RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 GDAQ9Y2T3 454 aa15.66■□□□□ 0.1
VPS52-212ENST00000445902 TBX22Q9Y458 520 aa15.66■□□□□ 0.1
VPS52-212ENST00000445902 TACC3Q9Y6A5 838 aa15.66■□□□□ 0.1
VPS52-212ENST00000445902 USP54Q70EL1 1684 aa15.66■□□□□ 0.1
VPS52-212ENST00000445902 KIAA0754O94854 1291 aa15.66■□□□□ 0.1
VPS52-212ENST00000445902 IFNAR1P17181 557 aa15.66■□□□□ 0.1
VPS52-212ENST00000445902 ATP2B2Q01814 1243 aa15.66■□□□□ 0.1
VPS52-212ENST00000445902 CCDC57Q2TAC2 916 aa15.66■□□□□ 0.1
VPS52-212ENST00000445902 CYB5RLQ6IPT4 315 aa15.66■□□□□ 0.1
VPS52-212ENST00000445902 WDR59Q6PJI9 974 aa15.66■□□□□ 0.1
VPS52-212ENST00000445902 OR8K1Q8NGG5 319 aa15.66■□□□□ 0.1
VPS52-212ENST00000445902 WASF1Q92558 559 aa15.66■□□□□ 0.1
VPS52-212ENST00000445902 GSDMAQ96QA5 445 aa15.66■□□□□ 0.1
VPS52-212ENST00000445902 CEP131Q9UPN4 1083 aa15.66■□□□□ 0.1
VPS52-212ENST00000445902 LUC7L2Q9Y383 392 aaKnown RBP15.66■□□□□ 0.1
VPS52-212ENST00000445902 ZNF330Q9Y3S2 320 aaPredicted RBP15.66■□□□□ 0.1
VPS52-212ENST00000445902 SEMA3EO15041 775 aa15.65■□□□□ 0.1
VPS52-212ENST00000445902 CXCR5P32302 372 aa15.65■□□□□ 0.1
VPS52-212ENST00000445902 RAPGEF4Q8WZA2 1011 aa15.65■□□□□ 0.1
VPS52-212ENST00000445902 RUFY1Q96T51 708 aa15.65■□□□□ 0.1
VPS52-212ENST00000445902 NLRP2Q9NX02 1062 aa15.65■□□□□ 0.1
VPS52-212ENST00000445902 XDHP47989 1333 aa15.65■□□□□ 0.1
VPS52-212ENST00000445902 TRIM75PA6NK02 468 aa15.65■□□□□ 0.1
VPS52-212ENST00000445902 NBPF26B4DH59 902 aa15.65■□□□□ 0.1
VPS52-212ENST00000445902 SETQ01105 290 aaPredicted RBP15.65■□□□□ 0.1
VPS52-212ENST00000445902 PAK1Q13153 545 aa15.65■□□□□ 0.1
VPS52-212ENST00000445902 NBPF10Q6P3W6 841 aaKnown RBP15.65■□□□□ 0.1
VPS52-212ENST00000445902 GBP6Q6ZN66 633 aa15.65■□□□□ 0.1
VPS52-212ENST00000445902 SH3RF1Q7Z6J0 888 aa15.65■□□□□ 0.1
VPS52-212ENST00000445902 NBPF15Q8N660 670 aa15.65■□□□□ 0.1
VPS52-212ENST00000445902 PRPF38AQ8NAV1 312 aaKnown RBP15.65■□□□□ 0.1
VPS52-212ENST00000445902 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.65■□□□□ 0.14e-7■■■■□ 25.8
VPS52-212ENST00000445902 CENPHQ9H3R5 247 aa15.65■□□□□ 0.1
VPS52-212ENST00000445902 ZNF532Q9HCE3 1301 aa15.65■□□□□ 0.1
VPS52-212ENST00000445902 KRT14P02533 472 aa15.64■□□□□ 0.09
VPS52-212ENST00000445902 ADD2P35612 726 aa15.64■□□□□ 0.09
VPS52-212ENST00000445902 TSR1Q2NL82 804 aaKnown RBP15.64■□□□□ 0.09
VPS52-212ENST00000445902 RNF187Q5TA31 235 aaPredicted RBP15.64■□□□□ 0.09
VPS52-212ENST00000445902 SGMS1Q86VZ5 419 aa15.64■□□□□ 0.09
VPS52-212ENST00000445902 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.64■□□□□ 0.09
VPS52-212ENST00000445902 CABS1Q96KC9 395 aa15.64■□□□□ 0.09
VPS52-212ENST00000445902 PIH1D3Q9NQM4 214 aaKnown RBP15.64■□□□□ 0.09
VPS52-212ENST00000445902 AATFQ9NY61 560 aaKnown RBP eCLIP15.64■□□□□ 0.09
VPS52-212ENST00000445902 STK36Q9NRP7 1315 aa15.64■□□□□ 0.09
VPS52-212ENST00000445902 RGPD5Q99666 1765 aa15.64■□□□□ 0.09
VPS52-212ENST00000445902 KLK7P49862 253 aa15.64■□□□□ 0.09
VPS52-212ENST00000445902 APBA1Q02410 837 aa15.64■□□□□ 0.09
VPS52-212ENST00000445902 SHISA4Q96DD7 197 aa15.64■□□□□ 0.09
VPS52-212ENST00000445902 AGPAT5Q9NUQ2 364 aa15.64■□□□□ 0.09
VPS52-212ENST00000445902 KRT86O43790 486 aa15.63■□□□□ 0.09
VPS52-212ENST00000445902 ZC3H6P61129 1189 aaKnown RBP15.63■□□□□ 0.09
VPS52-212ENST00000445902 GUCY1A3Q02108 690 aa15.63■□□□□ 0.09
VPS52-212ENST00000445902 SH3GL2Q99962 352 aa15.63■□□□□ 0.09
VPS52-212ENST00000445902 TRIM14Q14142 442 aa15.63■□□□□ 0.09
VPS52-212ENST00000445902 CHD4Q14839 1912 aa15.63■□□□□ 0.09
VPS52-212ENST00000445902 GOLGA8KD6RF30 607 aa15.63■□□□□ 0.09
VPS52-212ENST00000445902 PHKG2P15735 406 aa15.63■□□□□ 0.09
VPS52-212ENST00000445902 FNTAP49354 379 aa15.63■□□□□ 0.09
VPS52-212ENST00000445902 CCDC70Q6NSX1 233 aa15.63■□□□□ 0.09
VPS52-212ENST00000445902 CIAO1O76071 339 aa15.62■□□□□ 0.09
VPS52-212ENST00000445902 DEXIO95424 95 aa15.62■□□□□ 0.09
VPS52-212ENST00000445902 PARP1P09874 1014 aaKnown RBP15.62■□□□□ 0.09
VPS52-212ENST00000445902 KRT26Q7Z3Y9 468 aa15.62■□□□□ 0.09
VPS52-212ENST00000445902 TICAM2Q86XR7 235 aa15.62■□□□□ 0.09
VPS52-212ENST00000445902 CRACR2BQ8N4Y2 399 aaPredicted RBP15.62■□□□□ 0.09
VPS52-212ENST00000445902 RPGRIP1Q96KN7 1286 aa15.62■□□□□ 0.09
VPS52-212ENST00000445902 DONSONQ9NYP3 566 aa15.62■□□□□ 0.09
VPS52-212ENST00000445902 WDR17Q8IZU2 1322 aa15.62■□□□□ 0.09
VPS52-212ENST00000445902 CCDC196A0A1B0GTZ2 297 aa15.62■□□□□ 0.09
VPS52-212ENST00000445902 LRRC10BA6NIK2 292 aa15.62■□□□□ 0.09
VPS52-212ENST00000445902 SCP2P22307 547 aa15.62■□□□□ 0.09
VPS52-212ENST00000445902 MB21D1Q8N884 522 aa15.62■□□□□ 0.09
VPS52-212ENST00000445902 MTRQ99707 1265 aa15.62■□□□□ 0.09
VPS52-212ENST00000445902 NAPBQ9H115 298 aa15.62■□□□□ 0.09
VPS52-212ENST00000445902 RWDD2AQ9UIY3 292 aa15.62■□□□□ 0.09
VPS52-212ENST00000445902 SCN11AQ9UI33 1791 aa15.62■□□□□ 0.09
VPS52-212ENST00000445902 OPA1O60313 960 aa15.61■□□□□ 0.09
VPS52-212ENST00000445902 PRCPP42785 496 aa15.61■□□□□ 0.09
VPS52-212ENST00000445902 SEC24CP53992 1094 aa15.61■□□□□ 0.09
VPS52-212ENST00000445902 PMS1P54277 932 aaKnown RBP15.61■□□□□ 0.09
VPS52-212ENST00000445902 TCIRG1Q13488 830 aa15.61■□□□□ 0.09
VPS52-212ENST00000445902 WTAPQ15007 396 aa15.61■□□□□ 0.09
VPS52-212ENST00000445902 GIMAP7Q8NHV1 300 aa15.61■□□□□ 0.09
VPS52-212ENST00000445902 PCMTD1Q96MG8 357 aaPredicted RBP15.61■□□□□ 0.09
VPS52-212ENST00000445902 EPB41L4AQ9HCS5 686 aaPredicted RBP15.61■□□□□ 0.09
VPS52-212ENST00000445902 MEFVO15553 781 aaPredicted RBP15.61■□□□□ 0.09
VPS52-212ENST00000445902 HSF2BPO75031 334 aa15.61■□□□□ 0.09
VPS52-212ENST00000445902 ECM2O94769 699 aaPredicted RBP15.61■□□□□ 0.09
VPS52-212ENST00000445902 LIFRP42702 1097 aa15.61■□□□□ 0.09
VPS52-212ENST00000445902 SPAG1Q07617 926 aa15.61■□□□□ 0.09
VPS52-212ENST00000445902 ACTN3Q08043 901 aaPredicted RBP15.61■□□□□ 0.09
VPS52-212ENST00000445902 NFRKBQ6P4R8 1299 aa15.61■□□□□ 0.09
VPS52-212ENST00000445902 IRF2BP1Q8IU81 584 aa15.61■□□□□ 0.09
VPS52-212ENST00000445902 ZIM3Q96PE6 472 aa15.61■□□□□ 0.09
VPS52-212ENST00000445902 MLXIPQ9HAP2 919 aa15.61■□□□□ 0.09
VPS52-212ENST00000445902 LRWD1Q9UFC0 647 aa15.61■□□□□ 0.09
VPS52-212ENST00000445902 AKAP11Q9UKA4 1901 aa15.61■□□□□ 0.09
VPS52-212ENST00000445902 B4DLN1 442 aa15.6■□□□□ 0.09
VPS52-212ENST00000445902 IPO7O95373 1038 aaKnown RBP15.6■□□□□ 0.09
VPS52-212ENST00000445902 GPTP24298 496 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms