RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 CREBZFQ9NS37 354 aa17.07■□□□□ 0.32
SHANK2-210ENST00000449116 RBM28Q9NW13 759 aaKnown RBP17.07■□□□□ 0.32
SHANK2-210ENST00000449116 TMOD4Q9NZQ9 345 aa17.07■□□□□ 0.32
SHANK2-210ENST00000449116 CCDC196A0A1B0GTZ2 297 aa17.06■□□□□ 0.32
SHANK2-210ENST00000449116 BMP3P12645 472 aa17.06■□□□□ 0.32
SHANK2-210ENST00000449116 SCRN1Q12765 414 aa17.06■□□□□ 0.32
SHANK2-210ENST00000449116 SNAPC2Q13487 334 aa17.06■□□□□ 0.32
SHANK2-210ENST00000449116 DGKZQ13574 1117 aa17.06■□□□□ 0.32
SHANK2-210ENST00000449116 CCDC96Q2M329 555 aa17.06■□□□□ 0.32
SHANK2-210ENST00000449116 ASPRV1Q53RT3 343 aa17.06■□□□□ 0.32
SHANK2-210ENST00000449116 MAD2L2Q9UI95 211 aa17.06■□□□□ 0.32
SHANK2-210ENST00000449116 FRMPD2Q68DX3 1309 aaPredicted RBP17.05■□□□□ 0.32
SHANK2-210ENST00000449116 PALM3A6NDB9 673 aaPredicted RBP17.05■□□□□ 0.32
SHANK2-210ENST00000449116 WDR46O15213 610 aaKnown RBP17.05■□□□□ 0.32
SHANK2-210ENST00000449116 SLC10A3P09131 477 aa17.05■□□□□ 0.32
SHANK2-210ENST00000449116 VCAM1P19320 739 aa17.05■□□□□ 0.32
SHANK2-210ENST00000449116 CDC27P30260 824 aa17.05■□□□□ 0.32
SHANK2-210ENST00000449116 GTF2A2P52657 109 aa17.05■□□□□ 0.32
SHANK2-210ENST00000449116 ZNF543Q08ER8 600 aa17.05■□□□□ 0.32
SHANK2-210ENST00000449116 GPATCH4Q5T3I0 446 aaKnown RBP17.05■□□□□ 0.32
SHANK2-210ENST00000449116 NECAB1Q8N987 351 aa17.05■□□□□ 0.32
SHANK2-210ENST00000449116 PROCA1Q8NCQ7 364 aaPredicted RBP17.05■□□□□ 0.32
SHANK2-210ENST00000449116 CCDC102AQ96A19 550 aa17.05■□□□□ 0.32
SHANK2-210ENST00000449116 CHMP4CQ96CF2 233 aa17.05■□□□□ 0.32
SHANK2-210ENST00000449116 FAM217BQ9NTX9 383 aaPredicted RBP17.05■□□□□ 0.32
SHANK2-210ENST00000449116 DHX16O60231 1041 aaKnown RBP17.04■□□□□ 0.32
SHANK2-210ENST00000449116 GOLGA8HP0CJ92 632 aa17.04■□□□□ 0.32
SHANK2-210ENST00000449116 ADD1P35611 737 aaKnown RBP17.04■□□□□ 0.32
SHANK2-210ENST00000449116 GNAQP50148 359 aa17.04■□□□□ 0.32
SHANK2-210ENST00000449116 ST3GAL1Q11201 340 aa17.04■□□□□ 0.32
SHANK2-210ENST00000449116 MKRN3Q13064 507 aaKnown RBP17.04■□□□□ 0.32
SHANK2-210ENST00000449116 FAM83BQ5T0W9 1011 aa17.04■□□□□ 0.32
SHANK2-210ENST00000449116 KCTD1Q719H9 257 aa17.04■□□□□ 0.32
SHANK2-210ENST00000449116 FASTKD5Q7L8L6 764 aaKnown RBP17.04■□□□□ 0.32
SHANK2-210ENST00000449116 CCDC83Q8IWF9 413 aa17.04■□□□□ 0.32
SHANK2-210ENST00000449116 STAG2Q8N3U4 1231 aa17.04■□□□□ 0.32
SHANK2-210ENST00000449116 NUP88Q99567 741 aaPredicted RBP17.04■□□□□ 0.32
SHANK2-210ENST00000449116 LZTS2Q9BRK4 669 aa17.04■□□□□ 0.32
SHANK2-210ENST00000449116 NCOA5Q9HCD5 579 aaKnown RBP17.04■□□□□ 0.32
SHANK2-210ENST00000449116 ISY1Q9ULR0 285 aaKnown RBP17.04■□□□□ 0.32
SHANK2-210ENST00000449116 RASSF10A6NK89 507 aa17.03■□□□□ 0.32
SHANK2-210ENST00000449116 CPLX1O14810 134 aa17.03■□□□□ 0.32
SHANK2-210ENST00000449116 CETPP11597 493 aa17.03■□□□□ 0.32
SHANK2-210ENST00000449116 CPLX2Q6PUV4 134 aaKnown RBP17.03■□□□□ 0.32
SHANK2-210ENST00000449116 GADL1Q6ZQY3 521 aa17.03■□□□□ 0.32
SHANK2-210ENST00000449116 TMTC3Q6ZXV5 915 aa17.03■□□□□ 0.32
SHANK2-210ENST00000449116 GPCPD1Q9NPB8 672 aa17.03■□□□□ 0.32
SHANK2-210ENST00000449116 PTPRFP10586 1907 aa17.02■□□□□ 0.32
SHANK2-210ENST00000449116 FAM155AB1AL88 458 aaPredicted RBP17.02■□□□□ 0.32
SHANK2-210ENST00000449116 TMEM232C9JQI7 657 aa17.02■□□□□ 0.32
SHANK2-210ENST00000449116 KLRF2D3W0D1 207 aa17.02■□□□□ 0.32
SHANK2-210ENST00000449116 PLEKHA8P1O95397 391 aa17.02■□□□□ 0.32
SHANK2-210ENST00000449116 CUL4AQ13619 759 aa17.02■□□□□ 0.32
SHANK2-210ENST00000449116 MOGSQ13724 837 aa17.02■□□□□ 0.32
SHANK2-210ENST00000449116 PAXIP1Q6ZW49 1069 aaPredicted RBP17.02■□□□□ 0.32
SHANK2-210ENST00000449116 MS4A4AQ96JQ5 239 aa17.02■□□□□ 0.32
SHANK2-210ENST00000449116 RPAP3Q9H6T3 665 aaPredicted RBP17.02■□□□□ 0.32
SHANK2-210ENST00000449116 FEM1BQ9UK73 627 aa17.02■□□□□ 0.32
SHANK2-210ENST00000449116 LOC285556D6RIA3 1793 aa17.02■□□□□ 0.31
SHANK2-210ENST00000449116 CCL15-CCL14A0A0B4J2E2 113 aa17.01■□□□□ 0.31
SHANK2-210ENST00000449116 PLA2G6O60733 806 aa17.01■□□□□ 0.31
SHANK2-210ENST00000449116 CDKL5O76039 1030 aa17.01■□□□□ 0.31
SHANK2-210ENST00000449116 SMARCA1P28370 1054 aa17.01■□□□□ 0.31
SHANK2-210ENST00000449116 STAT2P52630 851 aa17.01■□□□□ 0.31
SHANK2-210ENST00000449116 NTRK3Q16288 839 aa17.01■□□□□ 0.31
SHANK2-210ENST00000449116 CCL15Q16663 113 aa17.01■□□□□ 0.31
SHANK2-210ENST00000449116 DEFB115Q30KQ5 88 aa17.01■□□□□ 0.31
SHANK2-210ENST00000449116 TREML2Q5T2D2 321 aa17.01■□□□□ 0.31
SHANK2-210ENST00000449116 TTBK2Q6IQ55 1244 aa17.01■□□□□ 0.31
SHANK2-210ENST00000449116 BTNL9Q6UXG8 535 aa17.01■□□□□ 0.31
SHANK2-210ENST00000449116 TANGO6Q9C0B7 1094 aa17.01■□□□□ 0.31
SHANK2-210ENST00000449116 AGTPBP1Q9UPW5 1226 aa17.01■□□□□ 0.31
SHANK2-210ENST00000449116 MANSC4A6NHS7 340 aaPredicted RBP17■□□□□ 0.31
SHANK2-210ENST00000449116 USP17L15C9J2P7 530 aa17■□□□□ 0.31
SHANK2-210ENST00000449116 USP17L13C9JLJ4 530 aa17■□□□□ 0.31
SHANK2-210ENST00000449116 USP17L11C9JVI0 530 aa17■□□□□ 0.31
SHANK2-210ENST00000449116 USP17L18D6R9N7 530 aa17■□□□□ 0.31
SHANK2-210ENST00000449116 USP17L22D6RA61 530 aa17■□□□□ 0.31
SHANK2-210ENST00000449116 USP17L17D6RBQ6 530 aa17■□□□□ 0.31
SHANK2-210ENST00000449116 USP17L19D6RCP7 530 aa17■□□□□ 0.31
SHANK2-210ENST00000449116 USP17L20D6RJB6 530 aa17■□□□□ 0.31
SHANK2-210ENST00000449116 IFNAR1P17181 557 aa17■□□□□ 0.31
SHANK2-210ENST00000449116 HOXA7P31268 230 aaPredicted RBP17■□□□□ 0.31
SHANK2-210ENST00000449116 USP17L24Q0WX57 530 aa17■□□□□ 0.31
SHANK2-210ENST00000449116 IKQ13123 557 aaPredicted RBP17■□□□□ 0.31
SHANK2-210ENST00000449116 IFFO2Q5TF58 517 aa17■□□□□ 0.31
SHANK2-210ENST00000449116 CYP4F22Q6NT55 531 aa17■□□□□ 0.31
SHANK2-210ENST00000449116 CATSPERGQ6ZRH7 1159 aa17■□□□□ 0.31
SHANK2-210ENST00000449116 FAM160B2Q86V87 743 aa17■□□□□ 0.31
SHANK2-210ENST00000449116 CMTR1Q8N1G2 835 aaKnown RBP17■□□□□ 0.31
SHANK2-210ENST00000449116 SRBD1Q8N5C6 995 aaKnown RBP17■□□□□ 0.31
SHANK2-210ENST00000449116 CHURC1Q8WUH1 139 aa17■□□□□ 0.31
SHANK2-210ENST00000449116 SLF1Q9BQI6 1058 aa17■□□□□ 0.31
SHANK2-210ENST00000449116 LLPHQ9BRT6 129 aaKnown RBP17■□□□□ 0.31
SHANK2-210ENST00000449116 SPZ1Q9BXG8 430 aa17■□□□□ 0.31
SHANK2-210ENST00000449116 UBA5Q9GZZ9 404 aa17■□□□□ 0.31
SHANK2-210ENST00000449116 CNTNAP5Q8WYK1 1306 aa16.99■□□□□ 0.31
SHANK2-210ENST00000449116 TESPA1A2RU30 521 aaPredicted RBP16.99■□□□□ 0.31
SHANK2-210ENST00000449116 FLOT1O75955 427 aa16.99■□□□□ 0.31
SHANK2-210ENST00000449116 CTDNEP1O95476 244 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms