RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 ADORA2AP29274 412 aa9.57□□□□□ -0.88
CDC42BPA-210ENST00000462553 ATN1P54259 1190 aaPredicted RBP9.57□□□□□ -0.88
CDC42BPA-210ENST00000462553 OLFML2BQ68BL8 750 aa9.57□□□□□ -0.88
CDC42BPA-210ENST00000462553 SIAH1Q8IUQ4 282 aa9.57□□□□□ -0.88
CDC42BPA-210ENST00000462553 EXOC6Q8TAG9 804 aa9.57□□□□□ -0.88
CDC42BPA-210ENST00000462553 SDR42E1Q8WUS8 393 aa9.57□□□□□ -0.88
CDC42BPA-210ENST00000462553 SENP6Q9GZR1 1112 aaPredicted RBP9.57□□□□□ -0.88
CDC42BPA-210ENST00000462553 SPATC1LQ9H0A9 340 aa9.57□□□□□ -0.88
CDC42BPA-210ENST00000462553 CWC22Q9HCG8 908 aaKnown RBP9.57□□□□□ -0.88
CDC42BPA-210ENST00000462553 CABP5Q9NP86 173 aa9.57□□□□□ -0.88
CDC42BPA-210ENST00000462553 DCP1AQ9NPI6 582 aaPredicted RBP9.57□□□□□ -0.88
CDC42BPA-210ENST00000462553 IVNS1ABPQ9Y6Y0 642 aa9.57□□□□□ -0.88
CDC42BPA-210ENST00000462553 NCOR1O75376 2440 aa9.57□□□□□ -0.88
CDC42BPA-210ENST00000462553 SALL3Q9BXA9 1300 aa9.56□□□□□ -0.88
CDC42BPA-210ENST00000462553 LRRC37A2A6NM11 1700 aa9.56□□□□□ -0.88
CDC42BPA-210ENST00000462553 GBF1Q92538 1859 aa9.56□□□□□ -0.88
CDC42BPA-210ENST00000462553 ROBO3Q96MS0 1386 aa9.56□□□□□ -0.88
CDC42BPA-210ENST00000462553 MSCO60682 206 aa9.56□□□□□ -0.88
CDC42BPA-210ENST00000462553 COBLO75128 1261 aa9.56□□□□□ -0.88
CDC42BPA-210ENST00000462553 POLR3DP05423 398 aaPredicted RBP9.56□□□□□ -0.88
CDC42BPA-210ENST00000462553 ATP5JP18859 108 aa9.56□□□□□ -0.88
CDC42BPA-210ENST00000462553 ERCC3P19447 782 aa9.56□□□□□ -0.88
CDC42BPA-210ENST00000462553 RTP1P59025 263 aa9.56□□□□□ -0.88
CDC42BPA-210ENST00000462553 ATP2B2Q01814 1243 aa9.56□□□□□ -0.88
CDC42BPA-210ENST00000462553 HDAC1Q13547 482 aaPredicted RBP9.56□□□□□ -0.88
CDC42BPA-210ENST00000462553 SNX17Q15036 470 aa9.56□□□□□ -0.88
CDC42BPA-210ENST00000462553 SLFNL1Q499Z3 407 aa9.56□□□□□ -0.88
CDC42BPA-210ENST00000462553 SLC9C2Q5TAH2 1124 aa9.56□□□□□ -0.88
CDC42BPA-210ENST00000462553 SHCBP1Q8NEM2 672 aa9.56□□□□□ -0.88
CDC42BPA-210ENST00000462553 CRNKL1Q9BZJ0 848 aaKnown RBP9.56□□□□□ -0.88
CDC42BPA-210ENST00000462553 TANGO6Q9C0B7 1094 aa9.56□□□□□ -0.88
CDC42BPA-210ENST00000462553 MCM9Q9NXL9 1143 aa9.56□□□□□ -0.88
CDC42BPA-210ENST00000462553 LCTP09848 1927 aa9.56□□□□□ -0.88
CDC42BPA-210ENST00000462553 GOLIM4O00461 696 aa9.55□□□□□ -0.88
CDC42BPA-210ENST00000462553 MPHOSPH10O00566 681 aaKnown RBP9.55□□□□□ -0.88
CDC42BPA-210ENST00000462553 PRKAB2O43741 272 aa9.55□□□□□ -0.88
CDC42BPA-210ENST00000462553 CHGBP05060 677 aa9.55□□□□□ -0.88
CDC42BPA-210ENST00000462553 AKR1B1P15121 316 aa9.55□□□□□ -0.88
CDC42BPA-210ENST00000462553 CNGA1P29973 690 aa9.55□□□□□ -0.88
CDC42BPA-210ENST00000462553 COG2Q14746 738 aa9.55□□□□□ -0.88
CDC42BPA-210ENST00000462553 TTF1Q15361 905 aaPredicted RBP9.55□□□□□ -0.88
CDC42BPA-210ENST00000462553 GJC2Q5T442 439 aaPredicted RBP9.55□□□□□ -0.88
CDC42BPA-210ENST00000462553 ANO1Q5XXA6 986 aa9.55□□□□□ -0.88
CDC42BPA-210ENST00000462553 TSHZ3Q63HK5 1081 aa9.55□□□□□ -0.88
CDC42BPA-210ENST00000462553 FAM109BQ6ICB4 259 aaPredicted RBP9.55□□□□□ -0.88
CDC42BPA-210ENST00000462553 TMEM179Q6ZVK1 233 aa9.55□□□□□ -0.88
CDC42BPA-210ENST00000462553 OTUD7AQ8TE49 926 aaPredicted RBP9.55□□□□□ -0.88
CDC42BPA-210ENST00000462553 ATG4CQ96DT6 458 aa9.55□□□□□ -0.88
CDC42BPA-210ENST00000462553 DYNLL2Q96FJ2 89 aa9.55□□□□□ -0.88
CDC42BPA-210ENST00000462553 DNAJC2Q99543 621 aaKnown RBP9.55□□□□□ -0.88
CDC42BPA-210ENST00000462553 HAUS7Q99871 368 aa9.55□□□□□ -0.88
CDC42BPA-210ENST00000462553 BCL11AQ9H165 835 aa9.55□□□□□ -0.88
CDC42BPA-210ENST00000462553 BOLA2Q9H3K6 86 aa9.55□□□□□ -0.88
CDC42BPA-210ENST00000462553 ARMT1Q9H993 441 aa9.55□□□□□ -0.88
CDC42BPA-210ENST00000462553 XIRP2A4UGR9 3374 aa9.55□□□□□ -0.88
CDC42BPA-210ENST00000462553 BDP1A6H8Y1 2624 aa9.54□□□□□ -0.88
CDC42BPA-210ENST00000462553 CYP2D7A0A087X1C5 515 aa9.54□□□□□ -0.88
CDC42BPA-210ENST00000462553 SEPT4O43236 478 aa9.54□□□□□ -0.88
CDC42BPA-210ENST00000462553 STRNO43815 780 aa9.54□□□□□ -0.88
CDC42BPA-210ENST00000462553 MBD4O95243 580 aa9.54□□□□□ -0.88
CDC42BPA-210ENST00000462553 ICA1Q05084 483 aa9.54□□□□□ -0.88
CDC42BPA-210ENST00000462553 AAMPQ13685 434 aa9.54□□□□□ -0.88
CDC42BPA-210ENST00000462553 FAM47AQ5JRC9 791 aa9.54□□□□□ -0.88
CDC42BPA-210ENST00000462553 C9orf50Q5SZB4 431 aa9.54□□□□□ -0.88
CDC42BPA-210ENST00000462553 DPP9Q86TI2 863 aa9.54□□□□□ -0.88
CDC42BPA-210ENST00000462553 SPICE1Q8N0Z3 855 aa9.54□□□□□ -0.88
CDC42BPA-210ENST00000462553 MB21D1Q8N884 522 aa9.54□□□□□ -0.88
CDC42BPA-210ENST00000462553 MAML3Q96JK9 1138 aa9.54□□□□□ -0.88
CDC42BPA-210ENST00000462553 VCPKMTQ9H867 229 aa9.54□□□□□ -0.88
CDC42BPA-210ENST00000462553 PDLIM7Q9NR12 457 aa9.54□□□□□ -0.88
CDC42BPA-210ENST00000462553 PAG1Q9NWQ8 432 aa9.54□□□□□ -0.88
CDC42BPA-210ENST00000462553 HOXC10Q9NYD6 342 aa9.54□□□□□ -0.88
CDC42BPA-210ENST00000462553 SWAP70Q9UH65 585 aa9.54□□□□□ -0.88
CDC42BPA-210ENST00000462553 ATP11BQ9Y2G3 1177 aa9.54□□□□□ -0.88
CDC42BPA-210ENST00000462553 TMX2Q9Y320 296 aa9.54□□□□□ -0.88
CDC42BPA-210ENST00000462553 WDR46O15213 610 aaKnown RBP9.53□□□□□ -0.88
CDC42BPA-210ENST00000462553 FLOT1O75955 427 aa9.53□□□□□ -0.88
CDC42BPA-210ENST00000462553 ADD2P35612 726 aa9.53□□□□□ -0.88
CDC42BPA-210ENST00000462553 TMEM132BQ14DG7 1078 aa9.53□□□□□ -0.88
CDC42BPA-210ENST00000462553 LRRC41Q15345 812 aa9.53□□□□□ -0.88
CDC42BPA-210ENST00000462553 TRIM60Q495X7 471 aa9.53□□□□□ -0.88
CDC42BPA-210ENST00000462553 PRAMEF19Q5SWL8 479 aa9.53□□□□□ -0.88
CDC42BPA-210ENST00000462553 SLC39A5Q6ZMH5 540 aa9.53□□□□□ -0.88
CDC42BPA-210ENST00000462553 C16orf86Q6ZW13 317 aa9.53□□□□□ -0.88
CDC42BPA-210ENST00000462553 SH3RF1Q7Z6J0 888 aa9.53□□□□□ -0.88
CDC42BPA-210ENST00000462553 ABRAQ8N0Z2 381 aa9.53□□□□□ -0.88
CDC42BPA-210ENST00000462553 REPS2Q8NFH8 660 aa9.53□□□□□ -0.88
CDC42BPA-210ENST00000462553 PI4K2BQ8TCG2 481 aa9.53□□□□□ -0.88
CDC42BPA-210ENST00000462553 TSPYL2Q9H2G4 693 aaPredicted RBP9.53□□□□□ -0.88
CDC42BPA-210ENST00000462553 MROH8Q9H579 483 aa9.53□□□□□ -0.88
CDC42BPA-210ENST00000462553 FBXO28Q9NVF7 368 aa9.53□□□□□ -0.88
CDC42BPA-210ENST00000462553 ADAMTS5Q9UNA0 930 aa9.53□□□□□ -0.88
CDC42BPA-210ENST00000462553 TRIM43BA6NCK2 446 aa9.52□□□□□ -0.89
CDC42BPA-210ENST00000462553 KBTBD13C9JR72 458 aa9.52□□□□□ -0.89
CDC42BPA-210ENST00000462553 IGHDP01880 384 aa9.52□□□□□ -0.89
CDC42BPA-210ENST00000462553 ITGB8P26012 769 aa9.52□□□□□ -0.89
CDC42BPA-210ENST00000462553 CDK8P49336 464 aa9.52□□□□□ -0.89
CDC42BPA-210ENST00000462553 IRX6P78412 446 aaPredicted RBP9.52□□□□□ -0.89
CDC42BPA-210ENST00000462553 SHHQ15465 462 aa9.52□□□□□ -0.89
CDC42BPA-210ENST00000462553 C12orf60Q5U649 245 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms