RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-221ENST00000456369 RUFY2Q8WXA3 655 aa11.78□□□□□ -0.52
CHEK2-221ENST00000456369 MARVELD3Q96A59 401 aa11.78□□□□□ -0.52
CHEK2-221ENST00000456369 FEZ1Q99689 392 aa11.78□□□□□ -0.52
CHEK2-221ENST00000456369 CPA4Q9UI42 421 aa11.78□□□□□ -0.52
CHEK2-221ENST00000456369 LOC285556D6RIA3 1793 aa11.77□□□□□ -0.52
CHEK2-221ENST00000456369 ATAD5Q96QE3 1844 aa11.77□□□□□ -0.52
CHEK2-221ENST00000456369 DPYSL4O14531 572 aa11.77□□□□□ -0.53
CHEK2-221ENST00000456369 NUDT7P0C024 238 aa11.77□□□□□ -0.53
CHEK2-221ENST00000456369 PCP11498 1178 aaKnown RBP11.77□□□□□ -0.53
CHEK2-221ENST00000456369 HAND2P61296 217 aa11.77□□□□□ -0.53
CHEK2-221ENST00000456369 TFAP4Q01664 338 aa11.77□□□□□ -0.53
CHEK2-221ENST00000456369 PTH1RQ03431 593 aa11.77□□□□□ -0.53
CHEK2-221ENST00000456369 PABPC4Q13310 644 aaKnown RBP eCLIP11.77□□□□□ -0.537e-6■□□□□ 8.5
CHEK2-221ENST00000456369 FAM47AQ5JRC9 791 aa11.77□□□□□ -0.53
CHEK2-221ENST00000456369 MKL1Q969V6 931 aa11.77□□□□□ -0.53
CHEK2-221ENST00000456369 CEP95Q96GE4 821 aa11.77□□□□□ -0.53
CHEK2-221ENST00000456369 VCPKMTQ9H867 229 aa11.77□□□□□ -0.53
CHEK2-221ENST00000456369 ARHGEF10LQ9HCE6 1279 aa11.77□□□□□ -0.53
CHEK2-221ENST00000456369 IL17RBQ9NRM6 502 aa11.77□□□□□ -0.53
CHEK2-221ENST00000456369 MTMR4Q9NYA4 1195 aa11.77□□□□□ -0.53
CHEK2-221ENST00000456369 NYAP2Q9P242 653 aa11.77□□□□□ -0.53
CHEK2-221ENST00000456369 PNMA3Q9UL41 463 aa11.77□□□□□ -0.53
CHEK2-221ENST00000456369 SYNPO2Q9UMS6 1093 aa11.77□□□□□ -0.53
CHEK2-221ENST00000456369 PTPRFP10586 1907 aa11.76□□□□□ -0.53
CHEK2-221ENST00000456369 ZNF213O14771 459 aa11.76□□□□□ -0.53
CHEK2-221ENST00000456369 CTGFP29279 349 aa11.76□□□□□ -0.53
CHEK2-221ENST00000456369 LACTBP83111 547 aaPredicted RBP11.76□□□□□ -0.53
CHEK2-221ENST00000456369 BECN1Q14457 450 aa11.76□□□□□ -0.53
CHEK2-221ENST00000456369 AKNAD1Q5T1N1 836 aa11.76□□□□□ -0.53
CHEK2-221ENST00000456369 CATSPERGQ6ZRH7 1159 aa11.76□□□□□ -0.53
CHEK2-221ENST00000456369 CTU1Q7Z7A3 348 aaKnown RBP11.76□□□□□ -0.53
CHEK2-221ENST00000456369 LPAR1Q92633 364 aa11.76□□□□□ -0.53
CHEK2-221ENST00000456369 MAP4K1Q92918 833 aa11.76□□□□□ -0.53
CHEK2-221ENST00000456369 P2RX7Q99572 595 aaKnown RBP11.76□□□□□ -0.53
CHEK2-221ENST00000456369 ESYT1Q9BSJ8 1104 aa11.76□□□□□ -0.53
CHEK2-221ENST00000456369 C22orf23Q9BZE7 217 aa11.76□□□□□ -0.53
CHEK2-221ENST00000456369 DAXXQ9UER7 740 aaPredicted RBP11.76□□□□□ -0.53
CHEK2-221ENST00000456369 CTNNA3Q9UI47 895 aa11.76□□□□□ -0.53
CHEK2-221ENST00000456369 USP17L15C9J2P7 530 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 USP17L13C9JLJ4 530 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 USP17L11C9JVI0 530 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 USP17L18D6R9N7 530 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 USP17L22D6RA61 530 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 USP17L17D6RBQ6 530 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 USP17L19D6RCP7 530 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 USP17L20D6RJB6 530 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 NMT2O60551 498 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 TTLL1O95922 423 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 TSPY3P0CV98 308 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 TSPY8P0CW00 308 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 OSBPP22059 807 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 GCLCP48506 637 aaPredicted RBP11.75□□□□□ -0.53
CHEK2-221ENST00000456369 RBM25P49756 843 aaKnown RBP11.75□□□□□ -0.53
CHEK2-221ENST00000456369 EMP3P54852 163 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 HERVK_113P62684 666 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 USP17L24Q0WX57 530 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 SPICE1Q8N0Z3 855 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 CD99L2Q8TCZ2 262 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 SMCR8Q8TEV9 937 aaPredicted RBP11.75□□□□□ -0.53
CHEK2-221ENST00000456369 ERO1AQ96HE7 468 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 ARHGAP39Q9C0H5 1083 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 RPAP3Q9H6T3 665 aaPredicted RBP11.75□□□□□ -0.53
CHEK2-221ENST00000456369 SH2D4AQ9H788 454 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 RBPJLQ9UBG7 517 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 MORF4L1Q9UBU8 362 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 GREB1LQ9C091 1923 aaPredicted RBP11.75□□□□□ -0.53
CHEK2-221ENST00000456369 NEDD4P46934 1319 aa11.75□□□□□ -0.53
CHEK2-221ENST00000456369 CENPFP49454 3210 aa11.74□□□□□ -0.53
CHEK2-221ENST00000456369 TSPY2A6NKD2 308 aa11.74□□□□□ -0.53
CHEK2-221ENST00000456369 F5H6K3 240 aa11.74□□□□□ -0.53
CHEK2-221ENST00000456369 RANBP6O60518 1105 aaKnown RBP11.74□□□□□ -0.53
CHEK2-221ENST00000456369 NT5C2P49902 561 aa11.74□□□□□ -0.53
CHEK2-221ENST00000456369 IRX3P78415 501 aaPredicted RBP11.74□□□□□ -0.53
CHEK2-221ENST00000456369 KLRC3Q07444 240 aa11.74□□□□□ -0.53
CHEK2-221ENST00000456369 IMMTQ16891 758 aaKnown RBP11.74□□□□□ -0.53
CHEK2-221ENST00000456369 FAM110CQ1W6H9 321 aa11.74□□□□□ -0.53
CHEK2-221ENST00000456369 LBX2Q6XYB7 198 aa11.74□□□□□ -0.53
CHEK2-221ENST00000456369 MFSD6Q6ZSS7 791 aa11.74□□□□□ -0.53
CHEK2-221ENST00000456369 OTOP1Q7RTM1 612 aa11.74□□□□□ -0.53
CHEK2-221ENST00000456369 ANKRD13CQ8N6S4 541 aa11.74□□□□□ -0.53
CHEK2-221ENST00000456369 GMCL1P1Q8NEA9 526 aa11.74□□□□□ -0.53
CHEK2-221ENST00000456369 KCNV2Q8TDN2 545 aa11.74□□□□□ -0.53
CHEK2-221ENST00000456369 MCOLN1Q9GZU1 580 aa11.74□□□□□ -0.53
CHEK2-221ENST00000456369 LSG1Q9H089 658 aaKnown RBP11.74□□□□□ -0.53
CHEK2-221ENST00000456369 RNF41Q9H4P4 317 aaPredicted RBP11.74□□□□□ -0.53
CHEK2-221ENST00000456369 TXNRD2Q9NNW7 524 aa11.74□□□□□ -0.53
CHEK2-221ENST00000456369 TCP11L1Q9NUJ3 509 aa11.74□□□□□ -0.53
CHEK2-221ENST00000456369 CLIP2Q9UDT6 1046 aa11.74□□□□□ -0.53
CHEK2-221ENST00000456369 WDR46O15213 610 aaKnown RBP11.73□□□□□ -0.53
CHEK2-221ENST00000456369 PEX10O60683 326 aa11.73□□□□□ -0.53
CHEK2-221ENST00000456369 NDUFB10O96000 172 aa11.73□□□□□ -0.53
CHEK2-221ENST00000456369 CYP21A2P08686 494 aa11.73□□□□□ -0.53
CHEK2-221ENST00000456369 ATP2B2Q01814 1243 aa11.73□□□□□ -0.53
CHEK2-221ENST00000456369 PKN2Q16513 984 aaKnown RBP11.73□□□□□ -0.53
CHEK2-221ENST00000456369 TNS4Q8IZW8 715 aa11.73□□□□□ -0.53
CHEK2-221ENST00000456369 TRIM47Q96LD4 638 aa11.73□□□□□ -0.53
CHEK2-221ENST00000456369 GOPCQ9HD26 462 aa11.73□□□□□ -0.53
CHEK2-221ENST00000456369 TAF6LQ9Y6J9 622 aa11.73□□□□□ -0.53
CHEK2-221ENST00000456369 SPDYE16A6NNV3 312 aaPredicted RBP11.72□□□□□ -0.53
CHEK2-221ENST00000456369 EPB41L2O43491 1005 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms