RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 PLEKHM2Q8IWE5 1019 aa22.53■■□□□ 1.2
COL5A1-203ENST00000460264 SHCBP1Q8NEM2 672 aa22.53■■□□□ 1.2
COL5A1-203ENST00000460264 TRIM6-TRIM34B2RNG4 842 aa22.52■■□□□ 1.2
COL5A1-203ENST00000460264 TFRCP02786 760 aaKnown RBP22.52■■□□□ 1.2
COL5A1-203ENST00000460264 SAMD1Q6SPF0 538 aaPredicted RBP22.52■■□□□ 1.2
COL5A1-203ENST00000460264 CEP95Q96GE4 821 aa22.52■■□□□ 1.2
COL5A1-203ENST00000460264 OSBPL3Q9H4L5 887 aa22.52■■□□□ 1.2
COL5A1-203ENST00000460264 ADAMTS5Q9UNA0 930 aa22.52■■□□□ 1.2
COL5A1-203ENST00000460264 ZNFX1Q9P2E3 1918 aaKnown RBP22.51■■□□□ 1.19
COL5A1-203ENST00000460264 HOXC6P09630 235 aa22.51■■□□□ 1.19
COL5A1-203ENST00000460264 ERCC3P19447 782 aa22.51■■□□□ 1.19
COL5A1-203ENST00000460264 CACNB2Q08289 660 aaPredicted RBP22.51■■□□□ 1.19
COL5A1-203ENST00000460264 PLS1Q14651 629 aa22.51■■□□□ 1.19
COL5A1-203ENST00000460264 NEDD1Q8NHV4 660 aa22.51■■□□□ 1.19
COL5A1-203ENST00000460264 NUP88Q99567 741 aaPredicted RBP22.51■■□□□ 1.19
COL5A1-203ENST00000460264 MTMR4Q9NYA4 1195 aa22.51■■□□□ 1.19
COL5A1-203ENST00000460264 CLIP2Q9UDT6 1046 aa22.51■■□□□ 1.19
COL5A1-203ENST00000460264 PPP1R9AQ9ULJ8 1098 aa22.51■■□□□ 1.19
COL5A1-203ENST00000460264 F5H6K3 240 aa22.5■■□□□ 1.19
COL5A1-203ENST00000460264 NDUFB10O96000 172 aa22.5■■□□□ 1.19
COL5A1-203ENST00000460264 TSPY3P0CV98 308 aa22.5■■□□□ 1.19
COL5A1-203ENST00000460264 TSPY8P0CW00 308 aa22.5■■□□□ 1.19
COL5A1-203ENST00000460264 KLRC3Q07444 240 aa22.5■■□□□ 1.19
COL5A1-203ENST00000460264 NMIQ13287 307 aaPredicted RBP22.5■■□□□ 1.19
COL5A1-203ENST00000460264 TMEM132BQ14DG7 1078 aa22.5■■□□□ 1.19
COL5A1-203ENST00000460264 MCMDC2Q4G0Z9 681 aa22.5■■□□□ 1.19
COL5A1-203ENST00000460264 RILPL2Q969X0 211 aa22.5■■□□□ 1.19
COL5A1-203ENST00000460264 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.5■■□□□ 1.19
COL5A1-203ENST00000460264 ALPK3Q96L96 1907 aa22.5■■□□□ 1.19
COL5A1-203ENST00000460264 VWA5AO00534 786 aa22.49■■□□□ 1.19
COL5A1-203ENST00000460264 TTLL1O95922 423 aa22.49■■□□□ 1.19
COL5A1-203ENST00000460264 CTDSPL2Q05D32 466 aa22.49■■□□□ 1.19
COL5A1-203ENST00000460264 ALX1Q15699 326 aa22.49■■□□□ 1.19
COL5A1-203ENST00000460264 FAM47AQ5JRC9 791 aa22.49■■□□□ 1.19
COL5A1-203ENST00000460264 MKL1Q969V6 931 aa22.49■■□□□ 1.19
COL5A1-203ENST00000460264 MROH8Q9H579 483 aa22.49■■□□□ 1.19
COL5A1-203ENST00000460264 FLRT1Q9NZU1 646 aa22.49■■□□□ 1.19
COL5A1-203ENST00000460264 SYNPO2Q9UMS6 1093 aa22.49■■□□□ 1.19
COL5A1-203ENST00000460264 PLXNA1Q9UIW2 1896 aa22.48■■□□□ 1.19
COL5A1-203ENST00000460264 STRNO43815 780 aa22.48■■□□□ 1.19
COL5A1-203ENST00000460264 ADORA2AP29274 412 aa22.48■■□□□ 1.19
COL5A1-203ENST00000460264 TFAP4Q01664 338 aa22.48■■□□□ 1.19
COL5A1-203ENST00000460264 ZNF589Q86UQ0 364 aaPredicted RBP22.48■■□□□ 1.19
COL5A1-203ENST00000460264 NCAPG2Q86XI2 1143 aa22.48■■□□□ 1.19
COL5A1-203ENST00000460264 LRRC47Q8N1G4 583 aaKnown RBP22.48■■□□□ 1.19
COL5A1-203ENST00000460264 NPLOC4Q8TAT6 608 aa22.48■■□□□ 1.19
COL5A1-203ENST00000460264 HTATIP2Q9BUP3 242 aa22.48■■□□□ 1.19
COL5A1-203ENST00000460264 ANAPC4Q9UJX5 808 aa22.48■■□□□ 1.19
COL5A1-203ENST00000460264 LAMA4Q16363 1823 aa22.47■■□□□ 1.19
COL5A1-203ENST00000460264 CCND3P30281 292 aaPredicted RBP22.47■■□□□ 1.19
COL5A1-203ENST00000460264 ANKLE1Q8NAG6 615 aa22.47■■□□□ 1.19
COL5A1-203ENST00000460264 GMCL1P1Q8NEA9 526 aa22.47■■□□□ 1.19
COL5A1-203ENST00000460264 REPS2Q8NFH8 660 aa22.47■■□□□ 1.19
COL5A1-203ENST00000460264 SLF1Q9BQI6 1058 aa22.47■■□□□ 1.19
COL5A1-203ENST00000460264 ZNF214Q9UL59 606 aaPredicted RBP22.47■■□□□ 1.19
COL5A1-203ENST00000460264 ZMYM6O95789 1325 aa22.47■■□□□ 1.19
COL5A1-203ENST00000460264 CCDC171Q6TFL3 1326 aa22.47■■□□□ 1.19
COL5A1-203ENST00000460264 IRX6P78412 446 aaPredicted RBP22.46■■□□□ 1.19
COL5A1-203ENST00000460264 MFSD14CQ5VZR4 134 aa22.46■■□□□ 1.19
COL5A1-203ENST00000460264 DPP9Q86TI2 863 aa22.46■■□□□ 1.19
COL5A1-203ENST00000460264 ABRAQ8N0Z2 381 aa22.46■■□□□ 1.19
COL5A1-203ENST00000460264 DIS3LQ8TF46 1054 aaKnown RBP22.46■■□□□ 1.19
COL5A1-203ENST00000460264 INCENPQ9NQS7 918 aa22.46■■□□□ 1.19
COL5A1-203ENST00000460264 OGDHLQ9ULD0 1010 aa22.46■■□□□ 1.19
COL5A1-203ENST00000460264 TACC3Q9Y6A5 838 aa22.46■■□□□ 1.19
COL5A1-203ENST00000460264 SLC25A27O95847 323 aa22.45■■□□□ 1.18
COL5A1-203ENST00000460264 IGHA2P01877 340 aa22.45■■□□□ 1.18
COL5A1-203ENST00000460264 FGAP02671 866 aa22.45■■□□□ 1.18
COL5A1-203ENST00000460264 HSPD1P10809 573 aaKnown RBP22.45■■□□□ 1.18
COL5A1-203ENST00000460264 SDSP20132 328 aa22.45■■□□□ 1.18
COL5A1-203ENST00000460264 RIOX2Q8IUF8 465 aa22.45■■□□□ 1.18
COL5A1-203ENST00000460264 DPF3Q92784 378 aa22.45■■□□□ 1.18
COL5A1-203ENST00000460264 PAWRQ96IZ0 340 aaKnown RBP22.45■■□□□ 1.18
COL5A1-203ENST00000460264 TSPY2A6NKD2 308 aa22.44■■□□□ 1.18
COL5A1-203ENST00000460264 H0YGN5 161 aa22.44■■□□□ 1.18
COL5A1-203ENST00000460264 ORC4O43929 436 aa22.44■■□□□ 1.18
COL5A1-203ENST00000460264 COBLO75128 1261 aa22.44■■□□□ 1.18
COL5A1-203ENST00000460264 STAT3P40763 770 aa22.44■■□□□ 1.18
COL5A1-203ENST00000460264 MNX1P50219 401 aaPredicted RBP22.44■■□□□ 1.18
COL5A1-203ENST00000460264 OLFML2BQ68BL8 750 aa22.44■■□□□ 1.18
COL5A1-203ENST00000460264 PRPF38AQ8NAV1 312 aaKnown RBP22.44■■□□□ 1.18
COL5A1-203ENST00000460264 FGRP09769 529 aa22.43■■□□□ 1.18
COL5A1-203ENST00000460264 FCER1AP12319 257 aa22.43■■□□□ 1.18
COL5A1-203ENST00000460264 CYP2C19P33261 490 aa22.43■■□□□ 1.18
COL5A1-203ENST00000460264 PPP4R3BQ5MIZ7 849 aa22.43■■□□□ 1.18
COL5A1-203ENST00000460264 NECAB2Q7Z6G3 386 aa22.43■■□□□ 1.18
COL5A1-203ENST00000460264 IL17RBQ9NRM6 502 aa22.43■■□□□ 1.18
COL5A1-203ENST00000460264 NMT2O60551 498 aa22.42■■□□□ 1.18
COL5A1-203ENST00000460264 COPB2P35606 906 aa22.42■■□□□ 1.18
COL5A1-203ENST00000460264 SLFN13Q68D06 897 aa22.42■■□□□ 1.18
COL5A1-203ENST00000460264 LHX8Q68G74 356 aa22.42■■□□□ 1.18
COL5A1-203ENST00000460264 TEX13BQ9BXU2 312 aa22.42■■□□□ 1.18
COL5A1-203ENST00000460264 SLC5A4Q9NY91 659 aa22.42■■□□□ 1.18
COL5A1-203ENST00000460264 FEM1BQ9UK73 627 aa22.42■■□□□ 1.18
COL5A1-203ENST00000460264 STX8Q9UNK0 236 aa22.42■■□□□ 1.18
COL5A1-203ENST00000460264 RANBP6O60518 1105 aaKnown RBP22.41■■□□□ 1.18
COL5A1-203ENST00000460264 CYBAP13498 195 aa22.41■■□□□ 1.18
COL5A1-203ENST00000460264 PDE4AP27815 886 aa22.41■■□□□ 1.18
COL5A1-203ENST00000460264 MFAP1P55081 439 aaKnown RBP22.41■■□□□ 1.18
COL5A1-203ENST00000460264 TRPV1Q8NER1 839 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms