RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 CCND3P30281 292 aaPredicted RBP22.96■■□□□ 1.27
CCHCR1-210ENST00000464012 NPLOC4Q8TAT6 608 aa22.96■■□□□ 1.27
CCHCR1-210ENST00000464012 PAWRQ96IZ0 340 aaKnown RBP22.96■■□□□ 1.27
CCHCR1-210ENST00000464012 NYAP2Q9P242 653 aa22.96■■□□□ 1.27
CCHCR1-210ENST00000464012 CLIP2Q9UDT6 1046 aa22.96■■□□□ 1.27
CCHCR1-210ENST00000464012 SUPT16HQ9Y5B9 1047 aaKnown RBP22.96■■□□□ 1.27
CCHCR1-210ENST00000464012 FOXP2O15409 715 aa22.95■■□□□ 1.26
CCHCR1-210ENST00000464012 SLC3A2P08195 630 aaKnown RBP22.95■■□□□ 1.26
CCHCR1-210ENST00000464012 ADORA2AP29274 412 aa22.95■■□□□ 1.26
CCHCR1-210ENST00000464012 PDE4BQ07343 736 aa22.95■■□□□ 1.26
CCHCR1-210ENST00000464012 FAM47AQ5JRC9 791 aa22.95■■□□□ 1.26
CCHCR1-210ENST00000464012 RILPL2Q969X0 211 aa22.95■■□□□ 1.26
CCHCR1-210ENST00000464012 CEP95Q96GE4 821 aa22.95■■□□□ 1.26
CCHCR1-210ENST00000464012 IGKV6D-41A0A0C4DH26 115 aa22.94■■□□□ 1.26
CCHCR1-210ENST00000464012 TSPY3P0CV98 308 aa22.94■■□□□ 1.26
CCHCR1-210ENST00000464012 TSPY8P0CW00 308 aa22.94■■□□□ 1.26
CCHCR1-210ENST00000464012 CTDSPL2Q05D32 466 aa22.94■■□□□ 1.26
CCHCR1-210ENST00000464012 TMEM132BQ14DG7 1078 aa22.94■■□□□ 1.26
CCHCR1-210ENST00000464012 VPS53Q5VIR6 699 aa22.94■■□□□ 1.26
CCHCR1-210ENST00000464012 MFSD14CQ5VZR4 134 aa22.94■■□□□ 1.26
CCHCR1-210ENST00000464012 DPP9Q86TI2 863 aa22.94■■□□□ 1.26
CCHCR1-210ENST00000464012 SHCBP1Q8NEM2 672 aa22.94■■□□□ 1.26
CCHCR1-210ENST00000464012 FAM227BQ96M60 508 aa22.94■■□□□ 1.26
CCHCR1-210ENST00000464012 PPP1R9AQ9ULJ8 1098 aa22.94■■□□□ 1.26
CCHCR1-210ENST00000464012 A0A0D9SFI3 127 aa22.93■■□□□ 1.26
CCHCR1-210ENST00000464012 F5H6K3 240 aa22.93■■□□□ 1.26
CCHCR1-210ENST00000464012 NDUFB10O96000 172 aa22.93■■□□□ 1.26
CCHCR1-210ENST00000464012 CAPN2P17655 700 aa22.93■■□□□ 1.26
CCHCR1-210ENST00000464012 KLRC3Q07444 240 aa22.93■■□□□ 1.26
CCHCR1-210ENST00000464012 CHD1LQ86WJ1 897 aa22.93■■□□□ 1.26
CCHCR1-210ENST00000464012 LRRC47Q8N1G4 583 aaKnown RBP22.93■■□□□ 1.26
CCHCR1-210ENST00000464012 PLIN4Q96Q06 1357 aa22.92■■□□□ 1.26
CCHCR1-210ENST00000464012 SLC34A2O95436 690 aa22.92■■□□□ 1.26
CCHCR1-210ENST00000464012 HOXC6P09630 235 aa22.92■■□□□ 1.26
CCHCR1-210ENST00000464012 NECAB2Q7Z6G3 386 aa22.92■■□□□ 1.26
CCHCR1-210ENST00000464012 ANKLE1Q8NAG6 615 aa22.92■■□□□ 1.26
CCHCR1-210ENST00000464012 MROH8Q9H579 483 aa22.92■■□□□ 1.26
CCHCR1-210ENST00000464012 HELLSQ9NRZ9 838 aa22.92■■□□□ 1.26
CCHCR1-210ENST00000464012 MTMR4Q9NYA4 1195 aa22.92■■□□□ 1.26
CCHCR1-210ENST00000464012 VWA5AO00534 786 aa22.91■■□□□ 1.26
CCHCR1-210ENST00000464012 STRNO43815 780 aa22.91■■□□□ 1.26
CCHCR1-210ENST00000464012 CYP2C19P33261 490 aa22.91■■□□□ 1.26
CCHCR1-210ENST00000464012 TFAP4Q01664 338 aa22.91■■□□□ 1.26
CCHCR1-210ENST00000464012 NUCB1Q02818 461 aa22.91■■□□□ 1.26
CCHCR1-210ENST00000464012 NMIQ13287 307 aaPredicted RBP22.91■■□□□ 1.26
CCHCR1-210ENST00000464012 SLF1Q9BQI6 1058 aa22.91■■□□□ 1.26
CCHCR1-210ENST00000464012 OGDHLQ9ULD0 1010 aa22.91■■□□□ 1.26
CCHCR1-210ENST00000464012 ADAMTS5Q9UNA0 930 aa22.91■■□□□ 1.26
CCHCR1-210ENST00000464012 TTLL1O95922 423 aa22.9■■□□□ 1.26
CCHCR1-210ENST00000464012 CNGA1P29973 690 aa22.9■■□□□ 1.26
CCHCR1-210ENST00000464012 NEDD1Q8NHV4 660 aa22.9■■□□□ 1.26
CCHCR1-210ENST00000464012 INCENPQ9NQS7 918 aa22.9■■□□□ 1.26
CCHCR1-210ENST00000464012 ISY1Q9ULR0 285 aaKnown RBP22.9■■□□□ 1.26
CCHCR1-210ENST00000464012 TSPY2A6NKD2 308 aa22.89■■□□□ 1.25
CCHCR1-210ENST00000464012 EVI5O60447 810 aa22.89■■□□□ 1.25
CCHCR1-210ENST00000464012 COBLO75128 1261 aa22.89■■□□□ 1.25
CCHCR1-210ENST00000464012 SLC25A27O95847 323 aa22.89■■□□□ 1.25
CCHCR1-210ENST00000464012 FCER1AP12319 257 aa22.89■■□□□ 1.25
CCHCR1-210ENST00000464012 IRX6P78412 446 aaPredicted RBP22.89■■□□□ 1.25
CCHCR1-210ENST00000464012 MCMDC2Q4G0Z9 681 aa22.89■■□□□ 1.25
CCHCR1-210ENST00000464012 HABP4Q5JVS0 413 aaKnown RBP22.89■■□□□ 1.25
CCHCR1-210ENST00000464012 PLEKHM2Q8IWE5 1019 aa22.89■■□□□ 1.25
CCHCR1-210ENST00000464012 CHMP4CQ96CF2 233 aa22.89■■□□□ 1.25
CCHCR1-210ENST00000464012 MMP19Q99542 508 aa22.89■■□□□ 1.25
CCHCR1-210ENST00000464012 NBPF3Q9H094 633 aa22.89■■□□□ 1.25
CCHCR1-210ENST00000464012 C11orf49Q9H6J7 331 aa22.89■■□□□ 1.25
CCHCR1-210ENST00000464012 ZNF214Q9UL59 606 aaPredicted RBP22.89■■□□□ 1.25
CCHCR1-210ENST00000464012 COLQQ9Y215 455 aaPredicted RBP22.89■■□□□ 1.25
CCHCR1-210ENST00000464012 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.89■■□□□ 1.25
CCHCR1-210ENST00000464012 LAMA4Q16363 1823 aa22.88■■□□□ 1.25
CCHCR1-210ENST00000464012 STAT3P40763 770 aa22.88■■□□□ 1.25
CCHCR1-210ENST00000464012 SLC4A3P48751 1232 aa22.88■■□□□ 1.25
CCHCR1-210ENST00000464012 MNX1P50219 401 aaPredicted RBP22.88■■□□□ 1.25
CCHCR1-210ENST00000464012 ZNF589Q86UQ0 364 aaPredicted RBP22.88■■□□□ 1.25
CCHCR1-210ENST00000464012 RIOX2Q8IUF8 465 aa22.88■■□□□ 1.25
CCHCR1-210ENST00000464012 REPS2Q8NFH8 660 aa22.88■■□□□ 1.25
CCHCR1-210ENST00000464012 NR2E3Q9Y5X4 410 aa22.88■■□□□ 1.25
CCHCR1-210ENST00000464012 LHX8Q68G74 356 aa22.87■■□□□ 1.25
CCHCR1-210ENST00000464012 CHRDL2Q6WN34 429 aa22.87■■□□□ 1.25
CCHCR1-210ENST00000464012 MKL1Q969V6 931 aa22.87■■□□□ 1.25
CCHCR1-210ENST00000464012 KIFC2Q96AC6 838 aa22.87■■□□□ 1.25
CCHCR1-210ENST00000464012 TOMM22Q9NS69 142 aa22.87■■□□□ 1.25
CCHCR1-210ENST00000464012 SLC5A4Q9NY91 659 aa22.87■■□□□ 1.25
CCHCR1-210ENST00000464012 CTDP1Q9Y5B0 961 aaPredicted RBP22.87■■□□□ 1.25
CCHCR1-210ENST00000464012 TACC3Q9Y6A5 838 aa22.87■■□□□ 1.25
CCHCR1-210ENST00000464012 CCDC171Q6TFL3 1326 aa22.86■■□□□ 1.25
CCHCR1-210ENST00000464012 RANBP6O60518 1105 aaKnown RBP22.86■■□□□ 1.25
CCHCR1-210ENST00000464012 OLFML2BQ68BL8 750 aa22.86■■□□□ 1.25
CCHCR1-210ENST00000464012 SLFN13Q68D06 897 aa22.86■■□□□ 1.25
CCHCR1-210ENST00000464012 SNRNP48Q6IEG0 339 aaKnown RBP22.86■■□□□ 1.25
CCHCR1-210ENST00000464012 ABRAQ8N0Z2 381 aa22.86■■□□□ 1.25
CCHCR1-210ENST00000464012 CPXCR1Q8N123 301 aa22.86■■□□□ 1.25
CCHCR1-210ENST00000464012 GMCL1P1Q8NEA9 526 aa22.86■■□□□ 1.25
CCHCR1-210ENST00000464012 TRPV1Q8NER1 839 aa22.86■■□□□ 1.25
CCHCR1-210ENST00000464012 DDX20Q9UHI6 824 aaKnown RBP22.86■■□□□ 1.25
CCHCR1-210ENST00000464012 CEP290O15078 2479 aa22.85■■□□□ 1.25
CCHCR1-210ENST00000464012 NMT2O60551 498 aa22.85■■□□□ 1.25
CCHCR1-210ENST00000464012 PGK2P07205 417 aa22.85■■□□□ 1.25
CCHCR1-210ENST00000464012 HSPD1P10809 573 aaKnown RBP22.85■■□□□ 1.25
CCHCR1-210ENST00000464012 CYBAP13498 195 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms