RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 PSMC4P43686 418 aa23.25■■□□□ 1.31
HDAC7-220ENST00000471235 ERVK-9P63128 1117 aa23.25■■□□□ 1.31
HDAC7-220ENST00000471235 ERVK-24P63145 666 aa23.25■■□□□ 1.31
HDAC7-220ENST00000471235 RALYLQ86SE5 291 aaKnown RBP23.25■■□□□ 1.31
HDAC7-220ENST00000471235 NCOA7Q8NI08 942 aa23.25■■□□□ 1.31
HDAC7-220ENST00000471235 ATG4CQ96DT6 458 aa23.25■■□□□ 1.31
HDAC7-220ENST00000471235 GMCL1Q96IK5 515 aa23.25■■□□□ 1.31
HDAC7-220ENST00000471235 TRIM47Q96LD4 638 aa23.25■■□□□ 1.31
HDAC7-220ENST00000471235 ZSCAN10Q96SZ4 725 aaPredicted RBP23.25■■□□□ 1.31
HDAC7-220ENST00000471235 MCOLN1Q9GZU1 580 aa23.25■■□□□ 1.31
HDAC7-220ENST00000471235 TNKSO95271 1327 aa23.25■■□□□ 1.31
HDAC7-220ENST00000471235 CCDC178Q5BJE1 867 aa23.24■■□□□ 1.31
HDAC7-220ENST00000471235 SAMD1Q6SPF0 538 aaPredicted RBP23.24■■□□□ 1.31
HDAC7-220ENST00000471235 MB21D2Q8IYB1 491 aaPredicted RBP23.24■■□□□ 1.31
HDAC7-220ENST00000471235 TNS4Q8IZW8 715 aa23.24■■□□□ 1.31
HDAC7-220ENST00000471235 ENAHQ8N8S7 591 aaPredicted RBP23.24■■□□□ 1.31
HDAC7-220ENST00000471235 TTC14Q96N46 770 aa23.24■■□□□ 1.31
HDAC7-220ENST00000471235 BTBD7Q9P203 1132 aa23.24■■□□□ 1.31
HDAC7-220ENST00000471235 PPP1R9AQ9ULJ8 1098 aa23.24■■□□□ 1.31
HDAC7-220ENST00000471235 RABGAP1Q9Y3P9 1069 aa23.24■■□□□ 1.31
HDAC7-220ENST00000471235 PLXNA1Q9UIW2 1896 aa23.24■■□□□ 1.31
HDAC7-220ENST00000471235 BMP3P12645 472 aa23.23■■□□□ 1.31
HDAC7-220ENST00000471235 FCGRTP55899 365 aa23.23■■□□□ 1.31
HDAC7-220ENST00000471235 DGKHQ86XP1 1220 aa23.23■■□□□ 1.31
HDAC7-220ENST00000471235 GPRC5AQ8NFJ5 357 aa23.23■■□□□ 1.31
HDAC7-220ENST00000471235 CHMP4CQ96CF2 233 aa23.23■■□□□ 1.31
HDAC7-220ENST00000471235 UBAC1Q9BSL1 405 aa23.23■■□□□ 1.31
HDAC7-220ENST00000471235 HOXC10Q9NYD6 342 aa23.23■■□□□ 1.31
HDAC7-220ENST00000471235 MTMR7Q9Y216 660 aa23.23■■□□□ 1.31
HDAC7-220ENST00000471235 SMCHD1A6NHR9 2005 aa23.22■■□□□ 1.31
HDAC7-220ENST00000471235 REC8O95072 547 aa23.22■■□□□ 1.31
HDAC7-220ENST00000471235 FMNL1O95466 1100 aaPredicted RBP23.22■■□□□ 1.31
HDAC7-220ENST00000471235 MCCP23508 829 aa23.22■■□□□ 1.31
HDAC7-220ENST00000471235 SLC1A4P43007 532 aa23.22■■□□□ 1.31
HDAC7-220ENST00000471235 ARHGEF6Q15052 776 aa23.22■■□□□ 1.31
HDAC7-220ENST00000471235 SEC23AQ15436 765 aa23.22■■□□□ 1.31
HDAC7-220ENST00000471235 RNF20Q5VTR2 975 aa23.22■■□□□ 1.31
HDAC7-220ENST00000471235 ANKS1AQ92625 1134 aa23.22■■□□□ 1.31
HDAC7-220ENST00000471235 SLF1Q9BQI6 1058 aa23.22■■□□□ 1.31
HDAC7-220ENST00000471235 ANTXR2P58335 489 aa23.21■■□□□ 1.31
HDAC7-220ENST00000471235 PKN2Q16513 984 aaKnown RBP23.21■■□□□ 1.31
HDAC7-220ENST00000471235 Q3C1V9 767 aa23.21■■□□□ 1.31
HDAC7-220ENST00000471235 DCAF4Q8WV16 495 aa23.21■■□□□ 1.31
HDAC7-220ENST00000471235 FEM1BQ9UK73 627 aa23.21■■□□□ 1.31
HDAC7-220ENST00000471235 ISY1Q9ULR0 285 aaKnown RBP23.21■■□□□ 1.31
HDAC7-220ENST00000471235 ADAMTS5Q9UNA0 930 aa23.21■■□□□ 1.31
HDAC7-220ENST00000471235 RBBP6Q7Z6E9 1792 aaKnown RBP23.2■■□□□ 1.3
HDAC7-220ENST00000471235 GNRH1P01148 92 aa23.2■■□□□ 1.3
HDAC7-220ENST00000471235 COL9A3Q14050 684 aaPredicted RBP23.2■■□□□ 1.3
HDAC7-220ENST00000471235 CCDC96Q2M329 555 aa23.2■■□□□ 1.3
HDAC7-220ENST00000471235 FBXO46Q6PJ61 603 aaPredicted RBP23.2■■□□□ 1.3
HDAC7-220ENST00000471235 KCTD1Q719H9 257 aa23.2■■□□□ 1.3
HDAC7-220ENST00000471235 MB21D1Q8N884 522 aa23.2■■□□□ 1.3
HDAC7-220ENST00000471235 PORCNQ9H237 461 aa23.2■■□□□ 1.3
HDAC7-220ENST00000471235 PTPN22Q9Y2R2 807 aa23.2■■□□□ 1.3
HDAC7-220ENST00000471235 TNPO2O14787 897 aaKnown RBP23.19■■□□□ 1.3
HDAC7-220ENST00000471235 PDHBP11177 359 aa23.19■■□□□ 1.3
HDAC7-220ENST00000471235 CHST3Q7LGC8 479 aa23.19■■□□□ 1.3
HDAC7-220ENST00000471235 RASEFQ8IZ41 740 aa23.19■■□□□ 1.3
HDAC7-220ENST00000471235 PNMA1Q8ND90 353 aa23.19■■□□□ 1.3
HDAC7-220ENST00000471235 REPS2Q8NFH8 660 aa23.19■■□□□ 1.3
HDAC7-220ENST00000471235 KAT14Q9H8E8 782 aa23.19■■□□□ 1.3
HDAC7-220ENST00000471235 HTTP42858 3142 aa23.19■■□□□ 1.3
HDAC7-220ENST00000471235 TMEM232C9JQI7 657 aa23.18■■□□□ 1.3
HDAC7-220ENST00000471235 VWA5AO00534 786 aa23.18■■□□□ 1.3
HDAC7-220ENST00000471235 HSPA4P34932 840 aa23.18■■□□□ 1.3
HDAC7-220ENST00000471235 STAT2P52630 851 aa23.18■■□□□ 1.3
HDAC7-220ENST00000471235 IFIT1BQ5T764 474 aaKnown RBP23.18■■□□□ 1.3
HDAC7-220ENST00000471235 KCNB2Q92953 911 aa23.18■■□□□ 1.3
HDAC7-220ENST00000471235 KIFC2Q96AC6 838 aa23.18■■□□□ 1.3
HDAC7-220ENST00000471235 SRRDQ9UH36 339 aa23.18■■□□□ 1.3
HDAC7-220ENST00000471235 FRMPD2Q68DX3 1309 aaPredicted RBP23.17■■□□□ 1.3
HDAC7-220ENST00000471235 IFIT3O14879 490 aaKnown RBP23.17■■□□□ 1.3
HDAC7-220ENST00000471235 SNHG28P0DPA3 235 aa23.17■■□□□ 1.3
HDAC7-220ENST00000471235 PRMT2P55345 433 aa23.17■■□□□ 1.3
HDAC7-220ENST00000471235 CCNA1P78396 465 aa23.17■■□□□ 1.3
HDAC7-220ENST00000471235 PRKCZQ05513 592 aa23.17■■□□□ 1.3
HDAC7-220ENST00000471235 TMEM132BQ14DG7 1078 aa23.17■■□□□ 1.3
HDAC7-220ENST00000471235 TSGA10IPQ3SY00 556 aa23.17■■□□□ 1.3
HDAC7-220ENST00000471235 FAM160B2Q86V87 743 aa23.17■■□□□ 1.3
HDAC7-220ENST00000471235 PRPF38AQ8NAV1 312 aaKnown RBP23.17■■□□□ 1.3
HDAC7-220ENST00000471235 SPATC1LQ9H0A9 340 aa23.17■■□□□ 1.3
HDAC7-220ENST00000471235 GABRQQ9UN88 632 aa23.17■■□□□ 1.3
HDAC7-220ENST00000471235 PTCH2Q9Y6C5 1203 aa23.17■■□□□ 1.3
HDAC7-220ENST00000471235 EPB41L2O43491 1005 aaKnown RBP23.16■■□□□ 1.3
HDAC7-220ENST00000471235 PRC1O43663 620 aa23.16■■□□□ 1.3
HDAC7-220ENST00000471235 PLA2G6O60733 806 aa23.16■■□□□ 1.3
HDAC7-220ENST00000471235 HOXD10P28358 340 aa23.16■■□□□ 1.3
HDAC7-220ENST00000471235 MAPK4P31152 587 aa23.16■■□□□ 1.3
HDAC7-220ENST00000471235 IKQ13123 557 aaPredicted RBP23.16■■□□□ 1.3
HDAC7-220ENST00000471235 COA7Q96BR5 231 aa23.16■■□□□ 1.3
HDAC7-220ENST00000471235 MOV10L1Q9BXT6 1211 aaKnown RBP23.16■■□□□ 1.3
HDAC7-220ENST00000471235 SENP2Q9HC62 589 aa23.16■■□□□ 1.3
HDAC7-220ENST00000471235 ZNF214Q9UL59 606 aaPredicted RBP23.16■■□□□ 1.3
HDAC7-220ENST00000471235 ERICH2A1L162 156 aa23.15■■□□□ 1.3
HDAC7-220ENST00000471235 ZKSCAN1P17029 563 aaPredicted RBP23.15■■□□□ 1.3
HDAC7-220ENST00000471235 MCM5P33992 734 aa23.15■■□□□ 1.3
HDAC7-220ENST00000471235 ZNF543Q08ER8 600 aa23.15■■□□□ 1.3
HDAC7-220ENST00000471235 PLS1Q14651 629 aa23.15■■□□□ 1.3
HDAC7-220ENST00000471235 WTAPQ15007 396 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms