RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 BICDL1Q6ZP65 573 aa11.94□□□□□ -0.5
LINC00342-202ENST00000448494 ERICH1Q86X53 443 aa11.94□□□□□ -0.5
LINC00342-202ENST00000448494 UNC5CLQ8IV45 518 aa11.94□□□□□ -0.5
LINC00342-202ENST00000448494 CAVIN3Q969G5 261 aa11.94□□□□□ -0.5
LINC00342-202ENST00000448494 NDNQ99608 321 aa11.94□□□□□ -0.5
LINC00342-202ENST00000448494 COL3A1P02461 1466 aaPredicted RBP11.94□□□□□ -0.5
LINC00342-202ENST00000448494 FLOT1O75955 427 aa11.94□□□□□ -0.5
LINC00342-202ENST00000448494 EPHB4P54760 987 aa11.94□□□□□ -0.5
LINC00342-202ENST00000448494 MTF1Q14872 753 aa11.94□□□□□ -0.5
LINC00342-202ENST00000448494 ANO7Q6IWH7 933 aa11.94□□□□□ -0.5
LINC00342-202ENST00000448494 CD302Q8IX05 232 aa11.94□□□□□ -0.5
LINC00342-202ENST00000448494 TSPYL6Q8N831 410 aa11.94□□□□□ -0.5
LINC00342-202ENST00000448494 ERMNQ8TAM6 284 aa11.94□□□□□ -0.5
LINC00342-202ENST00000448494 KCNMB3Q9NPA1 279 aa11.94□□□□□ -0.5
LINC00342-202ENST00000448494 MAST1Q9Y2H9 1570 aa11.94□□□□□ -0.5
LINC00342-202ENST00000448494 SOWAHDA6NJG2 315 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 HMGB1P1B2RPK0 211 aaPredicted RBP11.93□□□□□ -0.5
LINC00342-202ENST00000448494 AKR1B15C9JRZ8 316 aaPredicted RBP11.93□□□□□ -0.5
LINC00342-202ENST00000448494 H3BQV1 296 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 DTNBO60941 627 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 FAM200BP0CF97 657 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 POLE2P56282 527 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 CBX3Q13185 183 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 IFFO2Q5TF58 517 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 ADALQ6DHV7 355 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 RAD9BQ6WBX8 426 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 TMEM110Q86TL2 294 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 SLF2Q8IX21 1173 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 GSPT2Q8IYD1 628 aaKnown RBP11.93□□□□□ -0.5
LINC00342-202ENST00000448494 HELBQ8NG08 1087 aaPredicted RBP11.93□□□□□ -0.5
LINC00342-202ENST00000448494 KLHDC4Q8TBB5 520 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 SPIRE2Q8WWL2 714 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 FGD4Q96M96 766 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 VCX3BQ9H321 246 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 VCX3AQ9NNX9 186 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 SLC12A4Q9UP95 1085 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 NEDD4P46934 1319 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 GSTA2P09210 222 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 CLTAP09496 248 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 ATP2A2P16615 1042 aaKnown RBP11.93□□□□□ -0.5
LINC00342-202ENST00000448494 SH3BGRP55822 239 aaPredicted RBP11.93□□□□□ -0.5
LINC00342-202ENST00000448494 CEBPZQ03701 1054 aaKnown RBP11.93□□□□□ -0.5
LINC00342-202ENST00000448494 ADCY1Q08828 1119 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 KIF5AQ12840 1032 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 TWISTNBQ3B726 338 aaPredicted RBP11.93□□□□□ -0.5
LINC00342-202ENST00000448494 SH2D4BQ5SQS7 431 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 KLHL10Q6JEL2 608 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 SH2D3CQ8N5H7 860 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 SMC1BQ8NDV3 1235 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 PPP2R3CQ969Q6 453 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 MTA3Q9BTC8 594 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 VCXQ9H320 206 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 LUC7LQ9NQ29 371 aaKnown RBP11.93□□□□□ -0.5
LINC00342-202ENST00000448494 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.93□□□□□ -0.5
LINC00342-202ENST00000448494 TBC1D7Q9P0N9 293 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 THRAP3Q9Y2W1 955 aaKnown RBP11.93□□□□□ -0.5
LINC00342-202ENST00000448494 LRRC42Q9Y546 428 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 OVOS2A0A0G2JMS6 1433 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 OVOS2A0A0J9YW53 1432 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 OVOS2Q6IE36 1432 aa11.93□□□□□ -0.5
LINC00342-202ENST00000448494 FER1L4A9Z1Z3 1794 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 TRAPPC3O43617 180 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 EVI5O60447 810 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 TSPY4P0CV99 314 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 TSPY10P0CW01 314 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 PSMA5P28066 241 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 STAT6P42226 847 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 ME1P48163 572 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 LMNB2Q03252 620 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 CLPPQ16740 277 aaPredicted RBP11.92□□□□□ -0.5
LINC00342-202ENST00000448494 ADCK5Q3MIX3 580 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 C16orf87Q6PH81 154 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 OLFML1Q6UWY5 402 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 SYNE3Q6ZMZ3 975 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 PNMA8AQ86V59 439 aaPredicted RBP11.92□□□□□ -0.5
LINC00342-202ENST00000448494 IFT43Q96FT9 208 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 PANK4Q9NVE7 773 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 ZNHIT6Q9NWK9 470 aaKnown RBP11.92□□□□□ -0.5
LINC00342-202ENST00000448494 CTNNAL1Q9UBT7 734 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 SLC4A7Q9Y6M7 1214 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 IQGAP3Q86VI3 1631 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 CDC42BPBQ9Y5S2 1711 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 KRT38O76015 456 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 ZKSCAN1P17029 563 aaPredicted RBP11.92□□□□□ -0.5
LINC00342-202ENST00000448494 BYSLQ13895 437 aaKnown RBP11.92□□□□□ -0.5
LINC00342-202ENST00000448494 GKAP1Q5VSY0 366 aaPredicted RBP11.92□□□□□ -0.5
LINC00342-202ENST00000448494 NAA16Q6N069 864 aaPredicted RBP11.92□□□□□ -0.5
LINC00342-202ENST00000448494 SEPT14Q6ZU15 432 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 BRF1Q92994 677 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 MMS19Q96T76 1030 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 GPCPD1Q9NPB8 672 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 CEP131Q9UPN4 1083 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 POGZQ7Z3K3 1410 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 UGGT1Q9NYU2 1555 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 MYO3AQ8NEV4 1616 aa11.92□□□□□ -0.5
LINC00342-202ENST00000448494 CCT8L1PA6NM43 557 aa11.91□□□□□ -0.5
LINC00342-202ENST00000448494 PSMD14O00487 310 aa11.91□□□□□ -0.5
LINC00342-202ENST00000448494 USO1O60763 962 aaKnown RBP11.91□□□□□ -0.5
LINC00342-202ENST00000448494 SP100P23497 879 aaPredicted RBP11.91□□□□□ -0.5
LINC00342-202ENST00000448494 TNFRSF8P28908 595 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms