RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 PLA2G4AP47712 749 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 SMTNP53814 917 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 ESRRGP62508 458 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 ZBED6P86452 979 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 CCZ1BP86790 482 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 CCZ1P86791 482 aaPredicted RBP5.51□□□□□ -1.53
PCDH9-203ENST00000456367 STRN3Q13033 797 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 NAA30Q147X3 362 aaPredicted RBP5.51□□□□□ -1.53
PCDH9-203ENST00000456367 CCDC144BQ3MJ40 725 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 TTC38Q5R3I4 469 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 ANKRD13DQ6ZTN6 518 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 VTI1AQ96AJ9 217 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 GRAMD1AQ96CP6 724 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 FHOD1Q9Y613 1164 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 MYOM2P54296 1465 aa5.51□□□□□ -1.53
PCDH9-203ENST00000456367 ARHGEF10O15013 1369 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 MAFGO15525 162 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 PPP1R37O75864 691 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 LMNB2Q03252 620 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 RBL2Q08999 1139 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 MKRN3Q13064 507 aaKnown RBP5.5□□□□□ -1.53
PCDH9-203ENST00000456367 PDCLQ13371 301 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 C2CD5Q86YS7 1000 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 NOSTRINQ8IVI9 506 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 TRMT44Q8IYL2 757 aaKnown RBP5.5□□□□□ -1.53
PCDH9-203ENST00000456367 APPBP2Q92624 585 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 EPB41L5Q9HCM4 733 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.5□□□□□ -1.53
PCDH9-203ENST00000456367 AMOTL2Q9Y2J4 779 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 MBD5Q9P267 1494 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 SBNO1A3KN83 1393 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 ARHGAP10A1A4S6 786 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 TRAF5O00463 557 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 MAPK13O15264 365 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 EPB41P11171 864 aaKnown RBP5.5□□□□□ -1.53
PCDH9-203ENST00000456367 RANBP1P43487 201 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 GYS2P54840 703 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 ARID5AQ03989 594 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 MYO1EQ12965 1108 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 RCSD1Q6JBY9 416 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 LRRC8CQ8TDW0 803 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 CUL5Q93034 780 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 ZBTB9Q96C00 473 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 CALR3Q96L12 384 aaKnown RBP5.5□□□□□ -1.53
PCDH9-203ENST00000456367 RMDN2Q96LZ7 410 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 FGD4Q96M96 766 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 KIF2CQ99661 725 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 DRC3Q9H069 523 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 CHCHD3Q9NX63 227 aaKnown RBP5.5□□□□□ -1.53
PCDH9-203ENST00000456367 ASIC3Q9UHC3 531 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 ITGB1BP2Q9UKP3 347 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 DIS3Q9Y2L1 958 aaKnown RBP5.5□□□□□ -1.53
PCDH9-203ENST00000456367 ADGBQ8N7X0 1667 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 GRID2IPA4D2P6 1211 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 TSPY2A6NKD2 308 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 PGRMC1O00264 195 aaKnown RBP5.5□□□□□ -1.53
PCDH9-203ENST00000456367 SPOPO43791 374 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 LDHCP07864 332 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 KRT15P19012 456 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 PHBP35232 272 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 INF2Q27J81 1249 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 TYW1BQ6NUM6 668 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 SLF2Q8IX21 1173 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 SYCP3Q8IZU3 236 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 TBC1D22AQ8WUA7 517 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 KIFAP3Q92845 792 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 SGSM3Q96HU1 749 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 DHTKD1Q96HY7 919 aaPredicted RBP5.5□□□□□ -1.53
PCDH9-203ENST00000456367 ATP6V1G3Q96LB4 118 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 FAM227BQ96M60 508 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 TEX13AQ9BXU3 409 aaPredicted RBP5.5□□□□□ -1.53
PCDH9-203ENST00000456367 CHPF2Q9P2E5 772 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 SATB2Q9UPW6 733 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.5□□□□□ -1.53
PCDH9-203ENST00000456367 SCINQ9Y6U3 715 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 YEATS2Q9ULM3 1422 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 PASKQ96RG2 1323 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 KCNK3O14649 394 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 STARD3NLO95772 234 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 PPP2R2AP63151 447 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 CCDC14Q49A88 953 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 LRIG3Q6UXM1 1119 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 RRAGAQ7L523 313 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 UBE3BQ7Z3V4 1068 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 CCDC13Q8IYE1 715 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 CCDC105Q8IYK2 499 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 CFAP61Q8NHU2 1237 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 NEK9Q8TD19 979 aa5.5□□□□□ -1.53
PCDH9-203ENST00000456367 CALUO43852 315 aaPredicted RBP5.49□□□□□ -1.53
PCDH9-203ENST00000456367 SNUPNO95149 360 aaKnown RBP5.49□□□□□ -1.53
PCDH9-203ENST00000456367 SNRPA1P09661 255 aaKnown RBP5.49□□□□□ -1.53
PCDH9-203ENST00000456367 USP5P45974 858 aa5.49□□□□□ -1.53
PCDH9-203ENST00000456367 TBC1D1Q86TI0 1168 aaPredicted RBP5.49□□□□□ -1.53
PCDH9-203ENST00000456367 PHACTR3Q96KR7 559 aa5.49□□□□□ -1.53
PCDH9-203ENST00000456367 CRNKL1Q9BZJ0 848 aaKnown RBP5.49□□□□□ -1.53
PCDH9-203ENST00000456367 RWDD2AQ9UIY3 292 aa5.49□□□□□ -1.53
PCDH9-203ENST00000456367 ADGRG1Q9Y653 693 aa5.49□□□□□ -1.53
PCDH9-203ENST00000456367 ASXL2Q76L83 1435 aa5.49□□□□□ -1.53
PCDH9-203ENST00000456367 ZMYM6O95789 1325 aa5.49□□□□□ -1.53
PCDH9-203ENST00000456367 MAGI2Q86UL8 1455 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms