RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 NDUFAB1O14561 156 aa15.46■□□□□ 0.06
NPHP4-207ENST00000470763 COPB1P53618 953 aaKnown RBP15.46■□□□□ 0.06
NPHP4-207ENST00000470763 HERVK_113P62684 666 aa15.46■□□□□ 0.06
NPHP4-207ENST00000470763 RILPL1Q5EBL4 403 aa15.46■□□□□ 0.06
NPHP4-207ENST00000470763 CNPY4Q8N129 248 aa15.46■□□□□ 0.06
NPHP4-207ENST00000470763 FAM212AQ96EL1 285 aa15.46■□□□□ 0.06
NPHP4-207ENST00000470763 A0A0G2JS52 829 aa15.45■□□□□ 0.06
NPHP4-207ENST00000470763 ATP1A2P50993 1020 aa15.45■□□□□ 0.06
NPHP4-207ENST00000470763 XAGE2Q96GT9 111 aa15.45■□□□□ 0.06
NPHP4-207ENST00000470763 LY9Q9HBG7 655 aa15.45■□□□□ 0.06
NPHP4-207ENST00000470763 JADE2Q9NQC1 790 aa15.45■□□□□ 0.06
NPHP4-207ENST00000470763 NFAT5O94916 1531 aa15.45■□□□□ 0.06
NPHP4-207ENST00000470763 WDR19Q8NEZ3 1342 aa15.45■□□□□ 0.06
NPHP4-207ENST00000470763 ZFYP08048 801 aaPredicted RBP15.45■□□□□ 0.06
NPHP4-207ENST00000470763 EVA1CP58658 441 aa15.45■□□□□ 0.06
NPHP4-207ENST00000470763 UBXN1Q04323 297 aa15.45■□□□□ 0.06
NPHP4-207ENST00000470763 PPARAQ07869 468 aa15.45■□□□□ 0.06
NPHP4-207ENST00000470763 IGDCC4Q8TDY8 1250 aa15.45■□□□□ 0.06
NPHP4-207ENST00000470763 ARL8AQ96BM9 186 aa15.45■□□□□ 0.06
NPHP4-207ENST00000470763 HAUS4Q9H6D7 363 aa15.45■□□□□ 0.06
NPHP4-207ENST00000470763 CD248Q9HCU0 757 aa15.45■□□□□ 0.06
NPHP4-207ENST00000470763 CEP126Q9P2H0 1117 aa15.45■□□□□ 0.06
NPHP4-207ENST00000470763 SLC12A7Q9Y666 1083 aa15.45■□□□□ 0.06
NPHP4-207ENST00000470763 TTC26A0AVF1 554 aa15.44■□□□□ 0.06
NPHP4-207ENST00000470763 MATR3P43243 847 aaKnown RBP eCLIP15.44■□□□□ 0.06
NPHP4-207ENST00000470763 FAM182BQ5T319 152 aa15.44■□□□□ 0.06
NPHP4-207ENST00000470763 KIAA1328Q86T90 577 aa15.44■□□□□ 0.06
NPHP4-207ENST00000470763 PRPF38AQ8NAV1 312 aaKnown RBP15.44■□□□□ 0.06
NPHP4-207ENST00000470763 DONSONQ9NYP3 566 aa15.44■□□□□ 0.06
NPHP4-207ENST00000470763 DUSP10Q9Y6W6 482 aa15.44■□□□□ 0.06
NPHP4-207ENST00000470763 ZEB2O60315 1214 aa15.44■□□□□ 0.06
NPHP4-207ENST00000470763 RRAGBQ5VZM2 374 aa15.44■□□□□ 0.06
NPHP4-207ENST00000470763 KCTD16Q68DU8 428 aa15.44■□□□□ 0.06
NPHP4-207ENST00000470763 SH2D3CQ8N5H7 860 aa15.44■□□□□ 0.06
NPHP4-207ENST00000470763 SYMPKQ92797 1274 aaKnown RBP15.44■□□□□ 0.06
NPHP4-207ENST00000470763 CABS1Q96KC9 395 aa15.44■□□□□ 0.06
NPHP4-207ENST00000470763 FAM184BQ9ULE4 1060 aa15.44■□□□□ 0.06
NPHP4-207ENST00000470763 MACROD2A1Z1Q3 448 aa15.44■□□□□ 0.06
NPHP4-207ENST00000470763 SETQ01105 290 aaPredicted RBP15.44■□□□□ 0.06
NPHP4-207ENST00000470763 SLC7A5Q01650 507 aa15.44■□□□□ 0.06
NPHP4-207ENST00000470763 CKAP4Q07065 602 aaKnown RBP15.44■□□□□ 0.06
NPHP4-207ENST00000470763 PAPD7Q5XG87 772 aaKnown RBP15.44■□□□□ 0.06
NPHP4-207ENST00000470763 GBP6Q6ZN66 633 aa15.44■□□□□ 0.06
NPHP4-207ENST00000470763 OTUD6BQ8N6M0 293 aa15.44■□□□□ 0.06
NPHP4-207ENST00000470763 AENQ8WTP8 325 aaKnown RBP15.44■□□□□ 0.06
NPHP4-207ENST00000470763 ZKSCAN3Q9BRR0 538 aa15.44■□□□□ 0.06
NPHP4-207ENST00000470763 LACRTQ9GZZ8 138 aa15.44■□□□□ 0.06
NPHP4-207ENST00000470763 VPS54Q9P1Q0 977 aa15.44■□□□□ 0.06
NPHP4-207ENST00000470763 DMGDHQ9UI17 866 aaKnown RBP15.44■□□□□ 0.06
NPHP4-207ENST00000470763 SIPA1L3O60292 1781 aaPredicted RBP15.44■□□□□ 0.06
NPHP4-207ENST00000470763 RCCD1A6NED2 376 aa15.43■□□□□ 0.06
NPHP4-207ENST00000470763 KIAA0754O94854 1291 aa15.43■□□□□ 0.06
NPHP4-207ENST00000470763 FMNL1O95466 1100 aaPredicted RBP15.43■□□□□ 0.06
NPHP4-207ENST00000470763 ZNF579Q8NAF0 562 aaKnown RBP15.43■□□□□ 0.06
NPHP4-207ENST00000470763 SLC52A2Q9HAB3 445 aa15.43■□□□□ 0.06
NPHP4-207ENST00000470763 USP54Q70EL1 1684 aa15.43■□□□□ 0.06
NPHP4-207ENST00000470763 CCDC196A0A1B0GTZ2 297 aa15.43■□□□□ 0.06
NPHP4-207ENST00000470763 KCNJ18B7U540 433 aa15.43■□□□□ 0.06
NPHP4-207ENST00000470763 IFIT3O14879 490 aaKnown RBP15.43■□□□□ 0.06
NPHP4-207ENST00000470763 IDEP14735 1019 aa15.43■□□□□ 0.06
NPHP4-207ENST00000470763 KCNJ12Q14500 433 aa15.43■□□□□ 0.06
NPHP4-207ENST00000470763 TTMPQ5BVD1 217 aa15.43■□□□□ 0.06
NPHP4-207ENST00000470763 CCDC125Q86Z20 511 aa15.43■□□□□ 0.06
NPHP4-207ENST00000470763 SEMA3EO15041 775 aa15.42■□□□□ 0.06
NPHP4-207ENST00000470763 TTF1Q15361 905 aaPredicted RBP15.42■□□□□ 0.06
NPHP4-207ENST00000470763 TSEN2Q8NCE0 465 aaKnown RBP15.42■□□□□ 0.06
NPHP4-207ENST00000470763 SH3GL2Q99962 352 aa15.42■□□□□ 0.06
NPHP4-207ENST00000470763 LIMA1Q9UHB6 759 aaKnown RBP15.42■□□□□ 0.06
NPHP4-207ENST00000470763 KDM6AO15550 1401 aaPredicted RBP15.42■□□□□ 0.06
NPHP4-207ENST00000470763 ARFGEF2Q9Y6D5 1785 aa15.42■□□□□ 0.06
NPHP4-207ENST00000470763 TDO2P48775 406 aa15.42■□□□□ 0.06
NPHP4-207ENST00000470763 PPARDQ03181 441 aa15.42■□□□□ 0.06
NPHP4-207ENST00000470763 TCP11X2Q5H9J9 407 aa15.42■□□□□ 0.06
NPHP4-207ENST00000470763 KCNH5Q8NCM2 988 aa15.42■□□□□ 0.06
NPHP4-207ENST00000470763 LRRC1Q9BTT6 524 aa15.42■□□□□ 0.06
NPHP4-207ENST00000470763 H7C1W4 665 aa15.42■□□□□ 0.06
NPHP4-207ENST00000470763 CTDSPL2Q05D32 466 aa15.42■□□□□ 0.06
NPHP4-207ENST00000470763 BARGINQ6ZT62 677 aa15.42■□□□□ 0.06
NPHP4-207ENST00000470763 OR8K1Q8NGG5 319 aa15.42■□□□□ 0.06
NPHP4-207ENST00000470763 GSDMAQ96QA5 445 aa15.42■□□□□ 0.06
NPHP4-207ENST00000470763 RUFY1Q96T51 708 aa15.42■□□□□ 0.06
NPHP4-207ENST00000470763 PSMB7Q99436 277 aa15.42■□□□□ 0.06
NPHP4-207ENST00000470763 FOXP1Q9H334 677 aaPredicted RBP15.42■□□□□ 0.06
NPHP4-207ENST00000470763 SNRPA1P09661 255 aaKnown RBP15.41■□□□□ 0.06
NPHP4-207ENST00000470763 FNTAP49354 379 aa15.41■□□□□ 0.06
NPHP4-207ENST00000470763 ATP2B2Q01814 1243 aa15.41■□□□□ 0.06
NPHP4-207ENST00000470763 RRP12Q5JTH9 1297 aaKnown RBP15.41■□□□□ 0.06
NPHP4-207ENST00000470763 TRIM22Q8IYM9 498 aa15.41■□□□□ 0.06
NPHP4-207ENST00000470763 TTC5Q8N0Z6 440 aa15.41■□□□□ 0.06
NPHP4-207ENST00000470763 TMEM87BQ96K49 555 aa15.41■□□□□ 0.06
NPHP4-207ENST00000470763 RPGRIP1Q96KN7 1286 aa15.41■□□□□ 0.06
NPHP4-207ENST00000470763 SMARCAL1Q9NZC9 954 aa15.41■□□□□ 0.06
NPHP4-207ENST00000470763 RGPD5Q99666 1765 aa15.41■□□□□ 0.06
NPHP4-207ENST00000470763 GOLGA8KD6RF30 607 aa15.41■□□□□ 0.06
NPHP4-207ENST00000470763 CYP27A1Q02318 531 aa15.41■□□□□ 0.06
NPHP4-207ENST00000470763 WDR59Q6PJI9 974 aa15.41■□□□□ 0.06
NPHP4-207ENST00000470763 SH3RF1Q7Z6J0 888 aa15.41■□□□□ 0.06
NPHP4-207ENST00000470763 TICAM2Q86XR7 235 aa15.41■□□□□ 0.06
NPHP4-207ENST00000470763 PLBD2Q8NHP8 589 aa15.41■□□□□ 0.06
NPHP4-207ENST00000470763 SMCR8Q8TEV9 937 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms