RNA–Protein interactions for RNA: ENST00000463596.5

APTX-211, Transcript of aprataxin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APTX, Length 1,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-211ENST00000463596 COL11A1P12107 1806 aaPredicted RBP16.55■□□□□ 0.24
APTX-211ENST00000463596 SPDYE16A6NNV3 312 aaPredicted RBP16.55■□□□□ 0.24
APTX-211ENST00000463596 BMP3P12645 472 aa16.55■□□□□ 0.24
APTX-211ENST00000463596 HOXD10P28358 340 aa16.55■□□□□ 0.24
APTX-211ENST00000463596 CCNA1P78396 465 aa16.55■□□□□ 0.24
APTX-211ENST00000463596 SLFN13Q68D06 897 aa16.55■□□□□ 0.24
APTX-211ENST00000463596 FAM160B2Q86V87 743 aa16.55■□□□□ 0.24
APTX-211ENST00000463596 PRPF38AQ8NAV1 312 aaKnown RBP16.55■□□□□ 0.24
APTX-211ENST00000463596 GPRC5AQ8NFJ5 357 aa16.55■□□□□ 0.24
APTX-211ENST00000463596 DCAF4Q8WV16 495 aa16.55■□□□□ 0.24
APTX-211ENST00000463596 TMEM47Q9BQJ4 181 aa16.55■□□□□ 0.24
APTX-211ENST00000463596 ERICH2A1L162 156 aa16.54■□□□□ 0.24
APTX-211ENST00000463596 NMT2O60551 498 aa16.54■□□□□ 0.24
APTX-211ENST00000463596 FLOT1O75955 427 aa16.54■□□□□ 0.24
APTX-211ENST00000463596 FAM83BQ5T0W9 1011 aa16.54■□□□□ 0.24
APTX-211ENST00000463596 SPICE1Q8N0Z3 855 aa16.54■□□□□ 0.24
APTX-211ENST00000463596 LRRC47Q8N1G4 583 aaKnown RBP16.54■□□□□ 0.24
APTX-211ENST00000463596 ANKRD13CQ8N6S4 541 aa16.54■□□□□ 0.24
APTX-211ENST00000463596 CHURC1Q8WUH1 139 aa16.54■□□□□ 0.24
APTX-211ENST00000463596 EFCC1Q9HA90 598 aa16.54■□□□□ 0.24
APTX-211ENST00000463596 RBPJLQ9UBG7 517 aa16.54■□□□□ 0.24
APTX-211ENST00000463596 PPP1R9AQ9ULJ8 1098 aa16.54■□□□□ 0.24
APTX-211ENST00000463596 WDR19Q8NEZ3 1342 aa16.54■□□□□ 0.24
APTX-211ENST00000463596 HMGB1P09429 215 aaKnown RBP16.53■□□□□ 0.24
APTX-211ENST00000463596 MCM5P33992 734 aa16.53■□□□□ 0.24
APTX-211ENST00000463596 HSPA4P34932 840 aa16.53■□□□□ 0.24
APTX-211ENST00000463596 COPB2P35606 906 aa16.53■□□□□ 0.24
APTX-211ENST00000463596 SLC1A4P43007 532 aa16.53■□□□□ 0.24
APTX-211ENST00000463596 FCGRTP55899 365 aa16.53■□□□□ 0.24
APTX-211ENST00000463596 ERVK-9P63128 1117 aa16.53■□□□□ 0.24
APTX-211ENST00000463596 ERVK-24P63145 666 aa16.53■□□□□ 0.24
APTX-211ENST00000463596 STOX1Q6ZVD7 989 aa16.53■□□□□ 0.24
APTX-211ENST00000463596 MB21D2Q8IYB1 491 aaPredicted RBP16.53■□□□□ 0.24
APTX-211ENST00000463596 TMTC2Q8N394 836 aa16.53■□□□□ 0.24
APTX-211ENST00000463596 ENAHQ8N8S7 591 aaPredicted RBP16.53■□□□□ 0.24
APTX-211ENST00000463596 CD99L2Q8TCZ2 262 aa16.53■□□□□ 0.24
APTX-211ENST00000463596 TMEM87BQ96K49 555 aa16.53■□□□□ 0.24
APTX-211ENST00000463596 SLF1Q9BQI6 1058 aa16.53■□□□□ 0.24
APTX-211ENST00000463596 TNKSO95271 1327 aa16.53■□□□□ 0.24
APTX-211ENST00000463596 SNHG28P0DPA3 235 aa16.52■□□□□ 0.24
APTX-211ENST00000463596 KCNA4P22459 653 aa16.52■□□□□ 0.24
APTX-211ENST00000463596 MAPK4P31152 587 aa16.52■□□□□ 0.24
APTX-211ENST00000463596 STAT2P52630 851 aa16.52■□□□□ 0.24
APTX-211ENST00000463596 SEC23AQ15436 765 aa16.52■□□□□ 0.24
APTX-211ENST00000463596 GPATCH4Q5T3I0 446 aaKnown RBP16.52■□□□□ 0.24
APTX-211ENST00000463596 SHCBP1Q8NEM2 672 aa16.52■□□□□ 0.24
APTX-211ENST00000463596 KAT14Q9H8E8 782 aa16.52■□□□□ 0.24
APTX-211ENST00000463596 ATP2A1O14983 1001 aa16.51■□□□□ 0.23
APTX-211ENST00000463596 RAD21O60216 631 aa16.51■□□□□ 0.23
APTX-211ENST00000463596 MCCP23508 829 aa16.51■□□□□ 0.23
APTX-211ENST00000463596 PSMC4P43686 418 aa16.51■□□□□ 0.23
APTX-211ENST00000463596 OAZ1P54368 228 aa16.51■□□□□ 0.23
APTX-211ENST00000463596 IFIT1BQ5T764 474 aaKnown RBP16.51■□□□□ 0.23
APTX-211ENST00000463596 FBXO46Q6PJ61 603 aaPredicted RBP16.51■□□□□ 0.23
APTX-211ENST00000463596 BTNL9Q6UXG8 535 aa16.51■□□□□ 0.23
APTX-211ENST00000463596 CYB5R4Q7L1T6 521 aa16.51■□□□□ 0.23
APTX-211ENST00000463596 OTOP1Q7RTM1 612 aa16.51■□□□□ 0.23
APTX-211ENST00000463596 PNMA1Q8ND90 353 aa16.51■□□□□ 0.23
APTX-211ENST00000463596 PNMA2Q9UL42 364 aa16.51■□□□□ 0.23
APTX-211ENST00000463596 VWA5AO00534 786 aa16.5■□□□□ 0.23
APTX-211ENST00000463596 IFIT3O14879 490 aaKnown RBP16.5■□□□□ 0.23
APTX-211ENST00000463596 SLC25A27O95847 323 aa16.5■□□□□ 0.23
APTX-211ENST00000463596 PDHBP11177 359 aa16.5■□□□□ 0.23
APTX-211ENST00000463596 LIFRP42702 1097 aa16.5■□□□□ 0.23
APTX-211ENST00000463596 COL13A1Q5TAT6 717 aaPredicted RBP16.5■□□□□ 0.23
APTX-211ENST00000463596 NKX2-3Q8TAU0 364 aa16.5■□□□□ 0.23
APTX-211ENST00000463596 COA7Q96BR5 231 aa16.5■□□□□ 0.23
APTX-211ENST00000463596 NEK1Q96PY6 1258 aa16.5■□□□□ 0.23
APTX-211ENST00000463596 ZKSCAN3Q9BRR0 538 aa16.5■□□□□ 0.23
APTX-211ENST00000463596 USP26Q9BXU7 913 aa16.5■□□□□ 0.23
APTX-211ENST00000463596 TXNRD2Q9NNW7 524 aa16.5■□□□□ 0.23
APTX-211ENST00000463596 TRIM17Q9Y577 477 aa16.5■□□□□ 0.23
APTX-211ENST00000463596 TAF6LQ9Y6J9 622 aa16.5■□□□□ 0.23
APTX-211ENST00000463596 ZNFX1Q9P2E3 1918 aaKnown RBP16.49■□□□□ 0.23
APTX-211ENST00000463596 CAPN15O75808 1086 aa16.49■□□□□ 0.23
APTX-211ENST00000463596 CNMDO75829 334 aa16.49■□□□□ 0.23
APTX-211ENST00000463596 FMNL1O95466 1100 aaPredicted RBP16.49■□□□□ 0.23
APTX-211ENST00000463596 WTAPQ15007 396 aa16.49■□□□□ 0.23
APTX-211ENST00000463596 ASPRV1Q53RT3 343 aa16.49■□□□□ 0.23
APTX-211ENST00000463596 POTEEQ6S8J3 1075 aa16.49■□□□□ 0.23
APTX-211ENST00000463596 IGDCC4Q8TDY8 1250 aa16.49■□□□□ 0.23
APTX-211ENST00000463596 ATG4CQ96DT6 458 aa16.49■□□□□ 0.23
APTX-211ENST00000463596 TRIM47Q96LD4 638 aa16.49■□□□□ 0.23
APTX-211ENST00000463596 MAP3K14Q99558 947 aa16.49■□□□□ 0.23
APTX-211ENST00000463596 PAGR1Q9BTK6 254 aa16.49■□□□□ 0.23
APTX-211ENST00000463596 SPATC1LQ9H0A9 340 aa16.49■□□□□ 0.23
APTX-211ENST00000463596 SRRDQ9UH36 339 aa16.49■□□□□ 0.23
APTX-211ENST00000463596 ZNF236Q9UL36 1845 aa16.49■□□□□ 0.23
APTX-211ENST00000463596 ZSWIM8A7E2V4 1837 aa16.48■□□□□ 0.23
APTX-211ENST00000463596 TMEM232C9JQI7 657 aa16.48■□□□□ 0.23
APTX-211ENST00000463596 TNPO2O14787 897 aaKnown RBP16.48■□□□□ 0.23
APTX-211ENST00000463596 STRNO43815 780 aa16.48■□□□□ 0.23
APTX-211ENST00000463596 ZBED4O75132 1171 aa16.48■□□□□ 0.23
APTX-211ENST00000463596 PSMA5P28066 241 aa16.48■□□□□ 0.23
APTX-211ENST00000463596 ANTXR2P58335 489 aa16.48■□□□□ 0.23
APTX-211ENST00000463596 ZNF543Q08ER8 600 aa16.48■□□□□ 0.23
APTX-211ENST00000463596 IRF5Q13568 498 aa16.48■□□□□ 0.23
APTX-211ENST00000463596 DHX32Q7L7V1 743 aaKnown RBP16.48■□□□□ 0.23
APTX-211ENST00000463596 RIOX2Q8IUF8 465 aa16.48■□□□□ 0.23
APTX-211ENST00000463596 CCAR1Q8IX12 1150 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms