RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 DOCK3Q8IZD9 2030 aa7.47□□□□□ -1.21
SF3B1-206ENST00000462613 RLFQ13129 1914 aa7.46□□□□□ -1.21
SF3B1-206ENST00000462613 PLXNB2O15031 1838 aa7.46□□□□□ -1.21
SF3B1-206ENST00000462613 DHX16O60231 1041 aaKnown RBP7.46□□□□□ -1.22
SF3B1-206ENST00000462613 FKTNO75072 461 aa7.46□□□□□ -1.22
SF3B1-206ENST00000462613 TBC1D8O95759 1140 aa7.46□□□□□ -1.22
SF3B1-206ENST00000462613 NDUFB10O96000 172 aa7.46□□□□□ -1.22
SF3B1-206ENST00000462613 PARP1P09874 1014 aaKnown RBP7.46□□□□□ -1.22
SF3B1-206ENST00000462613 CASTP20810 708 aaKnown RBP7.46□□□□□ -1.22
SF3B1-206ENST00000462613 KIF5BP33176 963 aa7.46□□□□□ -1.22
SF3B1-206ENST00000462613 LIFRP42702 1097 aa7.46□□□□□ -1.22
SF3B1-206ENST00000462613 HERVK_113P62684 666 aa7.46□□□□□ -1.22
SF3B1-206ENST00000462613 SP3Q02447 781 aa7.46□□□□□ -1.22
SF3B1-206ENST00000462613 ASPRV1Q53RT3 343 aa7.46□□□□□ -1.22
SF3B1-206ENST00000462613 FAM83BQ5T0W9 1011 aa7.46□□□□□ -1.22
SF3B1-206ENST00000462613 TREML2Q5T2D2 321 aa7.46□□□□□ -1.22
SF3B1-206ENST00000462613 GPAT2Q6NUI2 795 aa7.46□□□□□ -1.22
SF3B1-206ENST00000462613 CATSPERGQ6ZRH7 1159 aa7.46□□□□□ -1.22
SF3B1-206ENST00000462613 MB21D2Q8IYB1 491 aaPredicted RBP7.46□□□□□ -1.22
SF3B1-206ENST00000462613 MB21D1Q8N884 522 aa7.46□□□□□ -1.22
SF3B1-206ENST00000462613 ENAHQ8N8S7 591 aaPredicted RBP7.46□□□□□ -1.22
SF3B1-206ENST00000462613 PRPF38AQ8NAV1 312 aaKnown RBP7.46□□□□□ -1.22
SF3B1-206ENST00000462613 IL27Q8NEV9 243 aa7.46□□□□□ -1.22
SF3B1-206ENST00000462613 CTCFLQ8NI51 663 aaPredicted RBP7.46□□□□□ -1.22
SF3B1-206ENST00000462613 ERO1AQ96HE7 468 aa7.46□□□□□ -1.22
SF3B1-206ENST00000462613 GMCL1Q96IK5 515 aa7.46□□□□□ -1.22
SF3B1-206ENST00000462613 PTPN18Q99952 460 aa7.46□□□□□ -1.22
SF3B1-206ENST00000462613 FEM1BQ9UK73 627 aa7.46□□□□□ -1.22
SF3B1-206ENST00000462613 PNMA2Q9UL42 364 aa7.46□□□□□ -1.22
SF3B1-206ENST00000462613 SNX14Q9Y5W7 946 aa7.46□□□□□ -1.22
SF3B1-206ENST00000462613 PLXNA1Q9UIW2 1896 aa7.46□□□□□ -1.22
SF3B1-206ENST00000462613 A0A0G2JMZ2 1700 aa7.46□□□□□ -1.22
SF3B1-206ENST00000462613 BAZ2BQ9UIF8 2168 aaKnown RBP7.46□□□□□ -1.22
SF3B1-206ENST00000462613 GPR25O00155 361 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 ZBED4O75132 1171 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 GNRH1P01148 92 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 CYP2C8P10632 490 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 HOXD10P28358 340 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 COPB2P35606 906 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 NOVP48745 357 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 GNAQP50148 359 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 TRAF1Q13077 416 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 MOGSQ13724 837 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 FAM110CQ1W6H9 321 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 C8orf34Q49A92 452 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 STOX1Q6ZVD7 989 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 CYB5R4Q7L1T6 521 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 CHST3Q7LGC8 479 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 SIAH1Q8IUQ4 282 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 ANKRD13CQ8N6S4 541 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 GPRC5AQ8NFJ5 357 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 NUP133Q8WUM0 1156 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 ANKS1AQ92625 1134 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 KCNB2Q92953 911 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 SLF1Q9BQI6 1058 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 PAGR1Q9BTK6 254 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 TM6SF1Q9BZW5 370 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 NAP1L2Q9ULW6 460 aaPredicted RBP7.45□□□□□ -1.22
SF3B1-206ENST00000462613 RABGAP1Q9Y3P9 1069 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 SLC12A7Q9Y666 1083 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 IVNS1ABPQ9Y6Y0 642 aa7.45□□□□□ -1.22
SF3B1-206ENST00000462613 RBBP6Q7Z6E9 1792 aaKnown RBP7.45□□□□□ -1.22
SF3B1-206ENST00000462613 CCDC196A0A1B0GTZ2 297 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 TMEM232C9JQI7 657 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 FOXN1O15353 648 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 PLA2G6O60733 806 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 DDAH1O94760 285 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 PDHBP11177 359 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 RPS6KB1P23443 525 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 DSG3P32926 999 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 LBX1P52954 281 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 FCGRTP55899 365 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 DGKZQ13574 1117 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 PLS1Q14651 629 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 PPP2R5BQ15173 497 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 ANKRD1Q15327 319 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 SEC23AQ15436 765 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 ADCK5Q3MIX3 580 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 WDR78Q5VTH9 848 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 LBX2Q6XYB7 198 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 RUFY3Q7L099 469 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 RASEFQ8IZ41 740 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 ZNF654Q8IZM8 581 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 KIFC2Q96AC6 838 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 COA7Q96BR5 231 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 CHMP4CQ96CF2 233 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 MAP3K14Q99558 947 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 NUP88Q99567 741 aaPredicted RBP7.44□□□□□ -1.22
SF3B1-206ENST00000462613 P2RX7Q99572 595 aaKnown RBP7.44□□□□□ -1.22
SF3B1-206ENST00000462613 C22orf23Q9BZE7 217 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 PRDM10Q9NQV6 1147 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 CPA4Q9UI42 421 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 TSKSQ9UJT2 592 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 PPP1R9AQ9ULJ8 1098 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 TACC3Q9Y6A5 838 aa7.44□□□□□ -1.22
SF3B1-206ENST00000462613 SPDYE16A6NNV3 312 aaPredicted RBP7.43□□□□□ -1.22
SF3B1-206ENST00000462613 SH2B2O14492 632 aaPredicted RBP7.43□□□□□ -1.22
SF3B1-206ENST00000462613 TNPO2O14787 897 aaKnown RBP7.43□□□□□ -1.22
SF3B1-206ENST00000462613 ZBTB43O43298 467 aa7.43□□□□□ -1.22
SF3B1-206ENST00000462613 FMNL1O95466 1100 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms