RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 SGIP1Q9BQI5 828 aa14.23□□□□□ -0.13
COL4A6-204ENST00000461897 ZNF277Q9NRM2 450 aaPredicted RBP14.23□□□□□ -0.13
COL4A6-204ENST00000461897 IFNKQ9P0W0 207 aa14.23□□□□□ -0.13
COL4A6-204ENST00000461897 MORC2Q9Y6X9 1032 aaPredicted RBP14.23□□□□□ -0.13
COL4A6-204ENST00000461897 FER1L6Q2WGJ9 1857 aa14.23□□□□□ -0.13
COL4A6-204ENST00000461897 MYH8P13535 1937 aa14.23□□□□□ -0.13
COL4A6-204ENST00000461897 TSPY3P0CV98 308 aa14.23□□□□□ -0.13
COL4A6-204ENST00000461897 TSPY8P0CW00 308 aa14.23□□□□□ -0.13
COL4A6-204ENST00000461897 GUCY1A2P33402 732 aa14.23□□□□□ -0.13
COL4A6-204ENST00000461897 FUT2Q10981 343 aa14.23□□□□□ -0.13
COL4A6-204ENST00000461897 NFIAQ12857 509 aa14.23□□□□□ -0.13
COL4A6-204ENST00000461897 PPP2R5BQ15173 497 aa14.23□□□□□ -0.13
COL4A6-204ENST00000461897 RESP18Q5W5W9 173 aa14.23□□□□□ -0.13
COL4A6-204ENST00000461897 CRACR2BQ8N4Y2 399 aaPredicted RBP14.23□□□□□ -0.13
COL4A6-204ENST00000461897 TCP11L1Q9NUJ3 509 aa14.23□□□□□ -0.13
COL4A6-204ENST00000461897 FAM53CQ9NYF3 392 aa14.23□□□□□ -0.13
COL4A6-204ENST00000461897 PIM2Q9P1W9 311 aa14.23□□□□□ -0.13
COL4A6-204ENST00000461897 ZNF215Q9UL58 517 aaPredicted RBP14.23□□□□□ -0.13
COL4A6-204ENST00000461897 SIPA1L1O43166 1804 aa14.22□□□□□ -0.13
COL4A6-204ENST00000461897 SLU7O95391 586 aaKnown RBP14.22□□□□□ -0.13
COL4A6-204ENST00000461897 PLEKHA8P1O95397 391 aa14.22□□□□□ -0.13
COL4A6-204ENST00000461897 CALM1P0DP23 149 aa14.22□□□□□ -0.13
COL4A6-204ENST00000461897 CALM2P0DP24 149 aa14.22□□□□□ -0.13
COL4A6-204ENST00000461897 CALM3P0DP25 149 aa14.22□□□□□ -0.13
COL4A6-204ENST00000461897 SFPQP23246 707 aaKnown RBP eCLIP14.22□□□□□ -0.13
COL4A6-204ENST00000461897 SYKP43405 635 aa14.22□□□□□ -0.13
COL4A6-204ENST00000461897 GABPAQ06546 454 aa14.22□□□□□ -0.13
COL4A6-204ENST00000461897 KRT40Q6A162 431 aa14.22□□□□□ -0.13
COL4A6-204ENST00000461897 DGKHQ86XP1 1220 aa14.22□□□□□ -0.13
COL4A6-204ENST00000461897 ZNF444Q8N0Y2 327 aaPredicted RBP14.22□□□□□ -0.13
COL4A6-204ENST00000461897 CCDC82Q8N4S0 544 aa14.22□□□□□ -0.13
COL4A6-204ENST00000461897 ANKS1AQ92625 1134 aa14.22□□□□□ -0.13
COL4A6-204ENST00000461897 UPF1Q92900 1129 aaKnown RBP eCLIP14.22□□□□□ -0.13
COL4A6-204ENST00000461897 PPP1R13BQ96KQ4 1090 aa14.22□□□□□ -0.13
COL4A6-204ENST00000461897 ZNF287Q9HBT7 754 aa14.22□□□□□ -0.13
COL4A6-204ENST00000461897 SERPINA10Q9UK55 444 aa14.22□□□□□ -0.13
COL4A6-204ENST00000461897 UTRNP46939 3433 aa14.21□□□□□ -0.13
COL4A6-204ENST00000461897 CCP110O43303 1012 aa14.21□□□□□ -0.13
COL4A6-204ENST00000461897 NRDCO43847 1150 aa14.21□□□□□ -0.13
COL4A6-204ENST00000461897 SMC2O95347 1197 aa14.21□□□□□ -0.13
COL4A6-204ENST00000461897 FANCCQ00597 558 aa14.21□□□□□ -0.13
COL4A6-204ENST00000461897 SHC4Q6S5L8 630 aa14.21□□□□□ -0.13
COL4A6-204ENST00000461897 TMC6Q7Z403 805 aa14.21□□□□□ -0.13
COL4A6-204ENST00000461897 LARGE2Q8N3Y3 721 aa14.21□□□□□ -0.13
COL4A6-204ENST00000461897 PRDM10Q9NQV6 1147 aa14.21□□□□□ -0.13
COL4A6-204ENST00000461897 CBFA2T2O43439 604 aa14.21□□□□□ -0.14
COL4A6-204ENST00000461897 CUTAO60888 179 aa14.21□□□□□ -0.14
COL4A6-204ENST00000461897 KIF20AO95235 890 aa14.21□□□□□ -0.14
COL4A6-204ENST00000461897 GABPB1Q06547 395 aaPredicted RBP14.21□□□□□ -0.14
COL4A6-204ENST00000461897 NAA30Q147X3 362 aaPredicted RBP14.21□□□□□ -0.14
COL4A6-204ENST00000461897 SOGA3Q5TF21 947 aa14.21□□□□□ -0.14
COL4A6-204ENST00000461897 TMTC3Q6ZXV5 915 aa14.21□□□□□ -0.14
COL4A6-204ENST00000461897 TRIM22Q8IYM9 498 aa14.21□□□□□ -0.14
COL4A6-204ENST00000461897 ZNF592Q92610 1267 aa14.21□□□□□ -0.14
COL4A6-204ENST00000461897 RNF26Q9BY78 433 aaPredicted RBP14.21□□□□□ -0.14
COL4A6-204ENST00000461897 TMX1Q9H3N1 280 aa14.21□□□□□ -0.14
COL4A6-204ENST00000461897 RBM28Q9NW13 759 aaKnown RBP14.21□□□□□ -0.14
COL4A6-204ENST00000461897 TRMT1Q9NXH9 659 aaKnown RBP14.21□□□□□ -0.14
COL4A6-204ENST00000461897 SPDYE4A6NLX3 237 aa14.2□□□□□ -0.14
COL4A6-204ENST00000461897 DEXIO95424 95 aa14.2□□□□□ -0.14
COL4A6-204ENST00000461897 RBM5P52756 815 aaKnown RBP eCLIP14.2□□□□□ -0.14
COL4A6-204ENST00000461897 CACNB3P54284 484 aa14.2□□□□□ -0.14
COL4A6-204ENST00000461897 MYL5Q02045 173 aa14.2□□□□□ -0.14
COL4A6-204ENST00000461897 DALRD3Q5D0E6 543 aaKnown RBP14.2□□□□□ -0.14
COL4A6-204ENST00000461897 FCHSD1Q86WN1 690 aa14.2□□□□□ -0.14
COL4A6-204ENST00000461897 NEDD1Q8NHV4 660 aa14.2□□□□□ -0.14
COL4A6-204ENST00000461897 PLIN4Q96Q06 1357 aa14.19□□□□□ -0.14
COL4A6-204ENST00000461897 CNTNAP5Q8WYK1 1306 aa14.19□□□□□ -0.14
COL4A6-204ENST00000461897 PSMD14O00487 310 aa14.19□□□□□ -0.14
COL4A6-204ENST00000461897 RAD17O75943 681 aa14.19□□□□□ -0.14
COL4A6-204ENST00000461897 CCDC178Q5BJE1 867 aa14.19□□□□□ -0.14
COL4A6-204ENST00000461897 RSBN1LQ6PCB5 846 aaPredicted RBP14.19□□□□□ -0.14
COL4A6-204ENST00000461897 ZFPM1Q8IX07 1006 aa14.19□□□□□ -0.14
COL4A6-204ENST00000461897 PNMA1Q8ND90 353 aa14.19□□□□□ -0.14
COL4A6-204ENST00000461897 WASF1Q92558 559 aa14.19□□□□□ -0.14
COL4A6-204ENST00000461897 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.19□□□□□ -0.14
COL4A6-204ENST00000461897 VPS33BQ9H267 617 aa14.19□□□□□ -0.14
COL4A6-204ENST00000461897 KAT14Q9H8E8 782 aa14.19□□□□□ -0.14
COL4A6-204ENST00000461897 FAM198AQ9UFP1 575 aa14.19□□□□□ -0.14
COL4A6-204ENST00000461897 TAOK2Q9UL54 1235 aa14.19□□□□□ -0.14
COL4A6-204ENST00000461897 GREB1LQ9C091 1923 aaPredicted RBP14.19□□□□□ -0.14
COL4A6-204ENST00000461897 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.18□□□□□ -0.14
COL4A6-204ENST00000461897 VIL1P09327 827 aaKnown RBP14.18□□□□□ -0.14
COL4A6-204ENST00000461897 MARCKSP29966 332 aaPredicted RBP14.18□□□□□ -0.14
COL4A6-204ENST00000461897 PTGER2P43116 358 aa14.18□□□□□ -0.14
COL4A6-204ENST00000461897 PKN1Q16512 942 aa14.18□□□□□ -0.14
COL4A6-204ENST00000461897 KMT5BQ4FZB7 885 aa14.18□□□□□ -0.14
COL4A6-204ENST00000461897 SRBD1Q8N5C6 995 aaKnown RBP14.18□□□□□ -0.14
COL4A6-204ENST00000461897 CTCFLQ8NI51 663 aaPredicted RBP14.18□□□□□ -0.14
COL4A6-204ENST00000461897 SHISA4Q96DD7 197 aa14.18□□□□□ -0.14
COL4A6-204ENST00000461897 GMLQ99445 158 aa14.18□□□□□ -0.14
COL4A6-204ENST00000461897 IDI2Q9BXS1 227 aa14.18□□□□□ -0.14
COL4A6-204ENST00000461897 PPP1R1BQ9UD71 204 aaPredicted RBP14.18□□□□□ -0.14
COL4A6-204ENST00000461897 SERPINB13Q9UIV8 391 aa14.18□□□□□ -0.14
COL4A6-204ENST00000461897 STX8Q9UNK0 236 aa14.18□□□□□ -0.14
COL4A6-204ENST00000461897 PHLPP2Q6ZVD8 1323 aa14.18□□□□□ -0.14
COL4A6-204ENST00000461897 MYO3BQ8WXR4 1341 aa14.18□□□□□ -0.14
COL4A6-204ENST00000461897 BIN1O00499 593 aa14.18□□□□□ -0.14
COL4A6-204ENST00000461897 NOVP48745 357 aa14.18□□□□□ -0.14
COL4A6-204ENST00000461897 TRIM29Q14134 588 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms