RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 APEX2Q9UBZ4 518 aa4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 FBXL21Q9UKT6 434 aa4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 AKT3Q9Y243 479 aa4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 THRAP3Q9Y2W1 955 aaKnown RBP4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 WASHC2CQ9Y4E1 1318 aa4.96□□□□□ -1.62
HMGB1P25-201ENST00000468402 DNAJC25-GNG10A0A024R161 153 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 KRTAP9-6A0A140TA67 174 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 PLEKHD1A6NEE1 506 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 KATNA1O75449 491 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 UBOX5O94941 541 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 DLGAP3O95886 979 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 PMLP29590 882 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 GRIA2P42262 883 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 ITKQ08881 620 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 MAP7Q14244 749 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 TTLL4Q14679 1199 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 SETDB1Q15047 1291 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 TTF1Q15361 905 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 NKG7Q16617 165 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 TRAPPC3LQ5T215 181 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 LCE3BQ5TA77 95 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 PRAMEF13Q5VWM6 474 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 C20orf204Q6ZNR8 217 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 SLCO4C1Q6ZQN7 724 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 C1orf229Q6ZS94 237 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 CHSY3Q70JA7 882 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 RNF180Q86T96 592 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 ZNF227Q86WZ6 799 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 MAP4K3Q8IVH8 894 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 MRPL41Q8IXM3 137 aaKnown RBP4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 RAVER1Q8IY67 606 aaKnown RBP4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 PPM1KQ8N3J5 372 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 RNF214Q8ND24 703 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 BVESQ8NE79 360 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 RIN3Q8TB24 985 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 WDR66Q8TBY9 1149 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 ZNF526Q8TF50 670 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 DDX1Q92499 740 aaKnown RBP4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 TSR2Q969E8 191 aaKnown RBP4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 MTMR8Q96EF0 704 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 ATXN3LQ9H3M9 355 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 FBRSQ9HAH7 460 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 GEMIN8Q9NWZ8 242 aaKnown RBP4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 PPP1R9AQ9ULJ8 1098 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 RIPOR2Q9Y4F9 1068 aa4.95□□□□□ -1.62
HMGB1P25-201ENST00000468402 TMPRSS2O15393 492 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 KPNA6O60684 536 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 ADAM11O75078 769 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 KCNH1O95259 989 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 RASGRP1O95267 797 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 FGFR1P11362 822 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 EPXP11678 715 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 ITGA4P13612 1032 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 POU3F3P20264 500 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 FLT3P36888 993 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 EPHB1P54762 984 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 TBX4P57082 545 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 PPP2R5DQ14738 602 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 PPP2R5AQ15172 486 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 POMZP3Q6PJE2 187 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 STRA8Q7Z7C7 330 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 CRACR2BQ8N4Y2 399 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 C12orf50Q8NA57 414 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 UBASH3BQ8TF42 649 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 CYB5D2Q8WUJ1 264 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 FANCD2OSQ96PS1 177 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 MDFIQ99750 246 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 PLVAPQ9BX97 442 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 KLHL25Q9H0H3 589 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 DISC1Q9NRI5 854 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 INTS7Q9NVH2 962 aaKnown RBP4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 SLC5A4Q9NY91 659 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 KCNK4Q9NYG8 393 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 SUSD2Q9UGT4 822 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 ZNF451Q9Y4E5 1061 aa4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 TNPO3Q9Y5L0 923 aaKnown RBP4.94□□□□□ -1.62
HMGB1P25-201ENST00000468402 LOC102724159A0A0B4J2E5 919 aa4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 BLACEA4D250 179 aa4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 SPATA31C1P0DKV0 1188 aa4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 CD247P20963 164 aa4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 RING1Q06587 406 aa4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 SART3Q15020 963 aaKnown RBP4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 PWP2Q15269 919 aaKnown RBP4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 CFAP100Q494V2 611 aa4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 UBE2R2Q712K3 238 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 BRAPQ7Z569 592 aa4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 EXOC8Q8IYI6 725 aa4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 AFAP1L2Q8N4X5 818 aa4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 MORC4Q8TE76 937 aa4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 DCAF11Q8TEB1 546 aa4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 BTN2A2Q8WVV5 523 aa4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 BRF1Q92994 677 aa4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 USP7Q93009 1102 aa4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 OSBP2Q969R2 916 aa4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 C8orf48Q96LL4 319 aa4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 MAGEB10Q96LZ2 347 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 FOXQ1Q9C009 403 aa4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 CYP4F12Q9HCS2 524 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms