RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 FXR1P51114 621 aaKnown RBP eCLIP14.26□□□□□ -0.13
PDGFB-203ENST00000440375 MB21D1Q8N884 522 aa14.26□□□□□ -0.13
PDGFB-203ENST00000440375 SHCBP1Q8NEM2 672 aa14.26□□□□□ -0.13
PDGFB-203ENST00000440375 TRPV1Q8NER1 839 aa14.26□□□□□ -0.13
PDGFB-203ENST00000440375 GOPCQ9HD26 462 aa14.26□□□□□ -0.13
PDGFB-203ENST00000440375 FRMPD3Q5JV73 1810 aa14.25□□□□□ -0.13
PDGFB-203ENST00000440375 SZT2Q5T011 3432 aa14.25□□□□□ -0.13
PDGFB-203ENST00000440375 EVI5O60447 810 aa14.25□□□□□ -0.13
PDGFB-203ENST00000440375 NDUFB10O96000 172 aa14.25□□□□□ -0.13
PDGFB-203ENST00000440375 CAPN2P17655 700 aa14.25□□□□□ -0.13
PDGFB-203ENST00000440375 PDE1AP54750 535 aa14.25□□□□□ -0.13
PDGFB-203ENST00000440375 LRRFIP1Q32MZ4 808 aaKnown RBP14.25□□□□□ -0.13
PDGFB-203ENST00000440375 MFSD14CQ5VZR4 134 aa14.25□□□□□ -0.13
PDGFB-203ENST00000440375 NCAPG2Q86XI2 1143 aa14.25□□□□□ -0.13
PDGFB-203ENST00000440375 REPS2Q8NFH8 660 aa14.25□□□□□ -0.13
PDGFB-203ENST00000440375 NBPF3Q9H094 633 aa14.25□□□□□ -0.13
PDGFB-203ENST00000440375 NYAP2Q9P242 653 aa14.25□□□□□ -0.13
PDGFB-203ENST00000440375 RBM27Q9P2N5 1060 aaKnown RBP14.25□□□□□ -0.13
PDGFB-203ENST00000440375 STAP2Q9UGK3 403 aa14.25□□□□□ -0.13
PDGFB-203ENST00000440375 PPP1R9AQ9ULJ8 1098 aa14.25□□□□□ -0.13
PDGFB-203ENST00000440375 ADAMTS5Q9UNA0 930 aa14.25□□□□□ -0.13
PDGFB-203ENST00000440375 NR2E3Q9Y5X4 410 aa14.25□□□□□ -0.13
PDGFB-203ENST00000440375 LAMA3Q16787 3333 aa14.25□□□□□ -0.13
PDGFB-203ENST00000440375 COL11A1P12107 1806 aaPredicted RBP14.25□□□□□ -0.13
PDGFB-203ENST00000440375 PLIN4Q96Q06 1357 aa14.24□□□□□ -0.13
PDGFB-203ENST00000440375 VWA5AO00534 786 aa14.24□□□□□ -0.13
PDGFB-203ENST00000440375 CYBAP13498 195 aa14.24□□□□□ -0.13
PDGFB-203ENST00000440375 PPARAQ07869 468 aa14.24□□□□□ -0.13
PDGFB-203ENST00000440375 VPS53Q5VIR6 699 aa14.24□□□□□ -0.13
PDGFB-203ENST00000440375 DPP9Q86TI2 863 aa14.24□□□□□ -0.13
PDGFB-203ENST00000440375 C7orf61Q8IZ16 206 aa14.24□□□□□ -0.13
PDGFB-203ENST00000440375 LRRC47Q8N1G4 583 aaKnown RBP14.24□□□□□ -0.13
PDGFB-203ENST00000440375 CEP95Q96GE4 821 aa14.24□□□□□ -0.13
PDGFB-203ENST00000440375 LNPKQ9C0E8 428 aa14.24□□□□□ -0.13
PDGFB-203ENST00000440375 NAPBQ9H115 298 aa14.24□□□□□ -0.13
PDGFB-203ENST00000440375 PRO3102Q9H379 93 aa14.24□□□□□ -0.13
PDGFB-203ENST00000440375 C11orf49Q9H6J7 331 aa14.24□□□□□ -0.13
PDGFB-203ENST00000440375 ZNF214Q9UL59 606 aaPredicted RBP14.24□□□□□ -0.13
PDGFB-203ENST00000440375 TACC3Q9Y6A5 838 aa14.24□□□□□ -0.13
PDGFB-203ENST00000440375 F5H6K3 240 aa14.23□□□□□ -0.13
PDGFB-203ENST00000440375 COL6A1P12109 1028 aa14.23□□□□□ -0.13
PDGFB-203ENST00000440375 KLRC3Q07444 240 aa14.23□□□□□ -0.13
PDGFB-203ENST00000440375 FAM47AQ5JRC9 791 aa14.23□□□□□ -0.13
PDGFB-203ENST00000440375 NACAP1Q9BZK3 213 aa14.23□□□□□ -0.13
PDGFB-203ENST00000440375 MROH8Q9H579 483 aa14.23□□□□□ -0.13
PDGFB-203ENST00000440375 INCENPQ9NQS7 918 aa14.23□□□□□ -0.13
PDGFB-203ENST00000440375 MTMR4Q9NYA4 1195 aa14.23□□□□□ -0.13
PDGFB-203ENST00000440375 CLIP2Q9UDT6 1046 aa14.23□□□□□ -0.13
PDGFB-203ENST00000440375 ZBTB47Q9UFB7 747 aaPredicted RBP14.23□□□□□ -0.13
PDGFB-203ENST00000440375 A0A0D9SFI3 127 aa14.22□□□□□ -0.13
PDGFB-203ENST00000440375 STRNO43815 780 aa14.22□□□□□ -0.13
PDGFB-203ENST00000440375 PGK2P07205 417 aa14.22□□□□□ -0.13
PDGFB-203ENST00000440375 CNGA1P29973 690 aa14.22□□□□□ -0.13
PDGFB-203ENST00000440375 CTDSPL2Q05D32 466 aa14.22□□□□□ -0.13
PDGFB-203ENST00000440375 OLFML2BQ68BL8 750 aa14.22□□□□□ -0.13
PDGFB-203ENST00000440375 RIOX2Q8IUF8 465 aa14.22□□□□□ -0.13
PDGFB-203ENST00000440375 ZNF444Q8N0Y2 327 aaPredicted RBP14.22□□□□□ -0.13
PDGFB-203ENST00000440375 ABRAQ8N0Z2 381 aa14.22□□□□□ -0.13
PDGFB-203ENST00000440375 EXOC6Q8TAG9 804 aa14.22□□□□□ -0.13
PDGFB-203ENST00000440375 EVI5LQ96CN4 794 aa14.22□□□□□ -0.13
PDGFB-203ENST00000440375 FAM227BQ96M60 508 aa14.22□□□□□ -0.13
PDGFB-203ENST00000440375 SLF1Q9BQI6 1058 aa14.22□□□□□ -0.13
PDGFB-203ENST00000440375 DDX20Q9UHI6 824 aaKnown RBP14.22□□□□□ -0.13
PDGFB-203ENST00000440375 ZMYND8Q9ULU4 1186 aaPredicted RBP14.22□□□□□ -0.13
PDGFB-203ENST00000440375 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.22□□□□□ -0.13
PDGFB-203ENST00000440375 IGHDP01880 384 aa14.21□□□□□ -0.13
PDGFB-203ENST00000440375 STAT3P40763 770 aa14.21□□□□□ -0.13
PDGFB-203ENST00000440375 PRAMEF19Q5SWL8 479 aa14.21□□□□□ -0.13
PDGFB-203ENST00000440375 ANO1Q5XXA6 986 aa14.21□□□□□ -0.13
PDGFB-203ENST00000440375 B4GALNT3Q6L9W6 998 aa14.21□□□□□ -0.13
PDGFB-203ENST00000440375 SMC5Q8IY18 1101 aa14.21□□□□□ -0.13
PDGFB-203ENST00000440375 NEDD1Q8NHV4 660 aa14.21□□□□□ -0.13
PDGFB-203ENST00000440375 MAML3Q96JK9 1138 aa14.21□□□□□ -0.13
PDGFB-203ENST00000440375 ZNF287Q9HBT7 754 aa14.21□□□□□ -0.13
PDGFB-203ENST00000440375 MYH4Q9Y623 1939 aa14.21□□□□□ -0.14
PDGFB-203ENST00000440375 NMT2O60551 498 aa14.2□□□□□ -0.14
PDGFB-203ENST00000440375 SLC25A27O95847 323 aa14.2□□□□□ -0.14
PDGFB-203ENST00000440375 TTLL1O95922 423 aa14.2□□□□□ -0.14
PDGFB-203ENST00000440375 TSPY3P0CV98 308 aa14.2□□□□□ -0.14
PDGFB-203ENST00000440375 TSPY8P0CW00 308 aa14.2□□□□□ -0.14
PDGFB-203ENST00000440375 FCER1AP12319 257 aa14.2□□□□□ -0.14
PDGFB-203ENST00000440375 SYN1P17600 705 aa14.2□□□□□ -0.14
PDGFB-203ENST00000440375 TFAP4Q01664 338 aa14.2□□□□□ -0.14
PDGFB-203ENST00000440375 PDE4BQ07343 736 aa14.2□□□□□ -0.14
PDGFB-203ENST00000440375 LRRC26Q2I0M4 334 aa14.2□□□□□ -0.14
PDGFB-203ENST00000440375 RASGRP2Q7LDG7 609 aa14.2□□□□□ -0.14
PDGFB-203ENST00000440375 ZNF589Q86UQ0 364 aaPredicted RBP14.2□□□□□ -0.14
PDGFB-203ENST00000440375 MKL1Q969V6 931 aa14.2□□□□□ -0.14
PDGFB-203ENST00000440375 CHMP4CQ96CF2 233 aa14.2□□□□□ -0.14
PDGFB-203ENST00000440375 MMP19Q99542 508 aa14.2□□□□□ -0.14
PDGFB-203ENST00000440375 RIPK3Q9Y572 518 aa14.2□□□□□ -0.14
PDGFB-203ENST00000440375 NMIQ13287 307 aaPredicted RBP14.19□□□□□ -0.14
PDGFB-203ENST00000440375 SNRNP48Q6IEG0 339 aaKnown RBP14.19□□□□□ -0.14
PDGFB-203ENST00000440375 GMCL1P1Q8NEA9 526 aa14.19□□□□□ -0.14
PDGFB-203ENST00000440375 KIFC2Q96AC6 838 aa14.19□□□□□ -0.14
PDGFB-203ENST00000440375 TEX13BQ9BXU2 312 aa14.19□□□□□ -0.14
PDGFB-203ENST00000440375 MSCO60682 206 aa14.18□□□□□ -0.14
PDGFB-203ENST00000440375 SLC3A2P08195 630 aaKnown RBP14.18□□□□□ -0.14
PDGFB-203ENST00000440375 KCTD2Q14681 263 aa14.18□□□□□ -0.14
PDGFB-203ENST00000440375 ZNF792Q3KQV3 632 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms