RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	PPP4C	P60510	307 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	CCZ1B	P86790	482 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	CCZ1	P86791	482 aa	Predicted RBP	7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	PPP2R3A	Q06190	1150 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	BEND6	Q5SZJ8	279 aa	Predicted RBP	7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	TBC1D9	Q6ZT07	1266 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	CEP128	Q6ZU80	1094 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	PLPP6	Q8IY26	295 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	CCDC155	Q8N6L0	562 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	RABGGTA	Q92696	567 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	ATP6V0A1	Q93050	837 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	QPCTL	Q9NXS2	382 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	CFAP45	Q9UL16	551 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	GOLGA6L4	A6NEF3	574 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	ELL2	O00472	640 aa	Predicted RBP	7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	CYP1A2	P05177	515 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	HNRNPC	P07910	306 aa	Known RBP eCLIP	7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	TROVE2	P10155	538 aa	Known RBP eCLIP	7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	PDE6C	P51160	858 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	TRIM29	Q14134	588 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	SHROOM1	Q2M3G4	852 aa	Predicted RBP	7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	RABL6	Q3YEC7	729 aa	Predicted RBP	7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	CCDC38	Q502W7	563 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	KAZN	Q674X7	775 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	LLGL2	Q6P1M3	1020 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	ARHGEF25	Q86VW2	580 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	SPATS2	Q86XZ4	545 aa	Known RBP	7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	FUK	Q8N0W3	1084 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	MAEL	Q96JY0	434 aa	Known RBP	7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	NSD3	Q9BZ95	1437 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	LNPK	Q9C0E8	428 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	ZNF180	Q9UJW8	692 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	AKAP12	Q02952	1782 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	ACE	P12821	1306 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	CPSF1	Q10570	1443 aa	Known RBP	7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	PLEKHG3	A1L390	1219 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	GOLGA8A	A7E2F4	631 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	BIN1	O00499	593 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	SHOX2	O60902	331 aa	Predicted RBP	7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	BCR	P11274	1271 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	TXLNA	P40222	546 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	PLOD1	Q02809	727 aa	Predicted RBP	7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	SLMAP	Q14BN4	828 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	BPHL	Q86WA6	291 aa	Predicted RBP	7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	CHD1L	Q86WJ1	897 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	GOLGA1	Q92805	767 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	ZNF570	Q96NI8	536 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	GPR101	Q96P66	508 aa	Predicted RBP	7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	DHX36	Q9H2U1	1008 aa	Known RBP	7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	ZNF304	Q9HCX3	659 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	TMCC3	Q9ULS5	477 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	IKBKG	Q9Y6K9	419 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	PHLPP2	Q6ZVD8	1323 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	MST1R	Q04912	1400 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	TMEM232	C9JQI7	657 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	ERCC5	P28715	1186 aa	Predicted RBP	7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	CASP8	Q14790	479 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	SMC1B	Q8NDV3	1235 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	DEPTOR	Q8TB45	409 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	NDN	Q99608	321 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	VCX3B	Q9H321	246 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	EBF2	Q9HAK2	575 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	HAUS2	Q9NVX0	235 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	TMCO1	Q9UM00	188 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	C1orf167	Q5SNV9	1468 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	ITSN1	Q15811	1721 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	ANKAR	Q7Z5J8	1434 aa		7.57	□□□□□ -1.2
TRIM6-205	ENST00000445329	DPPA5	A6NC42	116 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	MAP3K13	O43283	966 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	ATF3	P18847	181 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	ATP5J	P18859	108 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	ETF1	P62495	437 aa	Known RBP	7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	POU5F1	Q01860	360 aa	Known RBP	7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	IFFO1	Q0D2I5	559 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	P3H1	Q32P28	736 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	ESCO1	Q5FWF5	840 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	GKAP1	Q5VSY0	366 aa	Predicted RBP	7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	IGSF22	Q8N9C0	903 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	CENPT	Q96BT3	561 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	DKK3	Q9UBP4	350 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	BAIAP2L1	Q9UHR4	511 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	SH3GLB1	Q9Y371	365 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	CDHR2	Q9BYE9	1310 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	MSH6	P52701	1360 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	MON2	Q7Z3U7	1717 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329		A0A1B0GVL5	298 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	SPDYE5	A6NIY4	337 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	TBKBP1	A7MCY6	615 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	TMEM110-MUSTN1	A8MSY1	372 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	OPLAH	O14841	1288 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	MGRN1	O60291	552 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	ANP32D	O95626	131 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	MYC	P01106	439 aa	Predicted RBP	7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	PENK	P01210	267 aa	Predicted RBP	7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	TUBB4A	P04350	444 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	PMS2	P54278	862 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	KLC1	Q07866	573 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329		Q6ZUG5	572 aa		7.56	□□□□□ -1.2
TRIM6-205	ENST00000445329	KRT27	Q7Z3Y8	459 aa		7.56	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms