RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 PAGR1Q9BTK6 254 aa20.88■□□□□ 0.93
CCDC188-201ENST00000439765 RNF41Q9H4P4 317 aaPredicted RBP20.88■□□□□ 0.93
CCDC188-201ENST00000439765 TXNRD2Q9NNW7 524 aa20.88■□□□□ 0.93
CCDC188-201ENST00000439765 BIN2Q9UBW5 565 aaPredicted RBP20.88■□□□□ 0.93
CCDC188-201ENST00000439765 STX8Q9UNK0 236 aa20.88■□□□□ 0.93
CCDC188-201ENST00000439765 WDR46O15213 610 aaKnown RBP20.88■□□□□ 0.93
CCDC188-201ENST00000439765 SAMD1Q6SPF0 538 aaPredicted RBP20.88■□□□□ 0.93
CCDC188-201ENST00000439765 RNF208Q9H0X6 261 aa20.88■□□□□ 0.93
CCDC188-201ENST00000439765 IL17RBQ9NRM6 502 aa20.88■□□□□ 0.93
CCDC188-201ENST00000439765 SPDYE16A6NNV3 312 aaPredicted RBP20.87■□□□□ 0.93
CCDC188-201ENST00000439765 PCP11498 1178 aaKnown RBP20.87■□□□□ 0.93
CCDC188-201ENST00000439765 ELNP15502 786 aa20.87■□□□□ 0.93
CCDC188-201ENST00000439765 FAM83BQ5T0W9 1011 aa20.87■□□□□ 0.93
CCDC188-201ENST00000439765 GTF3C2Q8WUA4 911 aaPredicted RBP20.87■□□□□ 0.93
CCDC188-201ENST00000439765 NUP88Q99567 741 aaPredicted RBP20.87■□□□□ 0.93
CCDC188-201ENST00000439765 FLOT1O75955 427 aa20.86■□□□□ 0.93
CCDC188-201ENST00000439765 NDUFB10O96000 172 aa20.86■□□□□ 0.93
CCDC188-201ENST00000439765 INHAP05111 366 aa20.86■□□□□ 0.93
CCDC188-201ENST00000439765 POTEEQ6S8J3 1075 aa20.86■□□□□ 0.93
CCDC188-201ENST00000439765 UNC93B1Q9H1C4 597 aa20.86■□□□□ 0.93
CCDC188-201ENST00000439765 ALPK3Q96L96 1907 aa20.86■□□□□ 0.93
CCDC188-201ENST00000439765 B4E1Z4 1266 aa20.85■□□□□ 0.93
CCDC188-201ENST00000439765 F5H6K3 240 aa20.85■□□□□ 0.93
CCDC188-201ENST00000439765 KLRC3Q07444 240 aa20.85■□□□□ 0.93
CCDC188-201ENST00000439765 C8orf34Q49A92 452 aa20.85■□□□□ 0.93
CCDC188-201ENST00000439765 CASC1Q6TDU7 716 aa20.85■□□□□ 0.93
CCDC188-201ENST00000439765 KIAA1211Q6ZU35 1233 aa20.85■□□□□ 0.93
CCDC188-201ENST00000439765 ESR2Q92731 530 aa20.85■□□□□ 0.93
CCDC188-201ENST00000439765 CHMP4CQ96CF2 233 aa20.85■□□□□ 0.93
CCDC188-201ENST00000439765 RBPJLQ9UBG7 517 aa20.85■□□□□ 0.93
CCDC188-201ENST00000439765 GJD2Q9UKL4 321 aa20.85■□□□□ 0.93
CCDC188-201ENST00000439765 U3KPZ7 1027 aaPredicted RBP20.85■□□□□ 0.93
CCDC188-201ENST00000439765 TRIOBPQ9H2D6 2365 aa20.85■□□□□ 0.93
CCDC188-201ENST00000439765 KDM4AO75164 1064 aa20.84■□□□□ 0.93
CCDC188-201ENST00000439765 CYP21A2P08686 494 aa20.84■□□□□ 0.93
CCDC188-201ENST00000439765 ERVK-9P63128 1117 aa20.84■□□□□ 0.93
CCDC188-201ENST00000439765 ERVK-24P63145 666 aa20.84■□□□□ 0.93
CCDC188-201ENST00000439765 UBE2Q1Q7Z7E8 422 aa20.84■□□□□ 0.93
CCDC188-201ENST00000439765 GPRC5AQ8NFJ5 357 aa20.84■□□□□ 0.93
CCDC188-201ENST00000439765 U2AF1L4Q8WU68 220 aaKnown RBP20.84■□□□□ 0.93
CCDC188-201ENST00000439765 ANO2Q9NQ90 1003 aa20.84■□□□□ 0.93
CCDC188-201ENST00000439765 FBXO28Q9NVF7 368 aa20.84■□□□□ 0.93
CCDC188-201ENST00000439765 RBM8AQ9Y5S9 174 aaKnown RBP20.84■□□□□ 0.93
CCDC188-201ENST00000439765 CAPN2P17655 700 aa20.83■□□□□ 0.93
CCDC188-201ENST00000439765 COG2Q14746 738 aa20.83■□□□□ 0.93
CCDC188-201ENST00000439765 RASGRP2Q7LDG7 609 aa20.83■□□□□ 0.93
CCDC188-201ENST00000439765 MKL1Q969V6 931 aa20.83■□□□□ 0.93
CCDC188-201ENST00000439765 ZKSCAN3Q9BRR0 538 aa20.83■□□□□ 0.93
CCDC188-201ENST00000439765 LSG1Q9H089 658 aaKnown RBP20.83■□□□□ 0.93
CCDC188-201ENST00000439765 PAK6Q9NQU5 681 aaPredicted RBP20.83■□□□□ 0.93
CCDC188-201ENST00000439765 MTMR7Q9Y216 660 aa20.83■□□□□ 0.93
CCDC188-201ENST00000439765 TAF6LQ9Y6J9 622 aa20.83■□□□□ 0.93
CCDC188-201ENST00000439765 FRMPD3Q5JV73 1810 aa20.83■□□□□ 0.92
CCDC188-201ENST00000439765 SGPL1O95470 568 aa20.82■□□□□ 0.92
CCDC188-201ENST00000439765 PPP4R3BQ5MIZ7 849 aa20.82■□□□□ 0.92
CCDC188-201ENST00000439765 LBX2Q6XYB7 198 aa20.82■□□□□ 0.92
CCDC188-201ENST00000439765 GMCL1P1Q8NEA9 526 aa20.82■□□□□ 0.92
CCDC188-201ENST00000439765 MAP4K1Q92918 833 aa20.82■□□□□ 0.92
CCDC188-201ENST00000439765 ATG4CQ96DT6 458 aa20.82■□□□□ 0.92
CCDC188-201ENST00000439765 ISY1Q9ULR0 285 aaKnown RBP20.82■□□□□ 0.92
CCDC188-201ENST00000439765 SYNPO2Q9UMS6 1093 aa20.82■□□□□ 0.92
CCDC188-201ENST00000439765 CNMDO75829 334 aa20.81■□□□□ 0.92
CCDC188-201ENST00000439765 HMGCRP04035 888 aa20.81■□□□□ 0.92
CCDC188-201ENST00000439765 Q3C1V9 767 aa20.81■□□□□ 0.92
CCDC188-201ENST00000439765 SLFN13Q68D06 897 aa20.81■□□□□ 0.92
CCDC188-201ENST00000439765 BTBD7Q9P203 1132 aa20.81■□□□□ 0.92
CCDC188-201ENST00000439765 RABGAP1Q9Y3P9 1069 aa20.81■□□□□ 0.92
CCDC188-201ENST00000439765 ZNFX1Q9P2E3 1918 aaKnown RBP20.81■□□□□ 0.92
CCDC188-201ENST00000439765 MAPK4P31152 587 aa20.81■□□□□ 0.92
CCDC188-201ENST00000439765 DSG3P32926 999 aa20.81■□□□□ 0.92
CCDC188-201ENST00000439765 SOCS4Q8WXH5 440 aa20.81■□□□□ 0.92
CCDC188-201ENST00000439765 KRT23Q9C075 422 aa20.81■□□□□ 0.92
CCDC188-201ENST00000439765 PORCNQ9H237 461 aa20.81■□□□□ 0.92
CCDC188-201ENST00000439765 CNNM2Q9H8M5 875 aa20.81■□□□□ 0.92
CCDC188-201ENST00000439765 HOXC10Q9NYD6 342 aa20.81■□□□□ 0.92
CCDC188-201ENST00000439765 TCP11L1Q9NUJ3 509 aa20.8■□□□□ 0.92
CCDC188-201ENST00000439765 PPP1R9AQ9ULJ8 1098 aa20.8■□□□□ 0.92
CCDC188-201ENST00000439765 NOVP48745 357 aa20.79■□□□□ 0.92
CCDC188-201ENST00000439765 RCSD1Q6JBY9 416 aa20.79■□□□□ 0.92
CCDC188-201ENST00000439765 IQCA1Q86XH1 822 aa20.79■□□□□ 0.92
CCDC188-201ENST00000439765 CCAR1Q8IX12 1150 aaKnown RBP20.79■□□□□ 0.92
CCDC188-201ENST00000439765 NUDT12Q9BQG2 462 aa20.79■□□□□ 0.92
CCDC188-201ENST00000439765 SLF1Q9BQI6 1058 aa20.79■□□□□ 0.92
CCDC188-201ENST00000439765 TMEM47Q9BQJ4 181 aa20.79■□□□□ 0.92
CCDC188-201ENST00000439765 BACH2Q9BYV9 841 aa20.79■□□□□ 0.92
CCDC188-201ENST00000439765 CRISPLD2Q9H0B8 497 aa20.79■□□□□ 0.92
CCDC188-201ENST00000439765 ZSWIM5Q9P217 1185 aa20.79■□□□□ 0.92
CCDC188-201ENST00000439765 ZNF236Q9UL36 1845 aa20.79■□□□□ 0.92
CCDC188-201ENST00000439765 FARP2O94887 1054 aaPredicted RBP20.78■□□□□ 0.92
CCDC188-201ENST00000439765 TOP1P11387 765 aaKnown RBP20.78■□□□□ 0.92
CCDC188-201ENST00000439765 BMP3P12645 472 aa20.78■□□□□ 0.92
CCDC188-201ENST00000439765 XRCC5P13010 732 aaKnown RBP20.78■□□□□ 0.92
CCDC188-201ENST00000439765 MCCP23508 829 aa20.78■□□□□ 0.92
CCDC188-201ENST00000439765 SLC1A4P43007 532 aa20.78■□□□□ 0.92
CCDC188-201ENST00000439765 TRDNQ13061 729 aa20.78■□□□□ 0.92
CCDC188-201ENST00000439765 PLS1Q14651 629 aa20.78■□□□□ 0.92
CCDC188-201ENST00000439765 WDR78Q5VTH9 848 aa20.78■□□□□ 0.92
CCDC188-201ENST00000439765 STOX1Q6ZVD7 989 aa20.78■□□□□ 0.92
CCDC188-201ENST00000439765 TRIB2Q92519 343 aa20.78■□□□□ 0.92
CCDC188-201ENST00000439765 DEFB118Q96PH6 123 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms