RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 SEC23AQ15436 765 aa17.55■□□□□ 0.4
CDC42SE1-203ENST00000470278 ADCK5Q3MIX3 580 aa17.55■□□□□ 0.4
CDC42SE1-203ENST00000470278 GMCL1Q96IK5 515 aa17.55■□□□□ 0.4
CDC42SE1-203ENST00000470278 ZNF333Q96JL9 665 aa17.55■□□□□ 0.4
CDC42SE1-203ENST00000470278 PARK7Q99497 189 aaKnown RBP17.55■□□□□ 0.4
CDC42SE1-203ENST00000470278 TMEM47Q9BQJ4 181 aa17.55■□□□□ 0.4
CDC42SE1-203ENST00000470278 ZKSCAN3Q9BRR0 538 aa17.55■□□□□ 0.4
CDC42SE1-203ENST00000470278 EFCC1Q9HA90 598 aa17.55■□□□□ 0.4
CDC42SE1-203ENST00000470278 PTCH2Q9Y6C5 1203 aa17.55■□□□□ 0.4
CDC42SE1-203ENST00000470278 RLFQ13129 1914 aa17.55■□□□□ 0.4
CDC42SE1-203ENST00000470278 EN2P19622 333 aaPredicted RBP17.54■□□□□ 0.4
CDC42SE1-203ENST00000470278 TAF1CQ15572 869 aaPredicted RBP17.54■□□□□ 0.4
CDC42SE1-203ENST00000470278 KIAA1755Q5JYT7 1200 aa17.54■□□□□ 0.4
CDC42SE1-203ENST00000470278 TMEM87BQ96K49 555 aa17.54■□□□□ 0.4
CDC42SE1-203ENST00000470278 ERICH2A1L162 156 aa17.53■□□□□ 0.4
CDC42SE1-203ENST00000470278 USP17L15C9J2P7 530 aa17.53■□□□□ 0.4
CDC42SE1-203ENST00000470278 USP17L13C9JLJ4 530 aa17.53■□□□□ 0.4
CDC42SE1-203ENST00000470278 USP17L11C9JVI0 530 aa17.53■□□□□ 0.4
CDC42SE1-203ENST00000470278 USP17L18D6R9N7 530 aa17.53■□□□□ 0.4
CDC42SE1-203ENST00000470278 USP17L22D6RA61 530 aa17.53■□□□□ 0.4
CDC42SE1-203ENST00000470278 USP17L17D6RBQ6 530 aa17.53■□□□□ 0.4
CDC42SE1-203ENST00000470278 USP17L19D6RCP7 530 aa17.53■□□□□ 0.4
CDC42SE1-203ENST00000470278 USP17L20D6RJB6 530 aa17.53■□□□□ 0.4
CDC42SE1-203ENST00000470278 PRC1O43663 620 aa17.53■□□□□ 0.4
CDC42SE1-203ENST00000470278 PSMA5P28066 241 aa17.53■□□□□ 0.4
CDC42SE1-203ENST00000470278 USP17L24Q0WX57 530 aa17.53■□□□□ 0.4
CDC42SE1-203ENST00000470278 COL9A3Q14050 684 aaPredicted RBP17.53■□□□□ 0.4
CDC42SE1-203ENST00000470278 IFIT1BQ5T764 474 aaKnown RBP17.53■□□□□ 0.4
CDC42SE1-203ENST00000470278 SPICE1Q8N0Z3 855 aa17.53■□□□□ 0.4
CDC42SE1-203ENST00000470278 TM6SF1Q9BZW5 370 aa17.53■□□□□ 0.4
CDC42SE1-203ENST00000470278 RPAP3Q9H6T3 665 aaPredicted RBP17.53■□□□□ 0.4
CDC42SE1-203ENST00000470278 SZT2Q5T011 3432 aa17.53■□□□□ 0.4
CDC42SE1-203ENST00000470278 DOCK3Q8IZD9 2030 aa17.53■□□□□ 0.4
CDC42SE1-203ENST00000470278 MYPNQ86TC9 1320 aa17.52■□□□□ 0.4
CDC42SE1-203ENST00000470278 IFIT3O14879 490 aaKnown RBP17.52■□□□□ 0.4
CDC42SE1-203ENST00000470278 OSBPP22059 807 aa17.52■□□□□ 0.4
CDC42SE1-203ENST00000470278 EXOSC10Q01780 885 aaKnown RBP17.52■□□□□ 0.4
CDC42SE1-203ENST00000470278 LBX2Q6XYB7 198 aa17.52■□□□□ 0.4
CDC42SE1-203ENST00000470278 CATSPERGQ6ZRH7 1159 aa17.52■□□□□ 0.4
CDC42SE1-203ENST00000470278 DHX32Q7L7V1 743 aaKnown RBP17.52■□□□□ 0.4
CDC42SE1-203ENST00000470278 IGDCC4Q8TDY8 1250 aa17.52■□□□□ 0.4
CDC42SE1-203ENST00000470278 JAKMIP1Q96N16 626 aaKnown RBP17.52■□□□□ 0.4
CDC42SE1-203ENST00000470278 ASCC2Q9H1I8 757 aaPredicted RBP17.52■□□□□ 0.4
CDC42SE1-203ENST00000470278 KAT14Q9H8E8 782 aa17.52■□□□□ 0.4
CDC42SE1-203ENST00000470278 ZFYVE28Q9HCC9 887 aa17.52■□□□□ 0.4
CDC42SE1-203ENST00000470278 PCDH10Q9P2E7 1040 aa17.52■□□□□ 0.4
CDC42SE1-203ENST00000470278 SH2B2O14492 632 aaPredicted RBP17.51■□□□□ 0.39
CDC42SE1-203ENST00000470278 TLR2O60603 784 aa17.51■□□□□ 0.39
CDC42SE1-203ENST00000470278 SNHG28P0DPA3 235 aa17.51■□□□□ 0.39
CDC42SE1-203ENST00000470278 LIFRP42702 1097 aa17.51■□□□□ 0.39
CDC42SE1-203ENST00000470278 IRX3P78415 501 aaPredicted RBP17.51■□□□□ 0.39
CDC42SE1-203ENST00000470278 WTAPQ15007 396 aa17.51■□□□□ 0.39
CDC42SE1-203ENST00000470278 TMEM67Q5HYA8 995 aa17.51■□□□□ 0.39
CDC42SE1-203ENST00000470278 SLFN13Q68D06 897 aa17.51■□□□□ 0.39
CDC42SE1-203ENST00000470278 BLOC1S2Q6QNY1 142 aa17.51■□□□□ 0.39
CDC42SE1-203ENST00000470278 CHST3Q7LGC8 479 aa17.51■□□□□ 0.39
CDC42SE1-203ENST00000470278 FBXL16Q8N461 479 aa17.51■□□□□ 0.39
CDC42SE1-203ENST00000470278 PNMA1Q8ND90 353 aa17.51■□□□□ 0.39
CDC42SE1-203ENST00000470278 GTF3C2Q8WUA4 911 aaPredicted RBP17.51■□□□□ 0.39
CDC42SE1-203ENST00000470278 DCAF4Q8WV16 495 aa17.51■□□□□ 0.39
CDC42SE1-203ENST00000470278 LY9Q9HBG7 655 aa17.51■□□□□ 0.39
CDC42SE1-203ENST00000470278 CYP2C8P10632 490 aa17.5■□□□□ 0.39
CDC42SE1-203ENST00000470278 PDHBP11177 359 aa17.5■□□□□ 0.39
CDC42SE1-203ENST00000470278 BMP3P12645 472 aa17.5■□□□□ 0.39
CDC42SE1-203ENST00000470278 RPS6KB1P23443 525 aa17.5■□□□□ 0.39
CDC42SE1-203ENST00000470278 SLC1A4P43007 532 aa17.5■□□□□ 0.39
CDC42SE1-203ENST00000470278 FAM83BQ5T0W9 1011 aa17.5■□□□□ 0.39
CDC42SE1-203ENST00000470278 TMTC2Q8N394 836 aa17.5■□□□□ 0.39
CDC42SE1-203ENST00000470278 SMCR8Q8TEV9 937 aaPredicted RBP17.5■□□□□ 0.39
CDC42SE1-203ENST00000470278 TANGO6Q9C0B7 1094 aa17.5■□□□□ 0.39
CDC42SE1-203ENST00000470278 ZSWIM6Q9HCJ5 1215 aa17.5■□□□□ 0.39
CDC42SE1-203ENST00000470278 RAD21O60216 631 aa17.49■□□□□ 0.39
CDC42SE1-203ENST00000470278 PLA2G6O60733 806 aa17.49■□□□□ 0.39
CDC42SE1-203ENST00000470278 CASTP20810 708 aaKnown RBP17.49■□□□□ 0.39
CDC42SE1-203ENST00000470278 GCLCP48506 637 aaPredicted RBP17.49■□□□□ 0.39
CDC42SE1-203ENST00000470278 HERVK_113P62684 666 aa17.49■□□□□ 0.39
CDC42SE1-203ENST00000470278 SGMS1Q86VZ5 419 aa17.49■□□□□ 0.39
CDC42SE1-203ENST00000470278 BACH2Q9BYV9 841 aa17.49■□□□□ 0.39
CDC42SE1-203ENST00000470278 UPF2Q9HAU5 1272 aaKnown RBP17.49■□□□□ 0.39
CDC42SE1-203ENST00000470278 SPDYE16A6NNV3 312 aaPredicted RBP17.48■□□□□ 0.39
CDC42SE1-203ENST00000470278 FLOT1O75955 427 aa17.48■□□□□ 0.39
CDC42SE1-203ENST00000470278 RBM25P49756 843 aaKnown RBP17.48■□□□□ 0.39
CDC42SE1-203ENST00000470278 LACTBP83111 547 aaPredicted RBP17.48■□□□□ 0.39
CDC42SE1-203ENST00000470278 COG2Q14746 738 aa17.48■□□□□ 0.39
CDC42SE1-203ENST00000470278 C17orf99Q6UX52 265 aa17.48■□□□□ 0.39
CDC42SE1-203ENST00000470278 RUFY3Q7L099 469 aa17.48■□□□□ 0.39
CDC42SE1-203ENST00000470278 NUP88Q99567 741 aaPredicted RBP17.48■□□□□ 0.39
CDC42SE1-203ENST00000470278 AGXT2Q9BYV1 514 aa17.48■□□□□ 0.39
CDC42SE1-203ENST00000470278 HOXC10Q9NYD6 342 aa17.48■□□□□ 0.39
CDC42SE1-203ENST00000470278 FEM1BQ9UK73 627 aa17.48■□□□□ 0.39
CDC42SE1-203ENST00000470278 ALPK3Q96L96 1907 aa17.47■□□□□ 0.39
CDC42SE1-203ENST00000470278 DDAH1O94760 285 aa17.47■□□□□ 0.39
CDC42SE1-203ENST00000470278 BCRP11274 1271 aa17.47■□□□□ 0.39
CDC42SE1-203ENST00000470278 DSG3P32926 999 aa17.47■□□□□ 0.39
CDC42SE1-203ENST00000470278 STAT2P52630 851 aa17.47■□□□□ 0.39
CDC42SE1-203ENST00000470278 ZNF543Q08ER8 600 aa17.47■□□□□ 0.39
CDC42SE1-203ENST00000470278 TROAPQ12815 778 aa17.47■□□□□ 0.39
CDC42SE1-203ENST00000470278 FAM110CQ1W6H9 321 aa17.47■□□□□ 0.39
CDC42SE1-203ENST00000470278 GPATCH4Q5T3I0 446 aaKnown RBP17.47■□□□□ 0.39
CDC42SE1-203ENST00000470278 RASGRP2Q7LDG7 609 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms