RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 SMARCC2Q8TAQ2 1214 aa9.54□□□□□ -0.88
RPA3-205ENST00000462723 NUP133Q8WUM0 1156 aa9.54□□□□□ -0.88
RPA3-205ENST00000462723 DDX11Q96FC9 970 aa9.54□□□□□ -0.88
RPA3-205ENST00000462723 MYL10Q9BUA6 226 aa9.54□□□□□ -0.88
RPA3-205ENST00000462723 IL17RBQ9NRM6 502 aa9.54□□□□□ -0.88
RPA3-205ENST00000462723 HERC5Q9UII4 1024 aaKnown RBP9.54□□□□□ -0.88
RPA3-205ENST00000462723 MPHOSPH10O00566 681 aaKnown RBP9.53□□□□□ -0.88
RPA3-205ENST00000462723 STX6O43752 255 aa9.53□□□□□ -0.88
RPA3-205ENST00000462723 JAK2O60674 1132 aa9.53□□□□□ -0.88
RPA3-205ENST00000462723 CTDNEP1O95476 244 aa9.53□□□□□ -0.88
RPA3-205ENST00000462723 AKR1B1P15121 316 aa9.53□□□□□ -0.88
RPA3-205ENST00000462723 RXRAP19793 462 aa9.53□□□□□ -0.88
RPA3-205ENST00000462723 SYT1P21579 422 aa9.53□□□□□ -0.88
RPA3-205ENST00000462723 MAP3K9P80192 1104 aa9.53□□□□□ -0.88
RPA3-205ENST00000462723 CERKLQ49MI3 558 aaPredicted RBP9.53□□□□□ -0.88
RPA3-205ENST00000462723 LARP1BQ659C4 914 aaKnown RBP9.53□□□□□ -0.88
RPA3-205ENST00000462723 RCSD1Q6JBY9 416 aa9.53□□□□□ -0.88
RPA3-205ENST00000462723 CCDC144CPQ8IYA2 1237 aa9.53□□□□□ -0.88
RPA3-205ENST00000462723 FANCBQ8NB91 859 aa9.53□□□□□ -0.88
RPA3-205ENST00000462723 PNMA1Q8ND90 353 aa9.53□□□□□ -0.88
RPA3-205ENST00000462723 CTCFLQ8NI51 663 aaPredicted RBP9.53□□□□□ -0.88
RPA3-205ENST00000462723 RBM28Q9NW13 759 aaKnown RBP9.53□□□□□ -0.88
RPA3-205ENST00000462723 SEPT9Q9UHD8 586 aaPredicted RBP9.53□□□□□ -0.88
RPA3-205ENST00000462723 STX8Q9UNK0 236 aa9.53□□□□□ -0.88
RPA3-205ENST00000462723 PCDHGA10Q9Y5H3 936 aa9.53□□□□□ -0.88
RPA3-205ENST00000462723 ZC3H4Q9UPT8 1303 aaKnown RBP9.53□□□□□ -0.88
RPA3-205ENST00000462723 BRD1O95696 1058 aa9.52□□□□□ -0.89
RPA3-205ENST00000462723 EGFRP00533 1210 aa9.52□□□□□ -0.89
RPA3-205ENST00000462723 TOP1P11387 765 aaKnown RBP9.52□□□□□ -0.89
RPA3-205ENST00000462723 KIF5BP33176 963 aa9.52□□□□□ -0.89
RPA3-205ENST00000462723 ADD1P35611 737 aaKnown RBP9.52□□□□□ -0.89
RPA3-205ENST00000462723 TROAPQ12815 778 aa9.52□□□□□ -0.89
RPA3-205ENST00000462723 PKP1Q13835 747 aa9.52□□□□□ -0.89
RPA3-205ENST00000462723 RASA3Q14644 834 aa9.52□□□□□ -0.89
RPA3-205ENST00000462723 TATDN1Q6P1N9 297 aa9.52□□□□□ -0.89
RPA3-205ENST00000462723 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.52□□□□□ -0.89
RPA3-205ENST00000462723 APOBEC3FQ8IUX4 373 aaKnown RBP9.52□□□□□ -0.89
RPA3-205ENST00000462723 TRIM22Q8IYM9 498 aa9.52□□□□□ -0.89
RPA3-205ENST00000462723 TNPO1Q92973 898 aaKnown RBP9.52□□□□□ -0.89
RPA3-205ENST00000462723 CEP95Q96GE4 821 aa9.52□□□□□ -0.89
RPA3-205ENST00000462723 GBP4Q96PP9 640 aa9.52□□□□□ -0.89
RPA3-205ENST00000462723 MAP3K14Q99558 947 aa9.52□□□□□ -0.89
RPA3-205ENST00000462723 TMEM47Q9BQJ4 181 aa9.52□□□□□ -0.89
RPA3-205ENST00000462723 TMEM39BQ9GZU3 492 aa9.52□□□□□ -0.89
RPA3-205ENST00000462723 DNAJC18Q9H819 358 aa9.52□□□□□ -0.89
RPA3-205ENST00000462723 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.52□□□□□ -0.89
RPA3-205ENST00000462723 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.52□□□□□ -0.89
RPA3-205ENST00000462723 ORC3Q9UBD5 711 aaPredicted RBP9.52□□□□□ -0.89
RPA3-205ENST00000462723 HACL1Q9UJ83 578 aa9.52□□□□□ -0.89
RPA3-205ENST00000462723 ARIH1Q9Y4X5 557 aaPredicted RBP9.52□□□□□ -0.89
RPA3-205ENST00000462723 GREB1LQ9C091 1923 aaPredicted RBP9.52□□□□□ -0.89
RPA3-205ENST00000462723 IGKV6D-41A0A0C4DH26 115 aa9.51□□□□□ -0.89
RPA3-205ENST00000462723 VPS37CA5D8V6 355 aaPredicted RBP9.51□□□□□ -0.89
RPA3-205ENST00000462723 FAM196BA6NMK8 535 aa9.51□□□□□ -0.89
RPA3-205ENST00000462723 H3BQV1 296 aa9.51□□□□□ -0.89
RPA3-205ENST00000462723 DDNO94850 711 aaPredicted RBP9.51□□□□□ -0.89
RPA3-205ENST00000462723 TTLL1O95922 423 aa9.51□□□□□ -0.89
RPA3-205ENST00000462723 ZSCAN22P10073 491 aaPredicted RBP9.51□□□□□ -0.89
RPA3-205ENST00000462723 IFNAR1P17181 557 aa9.51□□□□□ -0.89
RPA3-205ENST00000462723 CDC27P30260 824 aa9.51□□□□□ -0.89
RPA3-205ENST00000462723 NOVP48745 357 aa9.51□□□□□ -0.89
RPA3-205ENST00000462723 SSRP1Q08945 709 aaKnown RBP9.51□□□□□ -0.89
RPA3-205ENST00000462723 ABCB5Q2M3G0 1257 aa9.51□□□□□ -0.89
RPA3-205ENST00000462723 TMEM179Q6ZVK1 233 aa9.51□□□□□ -0.89
RPA3-205ENST00000462723 WASF1Q92558 559 aa9.51□□□□□ -0.89
RPA3-205ENST00000462723 HOOK2Q96ED9 719 aa9.51□□□□□ -0.89
RPA3-205ENST00000462723 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.51□□□□□ -0.89
RPA3-205ENST00000462723 KANSL2Q9H9L4 492 aa9.51□□□□□ -0.89
RPA3-205ENST00000462723 CABP5Q9NP86 173 aa9.51□□□□□ -0.89
RPA3-205ENST00000462723 FAM217BQ9NTX9 383 aaPredicted RBP9.51□□□□□ -0.89
RPA3-205ENST00000462723 MTMR4Q9NYA4 1195 aa9.51□□□□□ -0.89
RPA3-205ENST00000462723 ZDHHC9Q9Y397 364 aa9.51□□□□□ -0.89
RPA3-205ENST00000462723 STK36Q9NRP7 1315 aa9.51□□□□□ -0.89
RPA3-205ENST00000462723 MYH6P13533 1939 aa9.5□□□□□ -0.89
RPA3-205ENST00000462723 TESPA1A2RU30 521 aaPredicted RBP9.5□□□□□ -0.89
RPA3-205ENST00000462723 DTNBO60941 627 aa9.5□□□□□ -0.89
RPA3-205ENST00000462723 FMNL1O95466 1100 aaPredicted RBP9.5□□□□□ -0.89
RPA3-205ENST00000462723 FDPSP14324 419 aaKnown RBP9.5□□□□□ -0.89
RPA3-205ENST00000462723 EPS15P42566 896 aa9.5□□□□□ -0.89
RPA3-205ENST00000462723 GNAQP50148 359 aa9.5□□□□□ -0.89
RPA3-205ENST00000462723 AKAP17AQ02040 695 aaKnown RBP9.5□□□□□ -0.89
RPA3-205ENST00000462723 GRM4Q14833 912 aa9.5□□□□□ -0.89
RPA3-205ENST00000462723 NTRK3Q16288 839 aa9.5□□□□□ -0.89
RPA3-205ENST00000462723 ANGEL2Q5VTE6 544 aaKnown RBP9.5□□□□□ -0.89
RPA3-205ENST00000462723 FOXD4L5Q5VV16 416 aaPredicted RBP9.5□□□□□ -0.89
RPA3-205ENST00000462723 TMTC3Q6ZXV5 915 aa9.5□□□□□ -0.89
RPA3-205ENST00000462723 TRPM4Q8TD43 1214 aa9.5□□□□□ -0.89
RPA3-205ENST00000462723 FOXD4L4Q8WXT5 416 aaPredicted RBP9.5□□□□□ -0.89
RPA3-205ENST00000462723 LRCH3Q96II8 777 aa9.5□□□□□ -0.89
RPA3-205ENST00000462723 SLC26A6Q9BXS9 759 aa9.5□□□□□ -0.89
RPA3-205ENST00000462723 DEFB129Q9H1M3 183 aa9.5□□□□□ -0.89
RPA3-205ENST00000462723 ADARB2Q9NS39 739 aaKnown RBP9.5□□□□□ -0.89
RPA3-205ENST00000462723 CLIP2Q9UDT6 1046 aa9.5□□□□□ -0.89
RPA3-205ENST00000462723 MTMR6Q9Y217 621 aa9.5□□□□□ -0.89
RPA3-205ENST00000462723 ATP6V1DQ9Y5K8 247 aa9.5□□□□□ -0.89
RPA3-205ENST00000462723 MYH4Q9Y623 1939 aa9.5□□□□□ -0.89
RPA3-205ENST00000462723 SPDYE16A6NNV3 312 aaPredicted RBP9.49□□□□□ -0.89
RPA3-205ENST00000462723 DPYSL4O14531 572 aa9.49□□□□□ -0.89
RPA3-205ENST00000462723 PPFIA3O75145 1194 aa9.49□□□□□ -0.89
RPA3-205ENST00000462723 GDF11O95390 407 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms