RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 PARP3Q9Y6F1 533 aa18.6■□□□□ 0.57
HOXB3-205ENST00000470495 USP17L3A6NCW0 530 aa18.6■□□□□ 0.57
HOXB3-205ENST00000470495 USP17L4A6NCW7 530 aa18.6■□□□□ 0.57
HOXB3-205ENST00000470495 WDHD1O75717 1129 aaPredicted RBP18.6■□□□□ 0.57
HOXB3-205ENST00000470495 IVLP07476 585 aa18.6■□□□□ 0.57
HOXB3-205ENST00000470495 USP17L1Q7RTZ2 530 aa18.6■□□□□ 0.57
HOXB3-205ENST00000470495 SLC44A5Q8NCS7 719 aa18.6■□□□□ 0.57
HOXB3-205ENST00000470495 CCDC148Q8NFR7 591 aa18.6■□□□□ 0.57
HOXB3-205ENST00000470495 SH3RF3Q8TEJ3 882 aaPredicted RBP18.6■□□□□ 0.57
HOXB3-205ENST00000470495 BRIP1Q9BX63 1249 aa18.6■□□□□ 0.57
HOXB3-205ENST00000470495 MAGEC2Q9UBF1 373 aaPredicted RBP18.6■□□□□ 0.57
HOXB3-205ENST00000470495 SMIM22K7EJ46 135 aa18.59■□□□□ 0.57
HOXB3-205ENST00000470495 STAT6P42226 847 aa18.59■□□□□ 0.57
HOXB3-205ENST00000470495 SCNN1DP51172 638 aa18.59■□□□□ 0.57
HOXB3-205ENST00000470495 STIM1Q13586 685 aa18.59■□□□□ 0.57
HOXB3-205ENST00000470495 ZHX3Q9H4I2 956 aa18.59■□□□□ 0.57
HOXB3-205ENST00000470495 APBA3O96018 575 aa18.59■□□□□ 0.57
HOXB3-205ENST00000470495 TXNRD3Q86VQ6 643 aa18.59■□□□□ 0.57
HOXB3-205ENST00000470495 RASGRP4Q8TDF6 673 aa18.59■□□□□ 0.57
HOXB3-205ENST00000470495 EYA3Q99504 573 aa18.59■□□□□ 0.57
HOXB3-205ENST00000470495 HLA-DOAP06340 250 aa18.59■□□□□ 0.57
HOXB3-205ENST00000470495 PARP1P09874 1014 aaKnown RBP18.59■□□□□ 0.57
HOXB3-205ENST00000470495 CCDC178Q5BJE1 867 aa18.59■□□□□ 0.57
HOXB3-205ENST00000470495 DPP8Q6V1X1 898 aaPredicted RBP18.59■□□□□ 0.57
HOXB3-205ENST00000470495 RUFY1Q96T51 708 aa18.59■□□□□ 0.57
HOXB3-205ENST00000470495 TCP11L1Q9NUJ3 509 aa18.59■□□□□ 0.57
HOXB3-205ENST00000470495 LONRF3Q496Y0 759 aa18.58■□□□□ 0.57
HOXB3-205ENST00000470495 NBPF3Q9H094 633 aa18.58■□□□□ 0.57
HOXB3-205ENST00000470495 FOXP1Q9H334 677 aaPredicted RBP18.58■□□□□ 0.57
HOXB3-205ENST00000470495 GPCPD1Q9NPB8 672 aa18.58■□□□□ 0.57
HOXB3-205ENST00000470495 MAPK8IP1Q9UQF2 711 aa18.58■□□□□ 0.57
HOXB3-205ENST00000470495 PARP4Q9UKK3 1724 aaKnown RBP18.58■□□□□ 0.57
HOXB3-205ENST00000470495 FOXP2O15409 715 aa18.58■□□□□ 0.56
HOXB3-205ENST00000470495 PPP6R2O75170 966 aa18.58■□□□□ 0.56
HOXB3-205ENST00000470495 SCG2P13521 617 aa18.58■□□□□ 0.56
HOXB3-205ENST00000470495 ATP2B4P23634 1241 aa18.58■□□□□ 0.56
HOXB3-205ENST00000470495 LETM2Q2VYF4 491 aa18.58■□□□□ 0.56
HOXB3-205ENST00000470495 CCDC12Q8WUD4 166 aaPredicted RBP18.58■□□□□ 0.56
HOXB3-205ENST00000470495 CSRNP2Q9H175 543 aa18.58■□□□□ 0.56
HOXB3-205ENST00000470495 CEP135Q66GS9 1140 aa18.58■□□□□ 0.56
HOXB3-205ENST00000470495 RRP15Q9Y3B9 282 aaKnown RBP18.57■□□□□ 0.56
HOXB3-205ENST00000470495 USP54Q70EL1 1684 aa18.57■□□□□ 0.56
HOXB3-205ENST00000470495 ZNF397Q8NF99 534 aaPredicted RBP18.57■□□□□ 0.56
HOXB3-205ENST00000470495 RRP36Q96EU6 259 aaKnown RBP18.57■□□□□ 0.56
HOXB3-205ENST00000470495 ARMC9Q7Z3E5 817 aa18.57■□□□□ 0.56
HOXB3-205ENST00000470495 CCDC150Q8NCX0 1101 aa18.57■□□□□ 0.56
HOXB3-205ENST00000470495 TTF2Q9UNY4 1162 aaKnown RBP18.57■□□□□ 0.56
HOXB3-205ENST00000470495 CNTNAP4Q9C0A0 1308 aa18.57■□□□□ 0.56
HOXB3-205ENST00000470495 ANKRD65E5RJM6 399 aa18.57■□□□□ 0.56
HOXB3-205ENST00000470495 TCP10Q12799 353 aa18.57■□□□□ 0.56
HOXB3-205ENST00000470495 RC3H1Q5TC82 1133 aaKnown RBP18.57■□□□□ 0.56
HOXB3-205ENST00000470495 BLZF1Q9H2G9 400 aa18.57■□□□□ 0.56
HOXB3-205ENST00000470495 VEZTQ9HBM0 779 aa18.57■□□□□ 0.56
HOXB3-205ENST00000470495 NFE2L3Q9Y4A8 694 aa18.57■□□□□ 0.56
HOXB3-205ENST00000470495 DDAH1O94760 285 aa18.56■□□□□ 0.56
HOXB3-205ENST00000470495 ARID5BQ14865 1188 aa18.56■□□□□ 0.56
HOXB3-205ENST00000470495 IQUBQ8NA54 791 aa18.56■□□□□ 0.56
HOXB3-205ENST00000470495 ABCC6O95255 1503 aa18.56■□□□□ 0.56
HOXB3-205ENST00000470495 SLC20A2Q08357 652 aa18.56■□□□□ 0.56
HOXB3-205ENST00000470495 PTGDRQ13258 359 aa18.56■□□□□ 0.56
HOXB3-205ENST00000470495 DTHD1Q6ZMT9 781 aa18.56■□□□□ 0.56
HOXB3-205ENST00000470495 KRT27Q7Z3Y8 459 aa18.56■□□□□ 0.56
HOXB3-205ENST00000470495 FUCA2Q9BTY2 467 aa18.56■□□□□ 0.56
HOXB3-205ENST00000470495 FBXO33Q7Z6M2 555 aa18.56■□□□□ 0.56
HOXB3-205ENST00000470495 CACTINQ8WUQ7 758 aaKnown RBP18.56■□□□□ 0.56
HOXB3-205ENST00000470495 SNW1Q13573 536 aaKnown RBP18.55■□□□□ 0.56
HOXB3-205ENST00000470495 MCTP2Q6DN12 878 aa18.55■□□□□ 0.56
HOXB3-205ENST00000470495 ILDR1Q86SU0 546 aaPredicted RBP18.55■□□□□ 0.56
HOXB3-205ENST00000470495 CPVLQ9H3G5 476 aa18.55■□□□□ 0.56
HOXB3-205ENST00000470495 JAKMIP3Q5VZ66 844 aa18.55■□□□□ 0.56
HOXB3-205ENST00000470495 NAIF1Q69YI7 327 aaPredicted RBP18.55■□□□□ 0.56
HOXB3-205ENST00000470495 FAM205CA6NFA0 338 aa18.55■□□□□ 0.56
HOXB3-205ENST00000470495 KRT18P05783 430 aaKnown RBP18.55■□□□□ 0.56
HOXB3-205ENST00000470495 SHC4Q6S5L8 630 aa18.55■□□□□ 0.56
HOXB3-205ENST00000470495 UIMC1Q96RL1 719 aa18.55■□□□□ 0.56
HOXB3-205ENST00000470495 C6orf50Q9HD87 102 aa18.55■□□□□ 0.56
HOXB3-205ENST00000470495 FANCLQ9NW38 375 aa18.55■□□□□ 0.56
HOXB3-205ENST00000470495 IDEP14735 1019 aa18.54■□□□□ 0.56
HOXB3-205ENST00000470495 CDC25AP30304 524 aa18.54■□□□□ 0.56
HOXB3-205ENST00000470495 RBM6P78332 1123 aaKnown RBP18.54■□□□□ 0.56
HOXB3-205ENST00000470495 GPSM2P81274 684 aa18.54■□□□□ 0.56
HOXB3-205ENST00000470495 SGSM3Q96HU1 749 aa18.54■□□□□ 0.56
HOXB3-205ENST00000470495 AP5Z1O43299 807 aa18.54■□□□□ 0.56
HOXB3-205ENST00000470495 WWC2Q6AWC2 1192 aa18.54■□□□□ 0.56
HOXB3-205ENST00000470495 UBA5Q9GZZ9 404 aa18.54■□□□□ 0.56
HOXB3-205ENST00000470495 KLRF2D3W0D1 207 aa18.54■□□□□ 0.56
HOXB3-205ENST00000470495 PCP11498 1178 aaKnown RBP18.54■□□□□ 0.56
HOXB3-205ENST00000470495 TNNI2P48788 182 aa18.54■□□□□ 0.56
HOXB3-205ENST00000470495 EVCP57679 992 aa18.54■□□□□ 0.56
HOXB3-205ENST00000470495 SYMPKQ92797 1274 aaKnown RBP18.54■□□□□ 0.56
HOXB3-205ENST00000470495 EPSTI1Q96J88 318 aa18.54■□□□□ 0.56
HOXB3-205ENST00000470495 N4BP3O15049 544 aa18.54■□□□□ 0.56
HOXB3-205ENST00000470495 PRR5LQ6MZQ0 368 aa18.54■□□□□ 0.56
HOXB3-205ENST00000470495 CD209Q9NNX6 404 aa18.54■□□□□ 0.56
HOXB3-205ENST00000470495 FRMPD2Q68DX3 1309 aaPredicted RBP18.53■□□□□ 0.56
HOXB3-205ENST00000470495 RANBP1P43487 201 aa18.53■□□□□ 0.56
HOXB3-205ENST00000470495 BLIDQ8IZY5 108 aa18.53■□□□□ 0.56
HOXB3-205ENST00000470495 LRRC47Q8N1G4 583 aaKnown RBP18.53■□□□□ 0.56
HOXB3-205ENST00000470495 HSPA1LP34931 641 aa18.53■□□□□ 0.56
HOXB3-205ENST00000470495 TBC1D22AQ8WUA7 517 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms