RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 ARPP21Q9UBL0 812 aaPredicted RBP14.36□□□□□ -0.11
GTF3A-205ENST00000466776 SLC4A4Q9Y6R1 1079 aa14.36□□□□□ -0.11
GTF3A-205ENST00000466776 GREB1LQ9C091 1923 aaPredicted RBP14.36□□□□□ -0.11
GTF3A-205ENST00000466776 DNAH12Q6ZR08 3092 aa14.35□□□□□ -0.11
GTF3A-205ENST00000466776 USP17L12C9JPN9 530 aa14.35□□□□□ -0.11
GTF3A-205ENST00000466776 USP17L21D6R901 530 aa14.35□□□□□ -0.11
GTF3A-205ENST00000466776 PRKAB2O43741 272 aa14.35□□□□□ -0.11
GTF3A-205ENST00000466776 EVX2Q03828 476 aa14.35□□□□□ -0.11
GTF3A-205ENST00000466776 ATG4CQ96DT6 458 aa14.35□□□□□ -0.11
GTF3A-205ENST00000466776 RCAN3Q9UKA8 241 aa14.35□□□□□ -0.11
GTF3A-205ENST00000466776 RAD21O60216 631 aa14.34□□□□□ -0.11
GTF3A-205ENST00000466776 ATN1P54259 1190 aaPredicted RBP14.34□□□□□ -0.11
GTF3A-205ENST00000466776 KCTD2Q14681 263 aa14.34□□□□□ -0.11
GTF3A-205ENST00000466776 NRBP1Q9UHY1 535 aa14.34□□□□□ -0.11
GTF3A-205ENST00000466776 MYCNP04198 464 aaPredicted RBP14.33□□□□□ -0.12
GTF3A-205ENST00000466776 EEF2P13639 858 aaKnown RBP14.33□□□□□ -0.12
GTF3A-205ENST00000466776 RTP1P59025 263 aa14.33□□□□□ -0.12
GTF3A-205ENST00000466776 KIAA1755Q5JYT7 1200 aa14.33□□□□□ -0.12
GTF3A-205ENST00000466776 GJC2Q5T442 439 aaPredicted RBP14.33□□□□□ -0.12
GTF3A-205ENST00000466776 CLEC10AQ8IUN9 316 aa14.33□□□□□ -0.12
GTF3A-205ENST00000466776 TRPV1Q8NER1 839 aa14.33□□□□□ -0.12
GTF3A-205ENST00000466776 MAML3Q96JK9 1138 aa14.33□□□□□ -0.12
GTF3A-205ENST00000466776 MMP19Q99542 508 aa14.33□□□□□ -0.12
GTF3A-205ENST00000466776 ATP11BQ9Y2G3 1177 aa14.33□□□□□ -0.12
GTF3A-205ENST00000466776 CYP2D7A0A087X1C5 515 aa14.32□□□□□ -0.12
GTF3A-205ENST00000466776 COBLO75128 1261 aa14.32□□□□□ -0.12
GTF3A-205ENST00000466776 IGHA2P01877 340 aa14.32□□□□□ -0.12
GTF3A-205ENST00000466776 RARBP10826 455 aa14.32□□□□□ -0.12
GTF3A-205ENST00000466776 TMEM132BQ14DG7 1078 aa14.32□□□□□ -0.12
GTF3A-205ENST00000466776 LRRFIP1Q32MZ4 808 aaKnown RBP14.32□□□□□ -0.12
GTF3A-205ENST00000466776 ANO1Q5XXA6 986 aa14.32□□□□□ -0.12
GTF3A-205ENST00000466776 RIOX2Q8IUF8 465 aa14.32□□□□□ -0.12
GTF3A-205ENST00000466776 MKNK2Q9HBH9 465 aa14.32□□□□□ -0.12
GTF3A-205ENST00000466776 ZNF287Q9HBT7 754 aa14.32□□□□□ -0.12
GTF3A-205ENST00000466776 ECHDC1Q9NTX5 307 aa14.32□□□□□ -0.12
GTF3A-205ENST00000466776 STXBP5LQ9Y2K9 1186 aa14.32□□□□□ -0.12
GTF3A-205ENST00000466776 DIS3Q9Y2L1 958 aaKnown RBP14.32□□□□□ -0.12
GTF3A-205ENST00000466776 COL6A3P12111 3177 aa14.31□□□□□ -0.12
GTF3A-205ENST00000466776 STAT3P40763 770 aa14.31□□□□□ -0.12
GTF3A-205ENST00000466776 SLFNL1Q499Z3 407 aa14.31□□□□□ -0.12
GTF3A-205ENST00000466776 GIMAP6Q6P9H5 292 aa14.31□□□□□ -0.12
GTF3A-205ENST00000466776 CTR9Q6PD62 1173 aa14.31□□□□□ -0.12
GTF3A-205ENST00000466776 SLC39A5Q6ZMH5 540 aa14.31□□□□□ -0.12
GTF3A-205ENST00000466776 RNF180Q86T96 592 aa14.31□□□□□ -0.12
GTF3A-205ENST00000466776 SIAH1Q8IUQ4 282 aa14.31□□□□□ -0.12
GTF3A-205ENST00000466776 PUS7LQ9H0K6 701 aaKnown RBP14.31□□□□□ -0.12
GTF3A-205ENST00000466776 PRDM5Q9NQX1 630 aaPredicted RBP14.31□□□□□ -0.12
GTF3A-205ENST00000466776 PPP1R9AQ9ULJ8 1098 aa14.31□□□□□ -0.12
GTF3A-205ENST00000466776 ADAMTS5Q9UNA0 930 aa14.31□□□□□ -0.12
GTF3A-205ENST00000466776 CTDP1Q9Y5B0 961 aaPredicted RBP14.31□□□□□ -0.12
GTF3A-205ENST00000466776 MCM3APO60318 1980 aa14.31□□□□□ -0.12
GTF3A-205ENST00000466776 VWA5AO00534 786 aa14.3□□□□□ -0.12
GTF3A-205ENST00000466776 DLL1O00548 723 aa14.3□□□□□ -0.12
GTF3A-205ENST00000466776 ZFYP08048 801 aaPredicted RBP14.3□□□□□ -0.12
GTF3A-205ENST00000466776 GNAT2P19087 354 aa14.3□□□□□ -0.12
GTF3A-205ENST00000466776 SBK1Q52WX2 424 aa14.3□□□□□ -0.12
GTF3A-205ENST00000466776 FAM83BQ5T0W9 1011 aa14.3□□□□□ -0.12
GTF3A-205ENST00000466776 Q7L0L9 218 aa14.3□□□□□ -0.12
GTF3A-205ENST00000466776 KBTBD3Q8NAB2 608 aa14.3□□□□□ -0.12
GTF3A-205ENST00000466776 APPBP2Q92624 585 aa14.3□□□□□ -0.12
GTF3A-205ENST00000466776 XPNPEP3Q9NQH7 507 aa14.3□□□□□ -0.12
GTF3A-205ENST00000466776 MTMR10Q9NXD2 777 aa14.3□□□□□ -0.12
GTF3A-205ENST00000466776 CNPY2Q9Y2B0 182 aa14.3□□□□□ -0.12
GTF3A-205ENST00000466776 ROBO3Q96MS0 1386 aa14.3□□□□□ -0.12
GTF3A-205ENST00000466776 MINDY4BA8MYZ0 360 aa14.29□□□□□ -0.12
GTF3A-205ENST00000466776 SNX17Q15036 470 aa14.29□□□□□ -0.12
GTF3A-205ENST00000466776 LRRC41Q15345 812 aa14.29□□□□□ -0.12
GTF3A-205ENST00000466776 FAM47AQ5JRC9 791 aa14.29□□□□□ -0.12
GTF3A-205ENST00000466776 PRAMEF19Q5SWL8 479 aa14.29□□□□□ -0.12
GTF3A-205ENST00000466776 FAM109BQ6ICB4 259 aaPredicted RBP14.29□□□□□ -0.12
GTF3A-205ENST00000466776 STRBPQ96SI9 672 aaKnown RBP14.29□□□□□ -0.12
GTF3A-205ENST00000466776 SLF1Q9BQI6 1058 aa14.29□□□□□ -0.12
GTF3A-205ENST00000466776 TINF2Q9BSI4 451 aa14.29□□□□□ -0.12
GTF3A-205ENST00000466776 TEX13BQ9BXU2 312 aa14.29□□□□□ -0.12
GTF3A-205ENST00000466776 FBXO28Q9NVF7 368 aa14.29□□□□□ -0.12
GTF3A-205ENST00000466776 ZNF214Q9UL59 606 aaPredicted RBP14.29□□□□□ -0.12
GTF3A-205ENST00000466776 SMARCA5O60264 1052 aaPredicted RBP14.28□□□□□ -0.12
GTF3A-205ENST00000466776 AKR1A1P14550 325 aa14.28□□□□□ -0.12
GTF3A-205ENST00000466776 ADCYAP1R1P41586 468 aa14.28□□□□□ -0.12
GTF3A-205ENST00000466776 TDO2P48775 406 aa14.28□□□□□ -0.12
GTF3A-205ENST00000466776 TRIM60Q495X7 471 aa14.28□□□□□ -0.12
GTF3A-205ENST00000466776 ZNF697Q5TEC3 545 aa14.28□□□□□ -0.12
GTF3A-205ENST00000466776 C1orf53Q5VUE5 145 aa14.28□□□□□ -0.12
GTF3A-205ENST00000466776 ZNF444Q8N0Y2 327 aaPredicted RBP14.28□□□□□ -0.12
GTF3A-205ENST00000466776 MSL3Q8N5Y2 521 aaKnown RBP14.28□□□□□ -0.12
GTF3A-205ENST00000466776 NYAP2Q9P242 653 aa14.28□□□□□ -0.12
GTF3A-205ENST00000466776 F5H6K3 240 aa14.27□□□□□ -0.13
GTF3A-205ENST00000466776 RNF113AO15541 343 aaKnown RBP14.27□□□□□ -0.13
GTF3A-205ENST00000466776 ZBED4O75132 1171 aa14.27□□□□□ -0.13
GTF3A-205ENST00000466776 CHGBP05060 677 aa14.27□□□□□ -0.13
GTF3A-205ENST00000466776 APPP05067 770 aa14.27□□□□□ -0.13
GTF3A-205ENST00000466776 PGK2P07205 417 aa14.27□□□□□ -0.13
GTF3A-205ENST00000466776 KLRC3Q07444 240 aa14.27□□□□□ -0.13
GTF3A-205ENST00000466776 ZNF792Q3KQV3 632 aa14.27□□□□□ -0.13
GTF3A-205ENST00000466776 SNRNP48Q6IEG0 339 aaKnown RBP14.27□□□□□ -0.13
GTF3A-205ENST00000466776 PRPF38AQ8NAV1 312 aaKnown RBP14.27□□□□□ -0.13
GTF3A-205ENST00000466776 FERMT2Q96AC1 680 aa14.27□□□□□ -0.13
GTF3A-205ENST00000466776 DDX11Q96FC9 970 aa14.27□□□□□ -0.13
GTF3A-205ENST00000466776 NACAP1Q9BZK3 213 aa14.27□□□□□ -0.13
GTF3A-205ENST00000466776 SYNPO2Q9UMS6 1093 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms