RNA–Protein interactions for RNA: ENST00000470985.3

LDHB-206, Transcript of lactate dehydrogenase B, humanhuman

TSL 1 (best)

Gene LDHB, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-206ENST00000470985 ELOA3BQ3SY89 546 aa9.34□□□□□ -0.91
LDHB-206ENST00000470985 TSEN2Q8NCE0 465 aaKnown RBP9.34□□□□□ -0.91
LDHB-206ENST00000470985 ELOA3Q8NG57 546 aa9.34□□□□□ -0.91
LDHB-206ENST00000470985 TEX13AQ9BXU3 409 aaPredicted RBP9.34□□□□□ -0.91
LDHB-206ENST00000470985 MYPNQ86TC9 1320 aa9.33□□□□□ -0.92
LDHB-206ENST00000470985 C5orf42Q9H799 3197 aa9.33□□□□□ -0.92
LDHB-206ENST00000470985 MRPS5P82675 430 aaKnown RBP9.33□□□□□ -0.92
LDHB-206ENST00000470985 KIF22Q14807 665 aa9.33□□□□□ -0.92
LDHB-206ENST00000470985 FCHSD1Q86WN1 690 aa9.33□□□□□ -0.92
LDHB-206ENST00000470985 PHACTR1Q9C0D0 580 aa9.33□□□□□ -0.92
LDHB-206ENST00000470985 KIAA1024Q9UPX6 916 aa9.33□□□□□ -0.92
LDHB-206ENST00000470985 USP16Q9Y5T5 823 aa9.33□□□□□ -0.92
LDHB-206ENST00000470985 CHD8Q9HCK8 2581 aa9.33□□□□□ -0.92
LDHB-206ENST00000470985 KCNQ3O43525 872 aa9.32□□□□□ -0.92
LDHB-206ENST00000470985 SIN3BO75182 1162 aa9.32□□□□□ -0.92
LDHB-206ENST00000470985 GPTP24298 496 aa9.32□□□□□ -0.92
LDHB-206ENST00000470985 PRKCZQ05513 592 aa9.32□□□□□ -0.92
LDHB-206ENST00000470985 MAP3K11Q16584 847 aa9.32□□□□□ -0.92
LDHB-206ENST00000470985 SUSD4Q5VX71 490 aa9.32□□□□□ -0.92
LDHB-206ENST00000470985 SULT6B1Q6IMI4 303 aa9.32□□□□□ -0.92
LDHB-206ENST00000470985 ZNF790Q6PG37 636 aa9.32□□□□□ -0.92
LDHB-206ENST00000470985 SCG3Q8WXD2 468 aaKnown RBP9.32□□□□□ -0.92
LDHB-206ENST00000470985 GMLQ99445 158 aa9.32□□□□□ -0.92
LDHB-206ENST00000470985 VRTNQ9H8Y1 702 aa9.32□□□□□ -0.92
LDHB-206ENST00000470985 BRD7Q9NPI1 651 aa9.32□□□□□ -0.92
LDHB-206ENST00000470985 DDX60Q8IY21 1712 aaKnown RBP9.31□□□□□ -0.92
LDHB-206ENST00000470985 KRBA1A5PL33 1030 aa9.31□□□□□ -0.92
LDHB-206ENST00000470985 TLR2O60603 784 aa9.31□□□□□ -0.92
LDHB-206ENST00000470985 SASH1O94885 1247 aa9.31□□□□□ -0.92
LDHB-206ENST00000470985 NTSR2O95665 410 aa9.31□□□□□ -0.92
LDHB-206ENST00000470985 PSMC4P43686 418 aa9.31□□□□□ -0.92
LDHB-206ENST00000470985 DGKGP49619 791 aa9.31□□□□□ -0.92
LDHB-206ENST00000470985 PRRT3Q5FWE3 981 aa9.31□□□□□ -0.92
LDHB-206ENST00000470985 PAK6Q9NQU5 681 aaPredicted RBP9.31□□□□□ -0.92
LDHB-206ENST00000470985 POLLQ9UGP5 575 aa9.31□□□□□ -0.92
LDHB-206ENST00000470985 KCNH4Q9UQ05 1017 aa9.31□□□□□ -0.92
LDHB-206ENST00000470985 IBTKQ9P2D0 1353 aaPredicted RBP9.31□□□□□ -0.92
LDHB-206ENST00000470985 EPG5Q9HCE0 2579 aa9.3□□□□□ -0.92
LDHB-206ENST00000470985 TCF20Q9UGU0 1960 aaKnown RBP9.3□□□□□ -0.92
LDHB-206ENST00000470985 COL3A1P02461 1466 aaPredicted RBP9.3□□□□□ -0.92
LDHB-206ENST00000470985 CCL15-CCL14A0A0B4J2E2 113 aa9.3□□□□□ -0.92
LDHB-206ENST00000470985 A6NJR5 290 aa9.3□□□□□ -0.92
LDHB-206ENST00000470985 WNT10BO00744 389 aa9.3□□□□□ -0.92
LDHB-206ENST00000470985 BBOX1O75936 387 aa9.3□□□□□ -0.92
LDHB-206ENST00000470985 ELNP15502 786 aa9.3□□□□□ -0.92
LDHB-206ENST00000470985 SPEM2Q0P670 501 aa9.3□□□□□ -0.92
LDHB-206ENST00000470985 CCL15Q16663 113 aa9.3□□□□□ -0.92
LDHB-206ENST00000470985 STAG2Q8N3U4 1231 aa9.3□□□□□ -0.92
LDHB-206ENST00000470985 AGBL3Q8NEM8 1001 aa9.3□□□□□ -0.92
LDHB-206ENST00000470985 VTI1AQ96AJ9 217 aa9.3□□□□□ -0.92
LDHB-206ENST00000470985 TESK2Q96S53 571 aa9.3□□□□□ -0.92
LDHB-206ENST00000470985 PPP1R12CQ9BZL4 782 aa9.3□□□□□ -0.92
LDHB-206ENST00000470985 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.3□□□□□ -0.921e-7■□□□□ 11.3
LDHB-206ENST00000470985 KLF15Q9UIH9 416 aa9.3□□□□□ -0.92
LDHB-206ENST00000470985 MAFBQ9Y5Q3 323 aaPredicted RBP9.3□□□□□ -0.92
LDHB-206ENST00000470985 LRRC37AA6NMS7 1700 aa9.3□□□□□ -0.92
LDHB-206ENST00000470985 ADGRA2Q96PE1 1338 aa9.3□□□□□ -0.92
LDHB-206ENST00000470985 COL8A1P27658 744 aa9.29□□□□□ -0.92
LDHB-206ENST00000470985 SFSWAPQ12872 951 aaKnown RBP9.29□□□□□ -0.92
LDHB-206ENST00000470985 C9orf50Q5SZB4 431 aa9.29□□□□□ -0.92
LDHB-206ENST00000470985 ALDH16A1Q8IZ83 802 aa9.29□□□□□ -0.92
LDHB-206ENST00000470985 OPTNQ96CV9 577 aa9.29□□□□□ -0.92
LDHB-206ENST00000470985 SUSD3Q96L08 255 aa9.29□□□□□ -0.92
LDHB-206ENST00000470985 FMNL2Q96PY5 1086 aa9.29□□□□□ -0.92
LDHB-206ENST00000470985 PLVAPQ9BX97 442 aa9.29□□□□□ -0.92
LDHB-206ENST00000470985 CARD11Q9BXL7 1154 aa9.29□□□□□ -0.92
LDHB-206ENST00000470985 SUV39H2Q9H5I1 410 aa9.29□□□□□ -0.92
LDHB-206ENST00000470985 ELP3Q9H9T3 547 aa9.29□□□□□ -0.92
LDHB-206ENST00000470985 GABRQQ9UN88 632 aa9.29□□□□□ -0.92
LDHB-206ENST00000470985 PFASO15067 1338 aa9.29□□□□□ -0.92
LDHB-206ENST00000470985 DDX60LQ5H9U9 1706 aaKnown RBP9.28□□□□□ -0.92
LDHB-206ENST00000470985 SMIM22K7EJ46 135 aa9.28□□□□□ -0.92
LDHB-206ENST00000470985 SHHQ15465 462 aa9.28□□□□□ -0.92
LDHB-206ENST00000470985 SH3PXD2AQ5TCZ1 1133 aa9.28□□□□□ -0.92
LDHB-206ENST00000470985 PNMA5Q96PV4 448 aa9.28□□□□□ -0.92
LDHB-206ENST00000470985 C11orf49Q9H6J7 331 aa9.28□□□□□ -0.92
LDHB-206ENST00000470985 CPA4Q9UI42 421 aa9.28□□□□□ -0.92
LDHB-206ENST00000470985 SPTBN4Q9H254 2564 aa9.28□□□□□ -0.92
LDHB-206ENST00000470985 COL4A1P02462 1669 aa9.28□□□□□ -0.92
LDHB-206ENST00000470985 DCHS1Q96JQ0 3298 aa9.28□□□□□ -0.92
LDHB-206ENST00000470985 ADARB2-AS1A8MUL3 147 aa9.27□□□□□ -0.93
LDHB-206ENST00000470985 GPSM2P81274 684 aa9.27□□□□□ -0.93
LDHB-206ENST00000470985 GRAPQ13588 217 aa9.27□□□□□ -0.93
LDHB-206ENST00000470985 GRAPLQ8TC17 118 aaPredicted RBP9.27□□□□□ -0.93
LDHB-206ENST00000470985 FBXL18Q96ME1 805 aa9.27□□□□□ -0.93
LDHB-206ENST00000470985 MXD3Q9BW11 206 aa9.27□□□□□ -0.93
LDHB-206ENST00000470985 OTOFQ9HC10 1997 aa9.26□□□□□ -0.93
LDHB-206ENST00000470985 ADCY3O60266 1144 aa9.26□□□□□ -0.93
LDHB-206ENST00000470985 SPATA31C1P0DKV0 1188 aa9.26□□□□□ -0.93
LDHB-206ENST00000470985 EPB42P16452 691 aa9.26□□□□□ -0.93
LDHB-206ENST00000470985 HOXD10P28358 340 aa9.26□□□□□ -0.93
LDHB-206ENST00000470985 SMAD3P84022 425 aaKnown RBP9.26□□□□□ -0.93
LDHB-206ENST00000470985 CCDC85BQ15834 202 aaPredicted RBP9.26□□□□□ -0.93
LDHB-206ENST00000470985 MTHFSDQ2M296 383 aaKnown RBP9.26□□□□□ -0.93
LDHB-206ENST00000470985 C17orf99Q6UX52 265 aa9.26□□□□□ -0.93
LDHB-206ENST00000470985 APOBEC3FQ8IUX4 373 aaKnown RBP9.26□□□□□ -0.93
LDHB-206ENST00000470985 ZBTB38Q8NAP3 1195 aaPredicted RBP9.26□□□□□ -0.93
LDHB-206ENST00000470985 HSH2DQ96JZ2 352 aa9.26□□□□□ -0.93
LDHB-206ENST00000470985 ARID3AQ99856 593 aa9.26□□□□□ -0.93
LDHB-206ENST00000470985 C2orf49Q9BVC5 232 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms