RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 GOLGA6L22H0YM25 854 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 PDPK1O15530 556 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 ATP8B1O43520 1251 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 DNAJC6O75061 913 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 RTN2O75298 545 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 PPFIA2O75334 1257 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 CDC45O75419 566 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 B3GALT4O96024 378 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 ARAFP10398 606 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 IMPDH2P12268 514 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 SKILP12757 684 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 LMNB1P20700 586 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 NME2P22392 152 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 ALDH1B1P30837 517 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 MAP2K2P36507 400 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 BAG6P46379 1132 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 ZNF157P51786 506 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 GYS2P54840 703 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 CORO7P57737 925 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 NUCB2P80303 420 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 SARNPP82979 210 aaKnown RBP4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 ATP11AP98196 1134 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 CLCQ05315 142 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 PPP2R3AQ06190 1150 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 TRAF1Q13077 416 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 SEPT6Q14141 434 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 ZSCAN23Q3MJ62 389 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 TTC31Q49AM3 519 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 REC114Q7Z4M0 266 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 MORC1Q86VD1 984 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 DRAXINQ8NBI3 349 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 CCDC26Q8TAB7 109 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 GOLGA5Q8TBA6 731 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 APPBP2Q92624 585 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 MIEF2Q96C03 454 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 POP1Q99575 1024 aaKnown RBP4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 KIF2CQ99661 725 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 TNKS2Q9H2K2 1166 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 RANBP17Q9H2T7 1088 aaKnown RBP4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 CLEC4MQ9H2X3 399 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 TMX1Q9H3N1 280 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 DEF6Q9H4E7 631 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 METTL14Q9HCE5 456 aaKnown RBP4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 ST7Q9NRC1 585 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 TMEM260Q9NX78 707 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 CWC15Q9P013 229 aaKnown RBP4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 SUN2Q9UH99 717 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 LCMT1Q9UIC8 334 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 KLF15Q9UIH9 416 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 ZNRF3Q9ULT6 936 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 RRP15Q9Y3B9 282 aaKnown RBP4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 CLTCL1P53675 1640 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 BIVM-ERCC5R4GMW8 1640 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 PARD3Q8TEW0 1356 aa4.23□□□□□ -1.73
HMGB3P8-201ENST00000449709 ZNF521Q96K83 1311 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 FAM135AQ9P2D6 1515 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 ZRANB2O95218 330 aaKnown RBP eCLIP4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 TPM3P06753 285 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 FURINP09958 794 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 DGKGP49619 791 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 MRPL12P52815 198 aaKnown RBP4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 CASP7P55210 303 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 RWDD2BP57060 319 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 TBC1D8BQ0IIM8 1120 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 IFRD2Q12894 506 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 LRRC14Q15048 493 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 PDCD2Q16342 344 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 ZNF423Q2M1K9 1284 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 TBC1D25Q3MII6 688 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 ARSHQ5FYA8 562 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 FAM182BQ5T319 152 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 FBXW10Q5XX13 1052 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 GK5Q6ZS86 529 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 HFE2Q6ZVN8 426 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 KIAA0907Q7Z7F0 614 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 FCHSD1Q86WN1 690 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 LSRQ86X29 649 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 HOMER1Q86YM7 354 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 RBM12BQ8IXT5 1001 aaKnown RBP4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 EFCAB13Q8IY85 973 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 ANKRD20A12PQ8NF67 263 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 STK35Q8TDR2 534 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 PPM1EQ8WY54 764 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 BSNDQ8WZ55 320 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 GAL3ST3Q96A11 431 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 UTP14AQ9BVJ6 771 aaKnown RBP4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 EHMT1Q9H9B1 1298 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 KCND1Q9NSA2 647 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 LMBRD1Q9NUN5 540 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 SYNPO2Q9UMS6 1093 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 MAPK8IP1Q9UQF2 711 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 ANKRD30AQ9BXX3 1397 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 ARHGAP35Q9NRY4 1499 aa4.22□□□□□ -1.73
HMGB3P8-201ENST00000449709 ABCA10Q8WWZ4 1543 aa4.21□□□□□ -1.73
HMGB3P8-201ENST00000449709 KDM5DQ9BY66 1539 aa4.21□□□□□ -1.73
HMGB3P8-201ENST00000449709 TMCO5BA8MYB1 307 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 C1QTNF9BB2RNN3 333 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 H0YHG0 523 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 GNB5O14775 395 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 KINO60870 393 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms