0B1 505 aaKnown RBP eCLIP8.38□□□□□ -1.07
HDAC3-206ENST00000471968 DDX4Q9NQI0 724 aaKnown RBP8.38□□□□□ -1.07
HDAC3-206ENST00000471968 EMILIN3Q9NT22 766 aa8.38□□□□□ -1.07
HDAC3-206ENST00000471968 CD207Q9UJ71 328 aa8.38□□□□□ -1.07
HDAC3-206ENST00000471968 ZMIZ1Q9ULJ6 1067 aa8.38□□□□□ -1.07
HDAC3-206ENST00000471968 MAP3K2Q9Y2U5 619 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms