RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 GP6Q9HCN6 339 aa6.42□□□□□ -1.38
HMGB1P16-201ENST00000447155 WHRNQ9P202 907 aa6.42□□□□□ -1.38
HMGB1P16-201ENST00000447155 FBXL21Q9UKT6 434 aa6.42□□□□□ -1.38
HMGB1P16-201ENST00000447155 CNTNAP4Q9C0A0 1308 aa6.42□□□□□ -1.38
HMGB1P16-201ENST00000447155 GNAT3A8MTJ3 354 aa6.41□□□□□ -1.38
HMGB1P16-201ENST00000447155 LRRN2O75325 713 aa6.41□□□□□ -1.38
HMGB1P16-201ENST00000447155 CBX7O95931 251 aa6.41□□□□□ -1.38
HMGB1P16-201ENST00000447155 HSD3B2P26439 372 aa6.41□□□□□ -1.38
HMGB1P16-201ENST00000447155 CPSF6Q16630 551 aaKnown RBP eCLIP6.41□□□□□ -1.38
HMGB1P16-201ENST00000447155 SHISA5Q8N114 240 aa6.41□□□□□ -1.38
HMGB1P16-201ENST00000447155 ZNF513Q8N8E2 541 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P16-201ENST00000447155 DTWD2Q8NBA8 298 aa6.41□□□□□ -1.38
HMGB1P16-201ENST00000447155 PIWIL2Q8TC59 973 aaKnown RBP6.41□□□□□ -1.38
HMGB1P16-201ENST00000447155 Q96M66 194 aa6.41□□□□□ -1.38
HMGB1P16-201ENST00000447155 ATG3Q9NT62 314 aa6.41□□□□□ -1.38
HMGB1P16-201ENST00000447155 FHOD1Q9Y613 1164 aa6.41□□□□□ -1.38
HMGB1P16-201ENST00000447155 IGLV1-40P01703 118 aa6.4□□□□□ -1.38
HMGB1P16-201ENST00000447155 FSTP19883 344 aa6.4□□□□□ -1.38
HMGB1P16-201ENST00000447155 DOC2BQ14184 412 aa6.4□□□□□ -1.38
HMGB1P16-201ENST00000447155 LONRF2Q1L5Z9 754 aa6.4□□□□□ -1.38
HMGB1P16-201ENST00000447155 MFSD4AQ8N468 514 aa6.4□□□□□ -1.38
HMGB1P16-201ENST00000447155 RCC1LQ96I51 464 aaKnown RBP6.4□□□□□ -1.38
HMGB1P16-201ENST00000447155 OSBPL1AQ9BXW6 950 aa6.4□□□□□ -1.38
HMGB1P16-201ENST00000447155 PRDM14Q9GZV8 571 aa6.4□□□□□ -1.38
HMGB1P16-201ENST00000447155 LRP2BPQ9P2M1 347 aa6.4□□□□□ -1.38
HMGB1P16-201ENST00000447155 APEX2Q9UBZ4 518 aa6.4□□□□□ -1.38
HMGB1P16-201ENST00000447155 SUGT1Q9Y2Z0 365 aa6.4□□□□□ -1.38
HMGB1P16-201ENST00000447155 CAPN6Q9Y6Q1 641 aa6.4□□□□□ -1.38
HMGB1P16-201ENST00000447155 PRR33A8MZF0 331 aa6.39□□□□□ -1.39
HMGB1P16-201ENST00000447155 WDR64B1ANS9 1081 aa6.39□□□□□ -1.39
HMGB1P16-201ENST00000447155 ZNF445P59923 1031 aa6.39□□□□□ -1.39
HMGB1P16-201ENST00000447155 SNW1Q13573 536 aaKnown RBP6.39□□□□□ -1.39
HMGB1P16-201ENST00000447155 ZC3H12BQ5HYM0 836 aaKnown RBP6.39□□□□□ -1.39
HMGB1P16-201ENST00000447155 NOL9Q5SY16 702 aaKnown RBP6.39□□□□□ -1.39
HMGB1P16-201ENST00000447155 EGFLAMQ63HQ2 1017 aa6.39□□□□□ -1.39
HMGB1P16-201ENST00000447155 SLC51AQ86UW1 340 aa6.39□□□□□ -1.39
HMGB1P16-201ENST00000447155 ZNF227Q86WZ6 799 aa6.39□□□□□ -1.39
HMGB1P16-201ENST00000447155 HOMER1Q86YM7 354 aa6.39□□□□□ -1.39
HMGB1P16-201ENST00000447155 ZBTB38Q8NAP3 1195 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P16-201ENST00000447155 LRRN4CLQ8ND94 238 aa6.39□□□□□ -1.39
HMGB1P16-201ENST00000447155 BVESQ8NE79 360 aa6.39□□□□□ -1.39
HMGB1P16-201ENST00000447155 SHKBP1Q8TBC3 707 aa6.39□□□□□ -1.39
HMGB1P16-201ENST00000447155 SYTL5Q8TDW5 730 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P16-201ENST00000447155 APPBP2Q92624 585 aa6.39□□□□□ -1.39
HMGB1P16-201ENST00000447155 PPP1R14AQ96A00 147 aa6.39□□□□□ -1.39
HMGB1P16-201ENST00000447155 ASCC2Q9H1I8 757 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P16-201ENST00000447155 KANSL2Q9H9L4 492 aa6.39□□□□□ -1.39
HMGB1P16-201ENST00000447155 MKNK2Q9HBH9 465 aa6.39□□□□□ -1.39
HMGB1P16-201ENST00000447155 CWC22Q9HCG8 908 aaKnown RBP6.39□□□□□ -1.39
HMGB1P16-201ENST00000447155 TMEM260Q9NX78 707 aa6.39□□□□□ -1.39
HMGB1P16-201ENST00000447155 A0A1W2PQU0 124 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 NOP56O00567 594 aaKnown RBP6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 SIGLEC6O43699 453 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 ADCY3O60266 1144 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 CDC45O75419 566 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 CLSTN1O94985 981 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 ITGAVP06756 1048 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 FAM153BP0C7A2 387 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 ZEB1P37275 1124 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 OXCT1P55809 520 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 TNK2Q07912 1038 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 SQSTM1Q13501 440 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 HSP90AA2PQ14568 343 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 GPAT2Q6NUI2 795 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 POMZP3Q6PJE2 187 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 ARHGAP27Q6ZUM4 889 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 TMC3Q7Z5M5 1100 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 ARHGEF39Q8N4T4 335 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 CRACR2BQ8N4Y2 399 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 ZSWIM2Q8NEG5 633 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 ADCY4Q8NFM4 1077 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 SLC26A8Q96RN1 970 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 FANCLQ9NW38 375 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 GFOD1Q9NXC2 390 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 CGGBP1Q9UFW8 167 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 AKT3Q9Y243 479 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 DIS3Q9Y2L1 958 aaKnown RBP6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 LEMD3Q9Y2U8 911 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 EMC9Q9Y3B6 208 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 PTCH2Q9Y6C5 1203 aa6.38□□□□□ -1.39
HMGB1P16-201ENST00000447155 ESYT3A0FGR9 886 aa6.37□□□□□ -1.39
HMGB1P16-201ENST00000447155 FAM155AB1AL88 458 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P16-201ENST00000447155 PROCP04070 461 aa6.37□□□□□ -1.39
HMGB1P16-201ENST00000447155 NMIQ13287 307 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P16-201ENST00000447155 RSPO4Q2I0M5 234 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P16-201ENST00000447155 TMEM67Q5HYA8 995 aa6.37□□□□□ -1.39
HMGB1P16-201ENST00000447155 NKAPLQ5M9Q1 402 aa6.37□□□□□ -1.39
HMGB1P16-201ENST00000447155 TRIM59Q8IWR1 403 aa6.37□□□□□ -1.39
HMGB1P16-201ENST00000447155 FIBCD1Q8N539 461 aa6.37□□□□□ -1.39
HMGB1P16-201ENST00000447155 ENOX1Q8TC92 643 aaKnown RBP6.37□□□□□ -1.39
HMGB1P16-201ENST00000447155 BRF1Q92994 677 aa6.37□□□□□ -1.39
HMGB1P16-201ENST00000447155 MRGPRX3Q96LB0 322 aa6.37□□□□□ -1.39
HMGB1P16-201ENST00000447155 SPOCK3Q9BQ16 436 aa6.37□□□□□ -1.39
HMGB1P16-201ENST00000447155 AARSD1Q9BTE6 412 aaKnown RBP6.37□□□□□ -1.39
HMGB1P16-201ENST00000447155 DSCC1Q9BVC3 393 aa6.37□□□□□ -1.39
HMGB1P16-201ENST00000447155 GPR62Q9BZJ7 368 aa6.37□□□□□ -1.39
HMGB1P16-201ENST00000447155 ARHGEF4Q9NR80 690 aa6.37□□□□□ -1.39
HMGB1P16-201ENST00000447155 CHST7Q9NS84 486 aa6.37□□□□□ -1.39
HMGB1P16-201ENST00000447155 SF3B6Q9Y3B4 125 aaKnown RBP6.37□□□□□ -1.39
HMGB1P16-201ENST00000447155 MSTNO14793 375 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms